RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 SP8Q8IXZ3 490 aa23.18■■□□□ 1.3
VAT1-208ENST00000590924 DUOX1Q9NRD9 1551 aa23.18■■□□□ 1.3
VAT1-208ENST00000590924 LMOD1P29536 600 aaPredicted RBP23.17■■□□□ 1.3
VAT1-208ENST00000590924 SCNN1DP51172 638 aa23.17■■□□□ 1.3
VAT1-208ENST00000590924 GNAI1P63096 354 aa23.17■■□□□ 1.3
VAT1-208ENST00000590924 GRAPQ13588 217 aa23.17■■□□□ 1.3
VAT1-208ENST00000590924 AOC3Q16853 763 aa23.17■■□□□ 1.3
VAT1-208ENST00000590924 GRAPLQ8TC17 118 aaPredicted RBP23.17■■□□□ 1.3
VAT1-208ENST00000590924 CLEC11AQ9Y240 323 aa23.17■■□□□ 1.3
VAT1-208ENST00000590924 CNTNAP1P78357 1384 aa23.16■■□□□ 1.3
VAT1-208ENST00000590924 HSPA1AP0DMV8 641 aaKnown RBP23.16■■□□□ 1.3
VAT1-208ENST00000590924 HSPA1BP0DMV9 641 aaKnown RBP23.16■■□□□ 1.3
VAT1-208ENST00000590924 WDR63Q8IWG1 891 aa23.16■■□□□ 1.3
VAT1-208ENST00000590924 DPP8Q6V1X1 898 aaPredicted RBP23.15■■□□□ 1.3
VAT1-208ENST00000590924 TMC4Q7Z404 712 aa23.15■■□□□ 1.3
VAT1-208ENST00000590924 MKRN1Q9UHC7 482 aaKnown RBP23.15■■□□□ 1.3
VAT1-208ENST00000590924 MYH3P11055 1940 aa23.15■■□□□ 1.3
VAT1-208ENST00000590924 CACNA1FO60840 1977 aa23.14■■□□□ 1.3
VAT1-208ENST00000590924 IL16Q14005 1332 aa23.14■■□□□ 1.3
VAT1-208ENST00000590924 TMEM88BA6NKF7 163 aa23.14■■□□□ 1.29
VAT1-208ENST00000590924 TRIM28Q13263 835 aaKnown RBP23.14■■□□□ 1.29
VAT1-208ENST00000590924 CNTROBQ8N137 903 aa23.14■■□□□ 1.29
VAT1-208ENST00000590924 MPNDQ8N594 471 aa23.14■■□□□ 1.29
VAT1-208ENST00000590924 COL4A1P02462 1669 aa23.13■■□□□ 1.29
VAT1-208ENST00000590924 ATP5J2-PTCD1G3V325 749 aa23.13■■□□□ 1.29
VAT1-208ENST00000590924 COL13A1Q5TAT6 717 aaPredicted RBP23.13■■□□□ 1.29
VAT1-208ENST00000590924 MAP1SQ66K74 1059 aaPredicted RBP23.13■■□□□ 1.29
VAT1-208ENST00000590924 FAM89AQ96GI7 184 aa23.13■■□□□ 1.29
VAT1-208ENST00000590924 ZNRF3Q9ULT6 936 aa23.13■■□□□ 1.29
VAT1-208ENST00000590924 EPS15P42566 896 aa23.12■■□□□ 1.29
VAT1-208ENST00000590924 KIAA2012Q0VF49 1180 aa23.12■■□□□ 1.29
VAT1-208ENST00000590924 SF3B3Q15393 1217 aaKnown RBP23.12■■□□□ 1.29
VAT1-208ENST00000590924 ZNF428Q96B54 188 aa23.12■■□□□ 1.29
VAT1-208ENST00000590924 CXCL9Q07325 125 aa23.11■■□□□ 1.29
VAT1-208ENST00000590924 USP50Q70EL3 339 aaPredicted RBP23.11■■□□□ 1.29
VAT1-208ENST00000590924 GOLGA2Q08379 1002 aa23.1■■□□□ 1.29
VAT1-208ENST00000590924 RIC3Q7Z5B4 369 aa23.1■■□□□ 1.29
VAT1-208ENST00000590924 GPRC5DQ9NZD1 345 aa23.1■■□□□ 1.29
VAT1-208ENST00000590924 SALL2Q9Y467 1007 aaPredicted RBP23.1■■□□□ 1.29
VAT1-208ENST00000590924 ZNF521Q96K83 1311 aa23.09■■□□□ 1.29
VAT1-208ENST00000590924 ELL2O00472 640 aaPredicted RBP23.09■■□□□ 1.29
VAT1-208ENST00000590924 PHAXQ9H814 394 aaKnown RBP23.09■■□□□ 1.29
VAT1-208ENST00000590924 CDHR2Q9BYE9 1310 aa23.08■■□□□ 1.29
VAT1-208ENST00000590924 C8orf58Q8NAV2 365 aa23.08■■□□□ 1.29
VAT1-208ENST00000590924 CHMP4AQ9BY43 222 aa23.08■■□□□ 1.29
VAT1-208ENST00000590924 PSME4Q14997 1843 aa23.08■■□□□ 1.28
VAT1-208ENST00000590924 POLR2AP24928 1970 aaKnown RBP23.07■■□□□ 1.28
VAT1-208ENST00000590924 IRS4O14654 1257 aaPredicted RBP23.07■■□□□ 1.28
VAT1-208ENST00000590924 RTL5Q5HYW3 569 aaPredicted RBP23.07■■□□□ 1.28
VAT1-208ENST00000590924 CIAPIN1Q6FI81 312 aa23.07■■□□□ 1.28
VAT1-208ENST00000590924 CELF1Q92879 486 aaKnown RBP23.07■■□□□ 1.28
VAT1-208ENST00000590924 ADARB2Q9NS39 739 aaKnown RBP23.07■■□□□ 1.28
VAT1-208ENST00000590924 SPEF2Q9C093 1822 aa23.06■■□□□ 1.28
VAT1-208ENST00000590924 ZBTB38Q8NAP3 1195 aaPredicted RBP23.06■■□□□ 1.28
VAT1-208ENST00000590924 THSD7BQ9C0I4 1608 aa23.06■■□□□ 1.28
VAT1-208ENST00000590924 SCN9AQ15858 1988 aa23.06■■□□□ 1.28
VAT1-208ENST00000590924 RASSF10A6NK89 507 aa23.05■■□□□ 1.28
VAT1-208ENST00000590924 VEGFBP49765 207 aa23.05■■□□□ 1.28
VAT1-208ENST00000590924 CCDC30Q5VVM6 783 aa23.05■■□□□ 1.28
VAT1-208ENST00000590924 YDJCA8MPS7 323 aa23.04■■□□□ 1.28
VAT1-208ENST00000590924 HSP90B1P14625 803 aaKnown RBP23.04■■□□□ 1.28
VAT1-208ENST00000590924 GMPSP49915 693 aaPredicted RBP23.04■■□□□ 1.28
VAT1-208ENST00000590924 TNIP1Q15025 636 aa23.04■■□□□ 1.28
VAT1-208ENST00000590924 CCDC191Q8NCU4 936 aa23.04■■□□□ 1.28
VAT1-208ENST00000590924 MYD88Q99836 296 aa23.04■■□□□ 1.28
VAT1-208ENST00000590924 DDX58O95786 925 aaKnown RBP23.03■■□□□ 1.28
VAT1-208ENST00000590924 NSFL1CQ9UNZ2 370 aaKnown RBP23.03■■□□□ 1.28
VAT1-208ENST00000590924 RAD17O75943 681 aa23.02■■□□□ 1.28
VAT1-208ENST00000590924 PCCAP05165 728 aaPredicted RBP23.02■■□□□ 1.28
VAT1-208ENST00000590924 HNRNPUQ00839 825 aaKnown RBP eCLIP23.02■■□□□ 1.28
VAT1-208ENST00000590924 DEFB115Q30KQ5 88 aa23.02■■□□□ 1.28
VAT1-208ENST00000590924 TNS4Q8IZW8 715 aa23.02■■□□□ 1.28
VAT1-208ENST00000590924 TSPYL6Q8N831 410 aa23.02■■□□□ 1.28
VAT1-208ENST00000590924 METTL22Q9BUU2 404 aaPredicted RBP23.02■■□□□ 1.28
VAT1-208ENST00000590924 RPS8P62241 208 aaKnown RBP23.01■■□□□ 1.27
VAT1-208ENST00000590924 WASHC4Q2M389 1173 aa23.01■■□□□ 1.27
VAT1-208ENST00000590924 BCL2L13Q9BXK5 485 aa23.01■■□□□ 1.27
VAT1-208ENST00000590924 MYH16Q9H6N6 1097 aa23.01■■□□□ 1.27
VAT1-208ENST00000590924 CWC25Q9NXE8 425 aaPredicted RBP23.01■■□□□ 1.27
VAT1-208ENST00000590924 GPSM2P81274 684 aa23■■□□□ 1.27
VAT1-208ENST00000590924 TSR2Q969E8 191 aaKnown RBP23■■□□□ 1.27
VAT1-208ENST00000590924 POLLQ9UGP5 575 aa23■■□□□ 1.27
VAT1-208ENST00000590924 ABT1Q9ULW3 272 aaKnown RBP23■■□□□ 1.27
VAT1-208ENST00000590924 PDE8AO60658 829 aa22.99■■□□□ 1.27
VAT1-208ENST00000590924 FMR1Q06787 632 aaKnown RBP eCLIP22.99■■□□□ 1.271e-8■□□□□ 10.9
VAT1-208ENST00000590924 PGAP2Q9UHJ9 254 aa22.99■■□□□ 1.27
VAT1-208ENST00000590924 E9PSI1 815 aa22.98■■□□□ 1.27
VAT1-208ENST00000590924 C6orf229H3BNL8 230 aa22.98■■□□□ 1.27
VAT1-208ENST00000590924 TRAF5O00463 557 aa22.98■■□□□ 1.27
VAT1-208ENST00000590924 FOXN1O15353 648 aa22.98■■□□□ 1.27
VAT1-208ENST00000590924 CCDC152Q4G0S7 254 aa22.98■■□□□ 1.27
VAT1-208ENST00000590924 ZC3H15Q8WU90 426 aaKnown RBP22.98■■□□□ 1.27
VAT1-208ENST00000590924 EYA3Q99504 573 aa22.98■■□□□ 1.27
VAT1-208ENST00000590924 SEC31BQ9NQW1 1179 aa22.98■■□□□ 1.27
VAT1-208ENST00000590924 CST9Q5W186 159 aa22.97■■□□□ 1.27
VAT1-208ENST00000590924 KSR2Q6VAB6 950 aa22.97■■□□□ 1.27
VAT1-208ENST00000590924 TBC1D16Q8TBP0 767 aa22.97■■□□□ 1.27
VAT1-208ENST00000590924 DBNDD1Q9H9R9 158 aa22.97■■□□□ 1.27
VAT1-208ENST00000590924 PODXL2Q9NZ53 605 aa22.97■■□□□ 1.27
VAT1-208ENST00000590924 CNOT7Q9UIV1 285 aaKnown RBP22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms