RNA–Protein interactions for RNA: ENST00000590704.5

CIRBP-229, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,456 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-229ENST00000590704 PRPF40BQ6NWY9 871 aaKnown RBP26.67■■□□□ 1.86
CIRBP-229ENST00000590704 CNKSR1Q969H4 720 aa26.67■■□□□ 1.86
CIRBP-229ENST00000590704 CLUAP1Q96AJ1 413 aa26.67■■□□□ 1.86
CIRBP-229ENST00000590704 SNED1Q8TER0 1413 aa26.66■■□□□ 1.86
CIRBP-229ENST00000590704 OLFM4Q6UX06 510 aa26.66■■□□□ 1.86
CIRBP-229ENST00000590704 CCT4P50991 539 aaKnown RBP26.65■■□□□ 1.86
CIRBP-229ENST00000590704 SUCLG2Q96I99 432 aa26.65■■□□□ 1.86
CIRBP-229ENST00000590704 SEC31BQ9NQW1 1179 aa26.65■■□□□ 1.86
CIRBP-229ENST00000590704 CACNA1SQ13698 1873 aa26.64■■□□□ 1.86
CIRBP-229ENST00000590704 PLIN1O60240 522 aa26.64■■□□□ 1.86
CIRBP-229ENST00000590704 CTSWP56202 376 aa26.64■■□□□ 1.86
CIRBP-229ENST00000590704 PELP1Q8IZL8 1130 aaKnown RBP26.64■■□□□ 1.86
CIRBP-229ENST00000590704 TMEM57Q8N5G2 664 aa26.63■■□□□ 1.85
CIRBP-229ENST00000590704 CELF1Q92879 486 aaKnown RBP26.63■■□□□ 1.85
CIRBP-229ENST00000590704 ALDH1B1P30837 517 aa26.62■■□□□ 1.85
CIRBP-229ENST00000590704 PRELPP51888 382 aa26.62■■□□□ 1.85
CIRBP-229ENST00000590704 RPGRQ92834 1020 aaKnown RBP26.62■■□□□ 1.85
CIRBP-229ENST00000590704 RBM17Q96I25 401 aaKnown RBP26.62■■□□□ 1.85
CIRBP-229ENST00000590704 MYH3P11055 1940 aa26.62■■□□□ 1.85
CIRBP-229ENST00000590704 C21orf2O43822 256 aa26.62■■□□□ 1.85
CIRBP-229ENST00000590704 CCDC85AQ96PX6 553 aaPredicted RBP26.62■■□□□ 1.85
CIRBP-229ENST00000590704 C9orf78Q9NZ63 289 aaPredicted RBP26.62■■□□□ 1.85
CIRBP-229ENST00000590704 MEIS3Q99687 375 aa26.61■■□□□ 1.85
CIRBP-229ENST00000590704 GREM2Q9H772 168 aa26.61■■□□□ 1.85
CIRBP-229ENST00000590704 GRAPQ13588 217 aa26.6■■□□□ 1.85
CIRBP-229ENST00000590704 GRAPLQ8TC17 118 aaPredicted RBP26.6■■□□□ 1.85
CIRBP-229ENST00000590704 RABL6Q3YEC7 729 aaPredicted RBP26.59■■□□□ 1.85
CIRBP-229ENST00000590704 DZIP1LQ8IYY4 767 aaKnown RBP26.59■■□□□ 1.85
CIRBP-229ENST00000590704 ANKRD44Q8N8A2 993 aa26.59■■□□□ 1.85
CIRBP-229ENST00000590704 ZNF219Q9P2Y4 722 aaPredicted RBP26.59■■□□□ 1.85
CIRBP-229ENST00000590704 RTL9Q8NET4 1388 aa26.59■■□□□ 1.85
CIRBP-229ENST00000590704 NFKBIEO00221 500 aa26.58■■□□□ 1.85
CIRBP-229ENST00000590704 GRIN3BO60391 1043 aa26.58■■□□□ 1.85
CIRBP-229ENST00000590704 PANK1Q8TE04 598 aa26.58■■□□□ 1.85
CIRBP-229ENST00000590704 FER1L6Q2WGJ9 1857 aa26.57■■□□□ 1.84
CIRBP-229ENST00000590704 HSP90B1P14625 803 aaKnown RBP26.57■■□□□ 1.84
CIRBP-229ENST00000590704 CCDC152Q4G0S7 254 aa26.57■■□□□ 1.84
CIRBP-229ENST00000590704 C20orf194Q5TEA3 1177 aa26.57■■□□□ 1.84
CIRBP-229ENST00000590704 DDX46Q7L014 1031 aaKnown RBP26.57■■□□□ 1.84
CIRBP-229ENST00000590704 BBOX1O75936 387 aa26.56■■□□□ 1.84
CIRBP-229ENST00000590704 LMBR1LQ6UX01 489 aa26.56■■□□□ 1.84
CIRBP-229ENST00000590704 BICC1Q9H694 974 aaKnown RBP26.56■■□□□ 1.84
CIRBP-229ENST00000590704 YY1P25490 414 aa26.55■■□□□ 1.84
CIRBP-229ENST00000590704 FAM161AQ3B820 660 aa26.55■■□□□ 1.84
CIRBP-229ENST00000590704 ZBTB7BO15156 539 aaPredicted RBP26.55■■□□□ 1.84
CIRBP-229ENST00000590704 RPS8P62241 208 aaKnown RBP26.55■■□□□ 1.84
CIRBP-229ENST00000590704 ATP6V0A2Q9Y487 856 aa26.55■■□□□ 1.84
CIRBP-229ENST00000590704 PPEF1O14829 653 aaPredicted RBP26.54■■□□□ 1.84
CIRBP-229ENST00000590704 ARHGAP27Q6ZUM4 889 aa26.54■■□□□ 1.84
CIRBP-229ENST00000590704 SBF1O95248 1867 aa26.53■■□□□ 1.84
CIRBP-229ENST00000590704 SP8Q8IXZ3 490 aa26.53■■□□□ 1.84
CIRBP-229ENST00000590704 ITGA6P23229 1130 aa26.52■■□□□ 1.84
CIRBP-229ENST00000590704 RASSF7Q02833 373 aa26.52■■□□□ 1.84
CIRBP-229ENST00000590704 LRRC37AA6NMS7 1700 aa26.51■■□□□ 1.83
CIRBP-229ENST00000590704 RFX5P48382 616 aaPredicted RBP26.49■■□□□ 1.83
CIRBP-229ENST00000590704 LRRFIP2Q9Y608 721 aaKnown RBP26.49■■□□□ 1.83
CIRBP-229ENST00000590704 UBTFL1P0CB47 393 aaPredicted RBP26.49■■□□□ 1.83
CIRBP-229ENST00000590704 CCDC93Q567U6 631 aa26.49■■□□□ 1.83
CIRBP-229ENST00000590704 LTBP3Q9NS15 1303 aa26.48■■□□□ 1.83
CIRBP-229ENST00000590704 PDE3AQ14432 1141 aa26.48■■□□□ 1.83
CIRBP-229ENST00000590704 FTSJ3Q8IY81 847 aaKnown RBP26.48■■□□□ 1.83
CIRBP-229ENST00000590704 ZNF594Q96JF6 807 aaPredicted RBP26.48■■□□□ 1.83
CIRBP-229ENST00000590704 LTBP1Q14766 1721 aa26.47■■□□□ 1.83
CIRBP-229ENST00000590704 WTIPA6NIX2 430 aaPredicted RBP26.47■■□□□ 1.83
CIRBP-229ENST00000590704 CC2D2BQ6DHV5 1058 aa26.47■■□□□ 1.83
CIRBP-229ENST00000590704 BSDC1Q9NW68 430 aaPredicted RBP26.47■■□□□ 1.83
CIRBP-229ENST00000590704 COG6Q9Y2V7 657 aa26.47■■□□□ 1.83
CIRBP-229ENST00000590704 CHD4Q14839 1912 aa26.47■■□□□ 1.83
CIRBP-229ENST00000590704 DUOX1Q9NRD9 1551 aa26.46■■□□□ 1.83
CIRBP-229ENST00000590704 RRP1P56182 461 aaKnown RBP26.46■■□□□ 1.83
CIRBP-229ENST00000590704 ANKRD18AQ8IVF6 992 aa26.46■■□□□ 1.83
CIRBP-229ENST00000590704 RTFDC1Q9BY42 306 aaPredicted RBP26.46■■□□□ 1.83
CIRBP-229ENST00000590704 GNAI3P08754 354 aa26.45■■□□□ 1.82
CIRBP-229ENST00000590704 GPSM2P81274 684 aa26.45■■□□□ 1.82
CIRBP-229ENST00000590704 MVPQ14764 893 aaKnown RBP26.45■■□□□ 1.82
CIRBP-229ENST00000590704 CCDC88AQ3V6T2 1871 aa26.45■■□□□ 1.82
CIRBP-229ENST00000590704 SOGA3Q5TF21 947 aa26.45■■□□□ 1.82
CIRBP-229ENST00000590704 TMC4Q7Z404 712 aa26.45■■□□□ 1.82
CIRBP-229ENST00000590704 ITPRIPQ8IWB1 547 aa26.45■■□□□ 1.82
CIRBP-229ENST00000590704 RTKN2Q8IZC4 609 aa26.45■■□□□ 1.82
CIRBP-229ENST00000590704 CDC5LQ99459 802 aaKnown RBP26.45■■□□□ 1.82
CIRBP-229ENST00000590704 PSMD1Q99460 953 aa26.45■■□□□ 1.82
CIRBP-229ENST00000590704 MINPP1Q9UNW1 487 aa26.45■■□□□ 1.82
CIRBP-229ENST00000590704 FKBP4Q02790 459 aaKnown RBP eCLIP26.44■■□□□ 1.82
CIRBP-229ENST00000590704 ANKRD18BA2A2Z9 1011 aa26.43■■□□□ 1.82
CIRBP-229ENST00000590704 IFIT5Q13325 482 aaKnown RBP26.43■■□□□ 1.82
CIRBP-229ENST00000590704 MTX1Q13505 466 aa26.43■■□□□ 1.82
CIRBP-229ENST00000590704 PUS3Q9BZE2 481 aaKnown RBP26.43■■□□□ 1.82
CIRBP-229ENST00000590704 COL4A5P29400 1685 aa26.43■■□□□ 1.82
CIRBP-229ENST00000590704 SPEF2Q9C093 1822 aa26.43■■□□□ 1.82
CIRBP-229ENST00000590704 KLHDC4Q8TBB5 520 aa26.42■■□□□ 1.82
CIRBP-229ENST00000590704 PODXL2Q9NZ53 605 aa26.42■■□□□ 1.82
CIRBP-229ENST00000590704 POLLQ9UGP5 575 aa26.42■■□□□ 1.82
CIRBP-229ENST00000590704 MS4A1P11836 297 aa26.42■■□□□ 1.82
CIRBP-229ENST00000590704 PTPN12Q05209 780 aaKnown RBP26.42■■□□□ 1.82
CIRBP-229ENST00000590704 TAOK3Q9H2K8 898 aa26.42■■□□□ 1.82
CIRBP-229ENST00000590704 CHMP3Q9Y3E7 222 aa26.42■■□□□ 1.82
CIRBP-229ENST00000590704 CCDC57Q2TAC2 916 aa26.41■■□□□ 1.82
CIRBP-229ENST00000590704 MPNDQ8N594 471 aa26.41■■□□□ 1.82
CIRBP-229ENST00000590704 ZNF277Q9NRM2 450 aaPredicted RBP26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms