RNA–Protein interactions for RNA: ENST00000591107.6

NPC1-212, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 3

Gene NPC1, Length 890 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-212ENST00000591107 DUOX1Q9NRD9 1551 aa17.35■□□□□ 0.37
NPC1-212ENST00000591107 PPP1R42Q7Z4L9 355 aa17.34■□□□□ 0.37
NPC1-212ENST00000591107 REM2Q8IYK8 340 aaPredicted RBP17.34■□□□□ 0.37
NPC1-212ENST00000591107 CNTROBQ8N137 903 aa17.34■□□□□ 0.37
NPC1-212ENST00000591107 CRAMP1Q96RY5 1269 aa17.34■□□□□ 0.37
NPC1-212ENST00000591107 PNNQ9H307 717 aaKnown RBP17.34■□□□□ 0.37
NPC1-212ENST00000591107 PARP10Q53GL7 1025 aa17.33■□□□□ 0.36
NPC1-212ENST00000591107 NIM1KQ8IY84 436 aa17.33■□□□□ 0.36
NPC1-212ENST00000591107 CHPF2Q9P2E5 772 aa17.33■□□□□ 0.36
NPC1-212ENST00000591107 MYBBP1AQ9BQG0 1328 aaKnown RBP17.32■□□□□ 0.36
NPC1-212ENST00000591107 TRAF5O00463 557 aa17.32■□□□□ 0.36
NPC1-212ENST00000591107 LMOD1P29536 600 aaPredicted RBP17.32■□□□□ 0.36
NPC1-212ENST00000591107 RALBP1Q15311 655 aa17.32■□□□□ 0.36
NPC1-212ENST00000591107 CC2D2BQ6DHV5 1058 aa17.32■□□□□ 0.36
NPC1-212ENST00000591107 NLRP10Q86W26 655 aa17.32■□□□□ 0.36
NPC1-212ENST00000591107 NLRP3Q96P20 1036 aa17.32■□□□□ 0.36
NPC1-212ENST00000591107 LRRC37AA6NMS7 1700 aa17.31■□□□□ 0.36
NPC1-212ENST00000591107 PNMA8AQ86V59 439 aaPredicted RBP17.31■□□□□ 0.36
NPC1-212ENST00000591107 ABT1Q9ULW3 272 aaKnown RBP17.31■□□□□ 0.36
NPC1-212ENST00000591107 TRIM35Q9UPQ4 493 aa17.31■□□□□ 0.36
NPC1-212ENST00000591107 ATP6V0A2Q9Y487 856 aa17.31■□□□□ 0.36
NPC1-212ENST00000591107 LMOD3Q0VAK6 560 aa17.3■□□□□ 0.36
NPC1-212ENST00000591107 GRM1Q13255 1194 aa17.3■□□□□ 0.36
NPC1-212ENST00000591107 TRMT112Q9UI30 125 aaKnown RBP17.3■□□□□ 0.36
NPC1-212ENST00000591107 THSD7BQ9C0I4 1608 aa17.29■□□□□ 0.36
NPC1-212ENST00000591107 SHTN1A0MZ66 631 aa17.29■□□□□ 0.36
NPC1-212ENST00000591107 RTL5Q5HYW3 569 aaPredicted RBP17.29■□□□□ 0.36
NPC1-212ENST00000591107 ATP5J2-PTCD1G3V325 749 aa17.28■□□□□ 0.36
NPC1-212ENST00000591107 GMPSP49915 693 aaPredicted RBP17.28■□□□□ 0.36
NPC1-212ENST00000591107 CXCL9Q07325 125 aa17.28■□□□□ 0.36
NPC1-212ENST00000591107 TCIRG1Q13488 830 aa17.28■□□□□ 0.36
NPC1-212ENST00000591107 SLC10A5Q5PT55 438 aa17.28■□□□□ 0.36
NPC1-212ENST00000591107 HDGFL1Q5TGJ6 251 aa17.28■□□□□ 0.36
NPC1-212ENST00000591107 DPP8Q6V1X1 898 aaPredicted RBP17.28■□□□□ 0.36
NPC1-212ENST00000591107 PAXIP1Q6ZW49 1069 aaPredicted RBP17.28■□□□□ 0.36
NPC1-212ENST00000591107 DDX21Q9NR30 783 aaKnown RBP eCLIP17.28■□□□□ 0.36
NPC1-212ENST00000591107 SH3TC1Q8TE82 1336 aa17.27■□□□□ 0.36
NPC1-212ENST00000591107 TRPM7Q96QT4 1865 aa17.27■□□□□ 0.36
NPC1-212ENST00000591107 RASSF10A6NK89 507 aa17.27■□□□□ 0.36
NPC1-212ENST00000591107 CHL1O00533 1208 aa17.27■□□□□ 0.36
NPC1-212ENST00000591107 RAD17O75943 681 aa17.27■□□□□ 0.36
NPC1-212ENST00000591107 WDR43Q15061 677 aaKnown RBP eCLIP17.27■□□□□ 0.36
NPC1-212ENST00000591107 ADAMTS8Q9UP79 889 aa17.27■□□□□ 0.36
NPC1-212ENST00000591107 LBX1P52954 281 aa17.26■□□□□ 0.35
NPC1-212ENST00000591107 GRAPQ13588 217 aa17.26■□□□□ 0.35
NPC1-212ENST00000591107 DEFB115Q30KQ5 88 aa17.26■□□□□ 0.35
NPC1-212ENST00000591107 HSP90AB3PQ58FF7 597 aa17.26■□□□□ 0.35
NPC1-212ENST00000591107 GRAPLQ8TC17 118 aaPredicted RBP17.26■□□□□ 0.35
NPC1-212ENST00000591107 AIDAQ96BJ3 306 aa17.26■□□□□ 0.35
NPC1-212ENST00000591107 RUNDC1Q96C34 613 aa17.26■□□□□ 0.35
NPC1-212ENST00000591107 GPR101Q96P66 508 aaPredicted RBP17.26■□□□□ 0.35
NPC1-212ENST00000591107 BABAM1Q9NWV8 329 aa17.26■□□□□ 0.35
NPC1-212ENST00000591107 GPRC5DQ9NZD1 345 aa17.26■□□□□ 0.35
NPC1-212ENST00000591107 WDR33Q9C0J8 1336 aaKnown RBP17.25■□□□□ 0.35
NPC1-212ENST00000591107 YDJCA8MPS7 323 aa17.25■□□□□ 0.35
NPC1-212ENST00000591107 CYP4F22Q6NT55 531 aa17.25■□□□□ 0.35
NPC1-212ENST00000591107 DDX46Q7L014 1031 aaKnown RBP17.25■□□□□ 0.35
NPC1-212ENST00000591107 MPNDQ8N594 471 aa17.25■□□□□ 0.35
NPC1-212ENST00000591107 TRPM4Q8TD43 1214 aa17.25■□□□□ 0.35
NPC1-212ENST00000591107 CELF1Q92879 486 aaKnown RBP17.25■□□□□ 0.35
NPC1-212ENST00000591107 FAM89AQ96GI7 184 aa17.25■□□□□ 0.35
NPC1-212ENST00000591107 PRR29P0C7W0 189 aa17.24■□□□□ 0.35
NPC1-212ENST00000591107 DLK2Q6UY11 383 aa17.24■□□□□ 0.35
NPC1-212ENST00000591107 RTFDC1Q9BY42 306 aaPredicted RBP17.24■□□□□ 0.35
NPC1-212ENST00000591107 GLIS2Q9BZE0 524 aaPredicted RBP17.24■□□□□ 0.35
NPC1-212ENST00000591107 TMX4Q9H1E5 349 aaPredicted RBP17.24■□□□□ 0.35
NPC1-212ENST00000591107 MBIPQ9NS73 344 aa17.24■□□□□ 0.35
NPC1-212ENST00000591107 WBP1LQ9NX94 342 aa17.24■□□□□ 0.35
NPC1-212ENST00000591107 ZNRF3Q9ULT6 936 aa17.24■□□□□ 0.35
NPC1-212ENST00000591107 HSPA8P11142 646 aaKnown RBP17.23■□□□□ 0.35
NPC1-212ENST00000591107 CTCFP49711 727 aaPredicted RBP17.23■□□□□ 0.35
NPC1-212ENST00000591107 KIAA2012Q0VF49 1180 aa17.23■□□□□ 0.35
NPC1-212ENST00000591107 GRIPAP1Q4V328 841 aa17.23■□□□□ 0.35
NPC1-212ENST00000591107 CST9Q5W186 159 aa17.23■□□□□ 0.35
NPC1-212ENST00000591107 USP50Q70EL3 339 aaPredicted RBP17.23■□□□□ 0.35
NPC1-212ENST00000591107 SP8Q8IXZ3 490 aa17.23■□□□□ 0.35
NPC1-212ENST00000591107 TSKSQ9UJT2 592 aa17.23■□□□□ 0.35
NPC1-212ENST00000591107 DUSP27Q5VZP5 1158 aa17.22■□□□□ 0.35
NPC1-212ENST00000591107 CIAPIN1Q6FI81 312 aa17.22■□□□□ 0.35
NPC1-212ENST00000591107 SUPT20HQ8NEM7 779 aa17.22■□□□□ 0.35
NPC1-212ENST00000591107 PLBD2Q8NHP8 589 aa17.22■□□□□ 0.35
NPC1-212ENST00000591107 CAPNS2Q96L46 248 aa17.22■□□□□ 0.35
NPC1-212ENST00000591107 ISCA1Q9BUE6 129 aa17.22■□□□□ 0.35
NPC1-212ENST00000591107 BCL2L13Q9BXK5 485 aa17.22■□□□□ 0.35
NPC1-212ENST00000591107 ZNF408Q9H9D4 720 aa17.22■□□□□ 0.35
NPC1-212ENST00000591107 DBNDD1Q9H9R9 158 aa17.22■□□□□ 0.35
NPC1-212ENST00000591107 ADARB2Q9NS39 739 aaKnown RBP17.22■□□□□ 0.35
NPC1-212ENST00000591107 ELL2O00472 640 aaPredicted RBP17.21■□□□□ 0.35
NPC1-212ENST00000591107 RIMBP2O15034 1052 aa17.21■□□□□ 0.35
NPC1-212ENST00000591107 AOC2O75106 756 aa17.21■□□□□ 0.35
NPC1-212ENST00000591107 BBOX1O75936 387 aa17.21■□□□□ 0.35
NPC1-212ENST00000591107 ECM2O94769 699 aaPredicted RBP17.21■□□□□ 0.35
NPC1-212ENST00000591107 HIRAP54198 1017 aaPredicted RBP17.21■□□□□ 0.35
NPC1-212ENST00000591107 JARID2Q92833 1246 aaPredicted RBP17.21■□□□□ 0.35
NPC1-212ENST00000591107 CELF2O95319 508 aaKnown RBP17.2■□□□□ 0.34
NPC1-212ENST00000591107 GPSM2P81274 684 aa17.2■□□□□ 0.34
NPC1-212ENST00000591107 ANKRD13DQ6ZTN6 518 aa17.2■□□□□ 0.34
NPC1-212ENST00000591107 PHAXQ9H814 394 aaKnown RBP17.2■□□□□ 0.34
NPC1-212ENST00000591107 SCN9AQ15858 1988 aa17.19■□□□□ 0.34
NPC1-212ENST00000591107 ANP32CO43423 234 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms