RNA–Protein interactions for RNA: ENST00000589781.1

APOC1-205, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 273 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-205ENST00000589781 UTYO14607 1347 aa12.65□□□□□ -0.38
APOC1-205ENST00000589781 SRGNP10124 158 aa12.65□□□□□ -0.38
APOC1-205ENST00000589781 GPTP24298 496 aa12.65□□□□□ -0.38
APOC1-205ENST00000589781 GCKRQ14397 625 aa12.65□□□□□ -0.38
APOC1-205ENST00000589781 C8orf34Q49A92 452 aa12.65□□□□□ -0.38
APOC1-205ENST00000589781 GIGYF2Q6Y7W6 1299 aaKnown RBP12.65□□□□□ -0.38
APOC1-205ENST00000589781 ARHGAP27Q6ZUM4 889 aa12.65□□□□□ -0.38
APOC1-205ENST00000589781 CNBD1Q8NA66 436 aa12.65□□□□□ -0.38
APOC1-205ENST00000589781 EXOC6BQ9Y2D4 811 aa12.65□□□□□ -0.38
APOC1-205ENST00000589781 TNRC6CQ9HCJ0 1690 aaKnown RBP12.64□□□□□ -0.39
APOC1-205ENST00000589781 SMARCA5O60264 1052 aaPredicted RBP12.64□□□□□ -0.39
APOC1-205ENST00000589781 NTSR2O95665 410 aa12.64□□□□□ -0.39
APOC1-205ENST00000589781 RASSF7Q02833 373 aa12.64□□□□□ -0.39
APOC1-205ENST00000589781 POLA2Q14181 598 aa12.64□□□□□ -0.39
APOC1-205ENST00000589781 FAM161AQ3B820 660 aa12.64□□□□□ -0.39
APOC1-205ENST00000589781 ERFEQ4G0M1 354 aa12.64□□□□□ -0.39
APOC1-205ENST00000589781 KIF6Q6ZMV9 814 aa12.64□□□□□ -0.39
APOC1-205ENST00000589781 PPP1R42Q7Z4L9 355 aa12.64□□□□□ -0.39
APOC1-205ENST00000589781 NBPF5PQ86XG9 351 aaPredicted RBP12.64□□□□□ -0.39
APOC1-205ENST00000589781 NUTM1Q86Y26 1132 aa12.64□□□□□ -0.39
APOC1-205ENST00000589781 SYNE4Q8N205 404 aa12.64□□□□□ -0.39
APOC1-205ENST00000589781 C7orf43Q8WVR3 580 aa12.64□□□□□ -0.39
APOC1-205ENST00000589781 JARID2Q92833 1246 aaPredicted RBP12.64□□□□□ -0.39
APOC1-205ENST00000589781 BACH2Q9BYV9 841 aa12.64□□□□□ -0.39
APOC1-205ENST00000589781 BCL11AQ9H165 835 aa12.64□□□□□ -0.39
APOC1-205ENST00000589781 ARFGEF1Q9Y6D6 1849 aa12.64□□□□□ -0.39
APOC1-205ENST00000589781 H0YIN7 160 aa12.63□□□□□ -0.39
APOC1-205ENST00000589781 NFKBIEO00221 500 aa12.63□□□□□ -0.39
APOC1-205ENST00000589781 TTLL6Q8N841 843 aa12.63□□□□□ -0.39
APOC1-205ENST00000589781 SSH3Q8TE77 659 aa12.63□□□□□ -0.39
APOC1-205ENST00000589781 SRGAP3O43295 1099 aa12.62□□□□□ -0.39
APOC1-205ENST00000589781 PDE6BP35913 854 aa12.62□□□□□ -0.39
APOC1-205ENST00000589781 OLFM4Q6UX06 510 aa12.62□□□□□ -0.39
APOC1-205ENST00000589781 UBE3BQ7Z3V4 1068 aa12.62□□□□□ -0.39
APOC1-205ENST00000589781 NPM2Q86SE8 214 aaKnown RBP12.62□□□□□ -0.39
APOC1-205ENST00000589781 KAZALD1Q96I82 304 aa12.62□□□□□ -0.39
APOC1-205ENST00000589781 BICC1Q9H694 974 aaKnown RBP12.62□□□□□ -0.39
APOC1-205ENST00000589781 ZBTB47Q9UFB7 747 aaPredicted RBP12.62□□□□□ -0.39
APOC1-205ENST00000589781 ZNF652Q9Y2D9 606 aa12.62□□□□□ -0.39
APOC1-205ENST00000589781 MYH3P11055 1940 aa12.62□□□□□ -0.39
APOC1-205ENST00000589781 SLX4Q8IY92 1834 aa12.61□□□□□ -0.39
APOC1-205ENST00000589781 C21orf2O43822 256 aa12.61□□□□□ -0.39
APOC1-205ENST00000589781 EPHA10Q5JZY3 1008 aa12.61□□□□□ -0.39
APOC1-205ENST00000589781 C9orf131Q5VYM1 1079 aa12.61□□□□□ -0.39
APOC1-205ENST00000589781 TPTE2Q6XPS3 522 aa12.61□□□□□ -0.39
APOC1-205ENST00000589781 OTUD7AQ8TE49 926 aaPredicted RBP12.61□□□□□ -0.39
APOC1-205ENST00000589781 ZNF622Q969S3 477 aaKnown RBP eCLIP12.61□□□□□ -0.39
APOC1-205ENST00000589781 SNED1Q8TER0 1413 aa12.61□□□□□ -0.39
APOC1-205ENST00000589781 CASP7P55210 303 aa12.6□□□□□ -0.39
APOC1-205ENST00000589781 MTX1Q13505 466 aa12.6□□□□□ -0.39
APOC1-205ENST00000589781 CRY2Q49AN0 593 aa12.6□□□□□ -0.39
APOC1-205ENST00000589781 STYK1Q6J9G0 422 aa12.6□□□□□ -0.39
APOC1-205ENST00000589781 NLRP10Q86W26 655 aa12.6□□□□□ -0.39
APOC1-205ENST00000589781 ISCA1Q9BUE6 129 aa12.6□□□□□ -0.39
APOC1-205ENST00000589781 CWC25Q9NXE8 425 aaPredicted RBP12.6□□□□□ -0.39
APOC1-205ENST00000589781 ZNF219Q9P2Y4 722 aaPredicted RBP12.6□□□□□ -0.39
APOC1-205ENST00000589781 LAMB2P55268 1798 aa12.6□□□□□ -0.39
APOC1-205ENST00000589781 ST5P78524 1137 aa12.59□□□□□ -0.39
APOC1-205ENST00000589781 TCIRG1Q13488 830 aa12.59□□□□□ -0.39
APOC1-205ENST00000589781 PRPF40BQ6NWY9 871 aaKnown RBP12.59□□□□□ -0.39
APOC1-205ENST00000589781 C16orf71Q8IYS4 520 aaPredicted RBP12.59□□□□□ -0.39
APOC1-205ENST00000589781 MASTLQ96GX5 879 aa12.59□□□□□ -0.39
APOC1-205ENST00000589781 PA2G4Q9UQ80 394 aaKnown RBP12.59□□□□□ -0.39
APOC1-205ENST00000589781 HDAC5Q9UQL6 1122 aa12.59□□□□□ -0.39
APOC1-205ENST00000589781 AK9Q5TCS8 1911 aa12.58□□□□□ -0.39
APOC1-205ENST00000589781 COL4A1P02462 1669 aa12.58□□□□□ -0.4
APOC1-205ENST00000589781 KIF3CO14782 793 aa12.58□□□□□ -0.4
APOC1-205ENST00000589781 SURF6O75683 361 aaKnown RBP12.58□□□□□ -0.4
APOC1-205ENST00000589781 RIC1Q4ADV7 1423 aa12.58□□□□□ -0.4
APOC1-205ENST00000589781 RTL5Q5HYW3 569 aaPredicted RBP12.58□□□□□ -0.4
APOC1-205ENST00000589781 SLC10A5Q5PT55 438 aa12.58□□□□□ -0.4
APOC1-205ENST00000589781 PLEKHM2Q8IWE5 1019 aa12.58□□□□□ -0.4
APOC1-205ENST00000589781 CCDC191Q8NCU4 936 aa12.58□□□□□ -0.4
APOC1-205ENST00000589781 ZNF526Q8TF50 670 aaPredicted RBP12.58□□□□□ -0.4
APOC1-205ENST00000589781 LRRCC1Q9C099 1032 aa12.58□□□□□ -0.4
APOC1-205ENST00000589781 DDX60Q8IY21 1712 aaKnown RBP12.57□□□□□ -0.4
APOC1-205ENST00000589781 H7C1W4 665 aa12.57□□□□□ -0.4
APOC1-205ENST00000589781 NPR1P16066 1061 aa12.57□□□□□ -0.4
APOC1-205ENST00000589781 HOXA10P31260 410 aaPredicted RBP12.57□□□□□ -0.4
APOC1-205ENST00000589781 OS9Q13438 667 aaPredicted RBP12.57□□□□□ -0.4
APOC1-205ENST00000589781 RNF181Q9P0P0 153 aa12.57□□□□□ -0.4
APOC1-205ENST00000589781 SBF1O95248 1867 aa12.57□□□□□ -0.4
APOC1-205ENST00000589781 GSPT1P15170 499 aaKnown RBP12.56□□□□□ -0.4
APOC1-205ENST00000589781 PARP10Q53GL7 1025 aa12.56□□□□□ -0.4
APOC1-205ENST00000589781 CNKSR1Q969H4 720 aa12.56□□□□□ -0.4
APOC1-205ENST00000589781 IL1RAPL2Q9NP60 686 aa12.56□□□□□ -0.4
APOC1-205ENST00000589781 NMRK2Q9NPI5 230 aa12.56□□□□□ -0.4
APOC1-205ENST00000589781 SALL3Q9BXA9 1300 aa12.56□□□□□ -0.4
APOC1-205ENST00000589781 SPEF2Q9C093 1822 aa12.55□□□□□ -0.4
APOC1-205ENST00000589781 RAB11FIP3O75154 756 aa12.55□□□□□ -0.4
APOC1-205ENST00000589781 HCLS1P14317 486 aaPredicted RBP12.55□□□□□ -0.4
APOC1-205ENST00000589781 RABL6Q3YEC7 729 aaPredicted RBP12.55□□□□□ -0.4
APOC1-205ENST00000589781 HSP90AB3PQ58FF7 597 aa12.55□□□□□ -0.4
APOC1-205ENST00000589781 BMP2KLQ5H9B9 411 aa12.55□□□□□ -0.4
APOC1-205ENST00000589781 TTC22Q5TAA0 569 aa12.55□□□□□ -0.4
APOC1-205ENST00000589781 KLHDC4Q8TBB5 520 aa12.55□□□□□ -0.4
APOC1-205ENST00000589781 RHPN1Q8TCX5 695 aa12.55□□□□□ -0.4
APOC1-205ENST00000589781 UTP14AQ9BVJ6 771 aaKnown RBP12.55□□□□□ -0.4
APOC1-205ENST00000589781 NYXQ9GZU5 481 aa12.55□□□□□ -0.4
APOC1-205ENST00000589781 NOP58Q9Y2X3 529 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms