RNA–Protein interactions for RNA: ENST00000589925.1

SAFB2-204, Transcript of scaffold attachment factor B2, humanhuman

TSL 3

Gene SAFB2, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-204ENST00000589925 GCKRQ14397 625 aa21.41■■□□□ 1.02
SAFB2-204ENST00000589925 NMRK2Q9NPI5 230 aa21.41■■□□□ 1.02
SAFB2-204ENST00000589925 COL4A1P02462 1669 aa21.4■■□□□ 1.02
SAFB2-204ENST00000589925 GLTPD2A6NH11 291 aa21.4■■□□□ 1.02
SAFB2-204ENST00000589925 PDE8AO60658 829 aa21.4■■□□□ 1.02
SAFB2-204ENST00000589925 SP8Q8IXZ3 490 aa21.4■■□□□ 1.02
SAFB2-204ENST00000589925 H7C1W4 665 aa21.39■■□□□ 1.01
SAFB2-204ENST00000589925 IARSP41252 1262 aaKnown RBP21.39■■□□□ 1.01
SAFB2-204ENST00000589925 BEND3Q5T5X7 828 aa21.39■■□□□ 1.01
SAFB2-204ENST00000589925 TMC4Q7Z404 712 aa21.39■■□□□ 1.01
SAFB2-204ENST00000589925 MRPL50Q8N5N7 158 aaKnown RBP21.39■■□□□ 1.01
SAFB2-204ENST00000589925 CELF1Q92879 486 aaKnown RBP21.39■■□□□ 1.01
SAFB2-204ENST00000589925 DICER1Q9UPY3 1922 aaKnown RBP21.38■■□□□ 1.01
SAFB2-204ENST00000589925 C1QTNF8P60827 252 aa21.38■■□□□ 1.01
SAFB2-204ENST00000589925 UBE3BQ7Z3V4 1068 aa21.38■■□□□ 1.01
SAFB2-204ENST00000589925 SSH1Q8WYL5 1049 aa21.38■■□□□ 1.01
SAFB2-204ENST00000589925 TMX4Q9H1E5 349 aaPredicted RBP21.38■■□□□ 1.01
SAFB2-204ENST00000589925 CCDC88AQ3V6T2 1871 aa21.37■■□□□ 1.01
SAFB2-204ENST00000589925 CASP7P55210 303 aa21.37■■□□□ 1.01
SAFB2-204ENST00000589925 CCDC152Q4G0S7 254 aa21.37■■□□□ 1.01
SAFB2-204ENST00000589925 RTFDC1Q9BY42 306 aaPredicted RBP21.37■■□□□ 1.01
SAFB2-204ENST00000589925 LRRC37AA6NMS7 1700 aa21.36■■□□□ 1.01
SAFB2-204ENST00000589925 CT47B1P0C2W7 299 aaPredicted RBP21.36■■□□□ 1.01
SAFB2-204ENST00000589925 CTSWP56202 376 aa21.36■■□□□ 1.01
SAFB2-204ENST00000589925 SEC31BQ9NQW1 1179 aa21.36■■□□□ 1.01
SAFB2-204ENST00000589925 COL4A5P29400 1685 aa21.36■■□□□ 1.01
SAFB2-204ENST00000589925 ALDH1L2Q3SY69 923 aa21.35■■□□□ 1.01
SAFB2-204ENST00000589925 DPY19L2Q6NUT2 758 aa21.35■■□□□ 1.01
SAFB2-204ENST00000589925 TAF1P21675 1872 aa21.35■■□□□ 1.01
SAFB2-204ENST00000589925 PTPRCP08575 1304 aa21.34■■□□□ 1.01
SAFB2-204ENST00000589925 RPS8P62241 208 aaKnown RBP21.34■■□□□ 1.01
SAFB2-204ENST00000589925 HNRNPUQ00839 825 aaKnown RBP eCLIP21.34■■□□□ 1.01
SAFB2-204ENST00000589925 DPP8Q6V1X1 898 aaPredicted RBP21.34■■□□□ 1.01
SAFB2-204ENST00000589925 TTLL11Q8NHH1 800 aa21.34■■□□□ 1.01
SAFB2-204ENST00000589925 CCDC85AQ96PX6 553 aaPredicted RBP21.34■■□□□ 1.01
SAFB2-204ENST00000589925 PLA2G12BQ9BX93 195 aa21.34■■□□□ 1.01
SAFB2-204ENST00000589925 BCL2L13Q9BXK5 485 aa21.34■■□□□ 1.01
SAFB2-204ENST00000589925 RRAGCQ9HB90 399 aa21.34■■□□□ 1.01
SAFB2-204ENST00000589925 DUOX1Q9NRD9 1551 aa21.33■■□□□ 1.01
SAFB2-204ENST00000589925 FZD9O00144 591 aa21.33■■□□□ 1.01
SAFB2-204ENST00000589925 MPNDQ8N594 471 aa21.33■■□□□ 1.01
SAFB2-204ENST00000589925 RTL9Q8NET4 1388 aa21.33■■□□□ 1
SAFB2-204ENST00000589925 ZNF541Q9H0D2 1346 aa21.32■■□□□ 1
SAFB2-204ENST00000589925 SUPT20HQ8NEM7 779 aa21.32■■□□□ 1
SAFB2-204ENST00000589925 JDP2Q8WYK2 163 aa21.32■■□□□ 1
SAFB2-204ENST00000589925 VPS33BQ9H267 617 aa21.32■■□□□ 1
SAFB2-204ENST00000589925 WDR90Q96KV7 1748 aa21.32■■□□□ 1
SAFB2-204ENST00000589925 POTECB2RU33 542 aa21.31■■□□□ 1
SAFB2-204ENST00000589925 DDNO94850 711 aaPredicted RBP21.31■■□□□ 1
SAFB2-204ENST00000589925 SLC4A10Q6U841 1118 aa21.31■■□□□ 1
SAFB2-204ENST00000589925 LARGE2Q8N3Y3 721 aa21.31■■□□□ 1
SAFB2-204ENST00000589925 SRCIN1Q9C0H9 1055 aa21.31■■□□□ 1
SAFB2-204ENST00000589925 GREM2Q9H772 168 aa21.31■■□□□ 1
SAFB2-204ENST00000589925 SMC4Q9NTJ3 1288 aa21.31■■□□□ 1
SAFB2-204ENST00000589925 CEP350Q5VT06 3117 aa21.31■■□□□ 1
SAFB2-204ENST00000589925 PPIP5K2O43314 1243 aa21.3■■□□□ 1
SAFB2-204ENST00000589925 ALDH1L1O75891 902 aa21.3■■□□□ 1
SAFB2-204ENST00000589925 TOMM70O94826 608 aa21.3■■□□□ 1
SAFB2-204ENST00000589925 AOC3Q16853 763 aa21.3■■□□□ 1
SAFB2-204ENST00000589925 LTBP1Q14766 1721 aa21.29■■□□□ 1
SAFB2-204ENST00000589925 GRM8O00222 908 aa21.29■■□□□ 1
SAFB2-204ENST00000589925 CSF1RP07333 972 aa21.29■■□□□ 1
SAFB2-204ENST00000589925 VEGFAP15692 232 aaPredicted RBP21.29■■□□□ 1
SAFB2-204ENST00000589925 GPSM2P81274 684 aa21.29■■□□□ 1
SAFB2-204ENST00000589925 L3MBTL3Q96JM7 780 aaPredicted RBP21.29■■□□□ 1
SAFB2-204ENST00000589925 NSFL1CQ9UNZ2 370 aaKnown RBP21.29■■□□□ 1
SAFB2-204ENST00000589925 BRPF1P55201 1214 aaPredicted RBP21.28■■□□□ 1
SAFB2-204ENST00000589925 KIAA2012Q0VF49 1180 aa21.28■■□□□ 1
SAFB2-204ENST00000589925 ANKRD18AQ8IVF6 992 aa21.28■■□□□ 1
SAFB2-204ENST00000589925 CDC5LQ99459 802 aaKnown RBP21.28■■□□□ 1
SAFB2-204ENST00000589925 RARSP54136 660 aaKnown RBP21.27■■□□□ 1
SAFB2-204ENST00000589925 FOXO4P98177 505 aa21.27■■□□□ 1
SAFB2-204ENST00000589925 PODXL2Q9NZ53 605 aa21.27■■□□□ 1
SAFB2-204ENST00000589925 POLLQ9UGP5 575 aa21.27■■□□□ 1
SAFB2-204ENST00000589925 MYH3P11055 1940 aa21.26■□□□□ 0.99
SAFB2-204ENST00000589925 FAM161AQ3B820 660 aa21.26■□□□□ 0.99
SAFB2-204ENST00000589925 NIM1KQ8IY84 436 aa21.26■□□□□ 0.99
SAFB2-204ENST00000589925 C16orf71Q8IYS4 520 aaPredicted RBP21.26■□□□□ 0.99
SAFB2-204ENST00000589925 GPC2Q8N158 579 aa21.26■□□□□ 0.99
SAFB2-204ENST00000589925 RBM46Q8TBY0 533 aaKnown RBP21.26■□□□□ 0.99
SAFB2-204ENST00000589925 C9orf78Q9NZ63 289 aaPredicted RBP21.26■□□□□ 0.99
SAFB2-204ENST00000589925 ZBED9Q6R2W3 1325 aa21.26■□□□□ 0.99
SAFB2-204ENST00000589925 ITGA6P23229 1130 aa21.25■□□□□ 0.99
SAFB2-204ENST00000589925 TBC1D16Q8TBP0 767 aa21.25■□□□□ 0.99
SAFB2-204ENST00000589925 BSDC1Q9NW68 430 aaPredicted RBP21.25■□□□□ 0.99
SAFB2-204ENST00000589925 UTYO14607 1347 aa21.25■□□□□ 0.99
SAFB2-204ENST00000589925 EIF6P56537 245 aaKnown RBP21.24■□□□□ 0.99
SAFB2-204ENST00000589925 WASHC4Q2M389 1173 aa21.24■□□□□ 0.99
SAFB2-204ENST00000589925 EPHA10Q5JZY3 1008 aa21.24■□□□□ 0.99
SAFB2-204ENST00000589925 ZNRF3Q9ULT6 936 aa21.24■□□□□ 0.99
SAFB2-204ENST00000589925 NOB1Q9ULX3 412 aaKnown RBP21.24■□□□□ 0.99
SAFB2-204ENST00000589925 NBPF7P0C2Y1 421 aaPredicted RBP21.23■□□□□ 0.99
SAFB2-204ENST00000589925 ANKIB1Q9P2G1 1089 aa21.23■□□□□ 0.99
SAFB2-204ENST00000589925 IQCA1LA6NCM1 817 aa21.22■□□□□ 0.99
SAFB2-204ENST00000589925 C6orf229H3BNL8 230 aa21.22■□□□□ 0.99
SAFB2-204ENST00000589925 KAZALD1Q96I82 304 aa21.22■□□□□ 0.99
SAFB2-204ENST00000589925 MINPP1Q9UNW1 487 aa21.22■□□□□ 0.99
SAFB2-204ENST00000589925 XDHP47989 1333 aa21.22■□□□□ 0.99
SAFB2-204ENST00000589925 IGHMBP2P38935 993 aaKnown RBP21.21■□□□□ 0.99
SAFB2-204ENST00000589925 LMBR1LQ6UX01 489 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms