RNA–Protein interactions for RNA: ENST00000590208.5

MBD1-222, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-222ENST00000590208 NEMFO60524 1076 aa18.53■□□□□ 0.56
MBD1-222ENST00000590208 RESTQ13127 1097 aa18.53■□□□□ 0.56
MBD1-222ENST00000590208 HSP90AB4PQ58FF6 505 aa18.53■□□□□ 0.56
MBD1-222ENST00000590208 DHX40Q8IX18 779 aaKnown RBP18.53■□□□□ 0.56
MBD1-222ENST00000590208 AMPHP49418 695 aa18.52■□□□□ 0.56
MBD1-222ENST00000590208 GOLPH3LQ9H4A5 285 aa18.52■□□□□ 0.56
MBD1-222ENST00000590208 KDRP35968 1356 aa18.52■□□□□ 0.55
MBD1-222ENST00000590208 CRYBG1Q9Y4K1 1723 aa18.52■□□□□ 0.55
MBD1-222ENST00000590208 PXDNLA1KZ92 1463 aa18.52■□□□□ 0.55
MBD1-222ENST00000590208 DNAAF4Q8WXU2 420 aa18.51■□□□□ 0.55
MBD1-222ENST00000590208 CCDC8Q9H0W5 538 aaPredicted RBP18.51■□□□□ 0.55
MBD1-222ENST00000590208 CHPF2Q9P2E5 772 aa18.51■□□□□ 0.55
MBD1-222ENST00000590208 CAPN2P17655 700 aa18.51■□□□□ 0.55
MBD1-222ENST00000590208 STX1AQ16623 288 aa18.51■□□□□ 0.55
MBD1-222ENST00000590208 SLFNL1Q499Z3 407 aa18.51■□□□□ 0.55
MBD1-222ENST00000590208 CCAR1Q8IX12 1150 aaKnown RBP18.51■□□□□ 0.55
MBD1-222ENST00000590208 NOL10Q9BSC4 688 aaKnown RBP18.51■□□□□ 0.55
MBD1-222ENST00000590208 NAP1L2Q9ULW6 460 aaPredicted RBP18.51■□□□□ 0.55
MBD1-222ENST00000590208 H3BQV1 296 aa18.5■□□□□ 0.55
MBD1-222ENST00000590208 PDIA4P13667 645 aaKnown RBP18.5■□□□□ 0.55
MBD1-222ENST00000590208 IFFO2Q5TF58 517 aa18.5■□□□□ 0.55
MBD1-222ENST00000590208 ZNF589Q86UQ0 364 aaPredicted RBP18.5■□□□□ 0.55
MBD1-222ENST00000590208 IGSF1Q8N6C5 1336 aa18.5■□□□□ 0.55
MBD1-222ENST00000590208 PPFIA3O75145 1194 aa18.5■□□□□ 0.55
MBD1-222ENST00000590208 CAVIN2O95810 425 aa18.5■□□□□ 0.55
MBD1-222ENST00000590208 ANKRD1Q15327 319 aa18.5■□□□□ 0.55
MBD1-222ENST00000590208 E4F1Q66K89 784 aaPredicted RBP18.5■□□□□ 0.55
MBD1-222ENST00000590208 SYT10Q6XYQ8 523 aa18.5■□□□□ 0.55
MBD1-222ENST00000590208 AOPEPQ8N6M6 819 aa18.5■□□□□ 0.55
MBD1-222ENST00000590208 FHOD1Q9Y613 1164 aa18.5■□□□□ 0.55
MBD1-222ENST00000590208 H2AFXP16104 143 aaPredicted RBP18.5■□□□□ 0.55
MBD1-222ENST00000590208 CLCN6P51797 869 aa18.5■□□□□ 0.55
MBD1-222ENST00000590208 BOLA2Q9H3K6 86 aa18.5■□□□□ 0.55
MBD1-222ENST00000590208 NPHP4O75161 1426 aaPredicted RBP18.49■□□□□ 0.55
MBD1-222ENST00000590208 SNW1Q13573 536 aaKnown RBP18.49■□□□□ 0.55
MBD1-222ENST00000590208 TLR7Q9NYK1 1049 aaKnown RBP18.49■□□□□ 0.55
MBD1-222ENST00000590208 SPATA31D1Q6ZQQ2 1576 aa18.49■□□□□ 0.55
MBD1-222ENST00000590208 PDE4CQ08493 712 aa18.49■□□□□ 0.55
MBD1-222ENST00000590208 NBPF11Q86T75 865 aa18.49■□□□□ 0.55
MBD1-222ENST00000590208 GPATCH3Q96I76 525 aa18.49■□□□□ 0.55
MBD1-222ENST00000590208 USP31Q70CQ4 1352 aa18.48■□□□□ 0.55
MBD1-222ENST00000590208 ADGRL3Q9HAR2 1447 aa18.48■□□□□ 0.55
MBD1-222ENST00000590208 LTV1Q96GA3 475 aaPredicted RBP18.48■□□□□ 0.55
MBD1-222ENST00000590208 LRRC2Q9BYS8 371 aa18.48■□□□□ 0.55
MBD1-222ENST00000590208 CALCOCO1Q9P1Z2 691 aa18.48■□□□□ 0.55
MBD1-222ENST00000590208 HNRNPH2P55795 449 aaKnown RBP18.48■□□□□ 0.55
MBD1-222ENST00000590208 BMS1Q14692 1282 aaKnown RBP18.48■□□□□ 0.55
MBD1-222ENST00000590208 GORABQ5T7V8 394 aa18.48■□□□□ 0.55
MBD1-222ENST00000590208 EAF2Q96CJ1 260 aaPredicted RBP18.48■□□□□ 0.55
MBD1-222ENST00000590208 FSD1Q9BTV5 496 aa18.48■□□□□ 0.55
MBD1-222ENST00000590208 CACNA1FO60840 1977 aa18.48■□□□□ 0.55
MBD1-222ENST00000590208 FLT4P35916 1363 aa18.48■□□□□ 0.55
MBD1-222ENST00000590208 AGLP35573 1532 aa18.47■□□□□ 0.55
MBD1-222ENST00000590208 HTATSF1O43719 755 aaKnown RBP18.47■□□□□ 0.55
MBD1-222ENST00000590208 CYP2C19P33261 490 aa18.47■□□□□ 0.55
MBD1-222ENST00000590208 ADD1P35611 737 aaKnown RBP18.47■□□□□ 0.55
MBD1-222ENST00000590208 RNF20Q5VTR2 975 aa18.47■□□□□ 0.55
MBD1-222ENST00000590208 EDC3Q96F86 508 aaKnown RBP18.47■□□□□ 0.55
MBD1-222ENST00000590208 USP6P35125 1406 aa18.47■□□□□ 0.55
MBD1-222ENST00000590208 PPP1R13BQ96KQ4 1090 aa18.47■□□□□ 0.55
MBD1-222ENST00000590208 L2HGDHQ9H9P8 463 aa18.47■□□□□ 0.55
MBD1-222ENST00000590208 GIGYF1O75420 1035 aaPredicted RBP18.46■□□□□ 0.55
MBD1-222ENST00000590208 PLA2G4AP47712 749 aa18.46■□□□□ 0.55
MBD1-222ENST00000590208 ARHGAP29Q52LW3 1261 aa18.46■□□□□ 0.55
MBD1-222ENST00000590208 CFAP45Q9UL16 551 aa18.46■□□□□ 0.55
MBD1-222ENST00000590208 KCNQ3O43525 872 aa18.46■□□□□ 0.55
MBD1-222ENST00000590208 PNMA6AP0CW24 399 aaPredicted RBP18.46■□□□□ 0.55
MBD1-222ENST00000590208 HSP90B1P14625 803 aaKnown RBP18.46■□□□□ 0.55
MBD1-222ENST00000590208 CHGBP05060 677 aa18.46■□□□□ 0.55
MBD1-222ENST00000590208 ROBO2Q9HCK4 1378 aa18.46■□□□□ 0.54
MBD1-222ENST00000590208 CHD2O14647 1828 aaKnown RBP18.45■□□□□ 0.54
MBD1-222ENST00000590208 SASH1O94885 1247 aa18.45■□□□□ 0.54
MBD1-222ENST00000590208 ARMCX5Q6P1M9 558 aa18.45■□□□□ 0.54
MBD1-222ENST00000590208 PLCD3Q8N3E9 789 aa18.45■□□□□ 0.54
MBD1-222ENST00000590208 USHBP1Q8N6Y0 703 aa18.45■□□□□ 0.54
MBD1-222ENST00000590208 C9orf78Q9NZ63 289 aaPredicted RBP18.45■□□□□ 0.54
MBD1-222ENST00000590208 N4BP2Q86UW6 1770 aaPredicted RBP18.45■□□□□ 0.54
MBD1-222ENST00000590208 NRXN3Q9Y4C0 1643 aa18.45■□□□□ 0.54
MBD1-222ENST00000590208 SBNO1A3KN83 1393 aa18.45■□□□□ 0.54
MBD1-222ENST00000590208 TULP2O00295 520 aa18.45■□□□□ 0.54
MBD1-222ENST00000590208 POLR3GO15318 223 aaPredicted RBP18.45■□□□□ 0.54
MBD1-222ENST00000590208 CCDC93Q567U6 631 aa18.45■□□□□ 0.54
MBD1-222ENST00000590208 USP28Q96RU2 1077 aa18.45■□□□□ 0.54
MBD1-222ENST00000590208 ANO10Q9NW15 660 aa18.45■□□□□ 0.54
MBD1-222ENST00000590208 KINO60870 393 aaKnown RBP18.44■□□□□ 0.54
MBD1-222ENST00000590208 Q6ZUG5 572 aa18.44■□□□□ 0.54
MBD1-222ENST00000590208 CWF19L2Q2TBE0 894 aaKnown RBP18.44■□□□□ 0.54
MBD1-222ENST00000590208 CCDC73Q6ZRK6 1079 aa18.44■□□□□ 0.54
MBD1-222ENST00000590208 SIL1Q9H173 461 aa18.44■□□□□ 0.54
MBD1-222ENST00000590208 PLEKHG3A1L390 1219 aa18.43■□□□□ 0.54
MBD1-222ENST00000590208 CTAGE5O15320 804 aa18.43■□□□□ 0.54
MBD1-222ENST00000590208 NUTM2GQ5VZR2 741 aa18.43■□□□□ 0.54
MBD1-222ENST00000590208 TMC6Q7Z403 805 aa18.43■□□□□ 0.54
MBD1-222ENST00000590208 CEP57L1Q8IYX8 460 aa18.43■□□□□ 0.54
MBD1-222ENST00000590208 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.43■□□□□ 0.542e-7■■■■□ 20.3
MBD1-222ENST00000590208 SMC2O95347 1197 aa18.43■□□□□ 0.54
MBD1-222ENST00000590208 SCRN1Q12765 414 aa18.43■□□□□ 0.54
MBD1-222ENST00000590208 ENGASEQ8NFI3 743 aa18.43■□□□□ 0.54
MBD1-222ENST00000590208 NEK11Q8NG66 645 aa18.43■□□□□ 0.54
MBD1-222ENST00000590208 FMNL2Q96PY5 1086 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms