RNA–Protein interactions for RNA: ENST00000589937.5

RFX1-207, Transcript of regulatory factor X1, humanhuman

TSL 4

Gene RFX1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-207ENST00000589937 MYD88Q99836 296 aa16.4■□□□□ 0.22
RFX1-207ENST00000589937 CACNA1FO60840 1977 aa16.4■□□□□ 0.22
RFX1-207ENST00000589937 SCNN1DP51172 638 aa16.39■□□□□ 0.21
RFX1-207ENST00000589937 WWC1Q8IX03 1113 aa16.39■□□□□ 0.21
RFX1-207ENST00000589937 NIM1KQ8IY84 436 aa16.39■□□□□ 0.21
RFX1-207ENST00000589937 JMYQ8N9B5 988 aa16.39■□□□□ 0.21
RFX1-207ENST00000589937 SALL2Q9Y467 1007 aaPredicted RBP16.39■□□□□ 0.21
RFX1-207ENST00000589937 PASKQ96RG2 1323 aa16.39■□□□□ 0.21
RFX1-207ENST00000589937 EPS15P42566 896 aa16.38■□□□□ 0.21
RFX1-207ENST00000589937 EIF6P56537 245 aaKnown RBP16.38■□□□□ 0.21
RFX1-207ENST00000589937 MAP1SQ66K74 1059 aaPredicted RBP16.38■□□□□ 0.21
RFX1-207ENST00000589937 DPP8Q6V1X1 898 aaPredicted RBP16.38■□□□□ 0.21
RFX1-207ENST00000589937 GPR101Q96P66 508 aaPredicted RBP16.38■□□□□ 0.21
RFX1-207ENST00000589937 PSME4Q14997 1843 aa16.38■□□□□ 0.21
RFX1-207ENST00000589937 IRS4O14654 1257 aaPredicted RBP16.37■□□□□ 0.21
RFX1-207ENST00000589937 G2E3Q7L622 706 aa16.37■□□□□ 0.21
RFX1-207ENST00000589937 SP8Q8IXZ3 490 aa16.37■□□□□ 0.21
RFX1-207ENST00000589937 RTFDC1Q9BY42 306 aaPredicted RBP16.37■□□□□ 0.21
RFX1-207ENST00000589937 MKRN1Q9UHC7 482 aaKnown RBP16.37■□□□□ 0.21
RFX1-207ENST00000589937 ZNF646O15015 1829 aaPredicted RBP16.36■□□□□ 0.21
RFX1-207ENST00000589937 BBOX1O75936 387 aa16.36■□□□□ 0.21
RFX1-207ENST00000589937 FMR1Q06787 632 aaKnown RBP eCLIP16.36■□□□□ 0.21
RFX1-207ENST00000589937 MPNDQ8N594 471 aa16.36■□□□□ 0.21
RFX1-207ENST00000589937 CCDC85AQ96PX6 553 aaPredicted RBP16.36■□□□□ 0.21
RFX1-207ENST00000589937 SEC31BQ9NQW1 1179 aa16.36■□□□□ 0.21
RFX1-207ENST00000589937 CLEC11AQ9Y240 323 aa16.36■□□□□ 0.21
RFX1-207ENST00000589937 FANCIQ9NVI1 1328 aa16.36■□□□□ 0.21
RFX1-207ENST00000589937 A0A1B0GUL6 1792 aa16.36■□□□□ 0.21
RFX1-207ENST00000589937 SHTN1A0MZ66 631 aa16.35■□□□□ 0.21
RFX1-207ENST00000589937 YDJCA8MPS7 323 aa16.35■□□□□ 0.21
RFX1-207ENST00000589937 ANP32CO43423 234 aa16.35■□□□□ 0.21
RFX1-207ENST00000589937 ITGBL1O95965 494 aaPredicted RBP16.35■□□□□ 0.21
RFX1-207ENST00000589937 TRIM28Q13263 835 aaKnown RBP16.35■□□□□ 0.21
RFX1-207ENST00000589937 SF3B3Q15393 1217 aaKnown RBP16.35■□□□□ 0.21
RFX1-207ENST00000589937 CCDC27Q2M243 656 aa16.35■□□□□ 0.21
RFX1-207ENST00000589937 GRIPAP1Q4V328 841 aa16.35■□□□□ 0.21
RFX1-207ENST00000589937 CCDC30Q5VVM6 783 aa16.35■□□□□ 0.21
RFX1-207ENST00000589937 MAP3K2Q9Y2U5 619 aa16.35■□□□□ 0.21
RFX1-207ENST00000589937 RAD17O75943 681 aa16.34■□□□□ 0.21
RFX1-207ENST00000589937 IGKV5-2P06315 115 aa16.34■□□□□ 0.21
RFX1-207ENST00000589937 GPSM2P81274 684 aa16.34■□□□□ 0.21
RFX1-207ENST00000589937 CXCL9Q07325 125 aa16.34■□□□□ 0.21
RFX1-207ENST00000589937 KIAA2012Q0VF49 1180 aa16.34■□□□□ 0.21
RFX1-207ENST00000589937 TWISTNBQ3B726 338 aaPredicted RBP16.34■□□□□ 0.21
RFX1-207ENST00000589937 ZBTB38Q8NAP3 1195 aaPredicted RBP16.34■□□□□ 0.21
RFX1-207ENST00000589937 METTL22Q9BUU2 404 aaPredicted RBP16.34■□□□□ 0.21
RFX1-207ENST00000589937 CREBZFQ9NS37 354 aa16.34■□□□□ 0.21
RFX1-207ENST00000589937 POLR2AP24928 1970 aaKnown RBP16.33■□□□□ 0.21
RFX1-207ENST00000589937 LMOD1P29536 600 aaPredicted RBP16.33■□□□□ 0.2
RFX1-207ENST00000589937 GMPSP49915 693 aaPredicted RBP16.33■□□□□ 0.2
RFX1-207ENST00000589937 TMX4Q9H1E5 349 aaPredicted RBP16.33■□□□□ 0.2
RFX1-207ENST00000589937 SPINK5Q9NQ38 1064 aaPredicted RBP16.33■□□□□ 0.2
RFX1-207ENST00000589937 CWC25Q9NXE8 425 aaPredicted RBP16.33■□□□□ 0.2
RFX1-207ENST00000589937 ZNRF3Q9ULT6 936 aa16.33■□□□□ 0.2
RFX1-207ENST00000589937 PI4KAP2A4QPH2 592 aa16.32■□□□□ 0.2
RFX1-207ENST00000589937 PCCAP05165 728 aaPredicted RBP16.32■□□□□ 0.2
RFX1-207ENST00000589937 CNTNAP1P78357 1384 aa16.32■□□□□ 0.2
RFX1-207ENST00000589937 CWF19L2Q2TBE0 894 aaKnown RBP16.32■□□□□ 0.2
RFX1-207ENST00000589937 PI4KAP1Q8N8J0 262 aa16.32■□□□□ 0.2
RFX1-207ENST00000589937 SUPT20HQ8NEM7 779 aa16.32■□□□□ 0.2
RFX1-207ENST00000589937 DBNDD1Q9H9R9 158 aa16.32■□□□□ 0.2
RFX1-207ENST00000589937 GPRC5DQ9NZD1 345 aa16.32■□□□□ 0.2
RFX1-207ENST00000589937 POLLQ9UGP5 575 aa16.32■□□□□ 0.2
RFX1-207ENST00000589937 THSD7BQ9C0I4 1608 aa16.31■□□□□ 0.2
RFX1-207ENST00000589937 IL16Q14005 1332 aa16.31■□□□□ 0.2
RFX1-207ENST00000589937 TRAF5O00463 557 aa16.31■□□□□ 0.2
RFX1-207ENST00000589937 RIMBP2O15034 1052 aa16.31■□□□□ 0.2
RFX1-207ENST00000589937 HSPA1AP0DMV8 641 aaKnown RBP16.31■□□□□ 0.2
RFX1-207ENST00000589937 HSPA1BP0DMV9 641 aaKnown RBP16.31■□□□□ 0.2
RFX1-207ENST00000589937 PNMA8AQ86V59 439 aaPredicted RBP16.31■□□□□ 0.2
RFX1-207ENST00000589937 CNTROBQ8N137 903 aa16.31■□□□□ 0.2
RFX1-207ENST00000589937 CCDC191Q8NCU4 936 aa16.31■□□□□ 0.2
RFX1-207ENST00000589937 NSFL1CQ9UNZ2 370 aaKnown RBP16.31■□□□□ 0.2
RFX1-207ENST00000589937 RTL9Q8NET4 1388 aa16.3■□□□□ 0.2
RFX1-207ENST00000589937 DDX58O95786 925 aaKnown RBP16.3■□□□□ 0.2
RFX1-207ENST00000589937 IFFO2Q5TF58 517 aa16.3■□□□□ 0.2
RFX1-207ENST00000589937 KSR2Q6VAB6 950 aa16.3■□□□□ 0.2
RFX1-207ENST00000589937 FAM9BQ8IZU0 186 aa16.3■□□□□ 0.2
RFX1-207ENST00000589937 TRPM4Q8TD43 1214 aa16.3■□□□□ 0.2
RFX1-207ENST00000589937 STK31Q9BXU1 1019 aa16.3■□□□□ 0.2
RFX1-207ENST00000589937 KCNQ5Q9NR82 932 aa16.3■□□□□ 0.2
RFX1-207ENST00000589937 TMEM88BA6NKF7 163 aa16.29■□□□□ 0.2
RFX1-207ENST00000589937 C6orf229H3BNL8 230 aa16.29■□□□□ 0.2
RFX1-207ENST00000589937 DOK7Q18PE1 504 aa16.29■□□□□ 0.2
RFX1-207ENST00000589937 COL13A1Q5TAT6 717 aaPredicted RBP16.29■□□□□ 0.2
RFX1-207ENST00000589937 CIAPIN1Q6FI81 312 aa16.29■□□□□ 0.2
RFX1-207ENST00000589937 TMC4Q7Z404 712 aa16.29■□□□□ 0.2
RFX1-207ENST00000589937 VPS33BQ9H267 617 aa16.29■□□□□ 0.2
RFX1-207ENST00000589937 ZBTB12Q9Y330 459 aaPredicted RBP16.29■□□□□ 0.2
RFX1-207ENST00000589937 WTIPA6NIX2 430 aaPredicted RBP16.28■□□□□ 0.2
RFX1-207ENST00000589937 NEURL1BA8MQ27 555 aa16.28■□□□□ 0.2
RFX1-207ENST00000589937 PDE8AO60658 829 aa16.28■□□□□ 0.2
RFX1-207ENST00000589937 SLC4A2P04920 1241 aa16.28■□□□□ 0.2
RFX1-207ENST00000589937 RPS8P62241 208 aaKnown RBP16.28■□□□□ 0.2
RFX1-207ENST00000589937 EXOSC9Q06265 439 aaKnown RBP16.28■□□□□ 0.2
RFX1-207ENST00000589937 TBC1D16Q8TBP0 767 aa16.28■□□□□ 0.2
RFX1-207ENST00000589937 CDHR2Q9BYE9 1310 aa16.27■□□□□ 0.2
RFX1-207ENST00000589937 PSMD14O00487 310 aa16.27■□□□□ 0.2
RFX1-207ENST00000589937 ECE2O60344 883 aa16.27■□□□□ 0.2
RFX1-207ENST00000589937 UFL1O94874 794 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms