RNA–Protein interactions for RNA: ENST00000589613.1

TUBG1-203, Transcript of tubulin gamma 1, humanhuman

TSL 1 (best)

Gene TUBG1, Length 916 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBG1-203ENST00000589613 KSR2Q6VAB6 950 aa13.01□□□□□ -0.33
TUBG1-203ENST00000589613 DDX46Q7L014 1031 aaKnown RBP13.01□□□□□ -0.33
TUBG1-203ENST00000589613 ZBTB38Q8NAP3 1195 aaPredicted RBP13.01□□□□□ -0.33
TUBG1-203ENST00000589613 ATP6V0A2Q9Y487 856 aa13.01□□□□□ -0.33
TUBG1-203ENST00000589613 ABCC4O15439 1325 aa13.01□□□□□ -0.33
TUBG1-203ENST00000589613 ZNF521Q96K83 1311 aa13.01□□□□□ -0.33
TUBG1-203ENST00000589613 LTBP1Q14766 1721 aa13□□□□□ -0.33
TUBG1-203ENST00000589613 ATP5J2-PTCD1G3V325 749 aa13□□□□□ -0.33
TUBG1-203ENST00000589613 PCCAP05165 728 aaPredicted RBP13□□□□□ -0.33
TUBG1-203ENST00000589613 HCLS1P14317 486 aaPredicted RBP13□□□□□ -0.33
TUBG1-203ENST00000589613 IARSP41252 1262 aaKnown RBP13□□□□□ -0.33
TUBG1-203ENST00000589613 NEXNQ0ZGT2 675 aa13□□□□□ -0.33
TUBG1-203ENST00000589613 FSTL1Q12841 308 aa13□□□□□ -0.33
TUBG1-203ENST00000589613 GRAPQ13588 217 aa13□□□□□ -0.33
TUBG1-203ENST00000589613 C3orf67Q6ZVT6 689 aa13□□□□□ -0.33
TUBG1-203ENST00000589613 SP8Q8IXZ3 490 aa13□□□□□ -0.33
TUBG1-203ENST00000589613 SYNE4Q8N205 404 aa13□□□□□ -0.33
TUBG1-203ENST00000589613 GRAPLQ8TC17 118 aaPredicted RBP13□□□□□ -0.33
TUBG1-203ENST00000589613 RRAGCQ9HB90 399 aa13□□□□□ -0.33
TUBG1-203ENST00000589613 CWC25Q9NXE8 425 aaPredicted RBP13□□□□□ -0.33
TUBG1-203ENST00000589613 CDHR2Q9BYE9 1310 aa12.99□□□□□ -0.33
TUBG1-203ENST00000589613 SENP3-EIF4A1A0A087X0R7 540 aa12.99□□□□□ -0.33
TUBG1-203ENST00000589613 VAMP4O75379 141 aa12.99□□□□□ -0.33
TUBG1-203ENST00000589613 HSPA6P17066 643 aa12.99□□□□□ -0.33
TUBG1-203ENST00000589613 SUPT20HQ8NEM7 779 aa12.99□□□□□ -0.33
TUBG1-203ENST00000589613 FAM89AQ96GI7 184 aa12.99□□□□□ -0.33
TUBG1-203ENST00000589613 MYD88Q99836 296 aa12.99□□□□□ -0.33
TUBG1-203ENST00000589613 PI4KAP2A4QPH2 592 aa12.98□□□□□ -0.33
TUBG1-203ENST00000589613 FZD9O00144 591 aa12.98□□□□□ -0.33
TUBG1-203ENST00000589613 PITPNM1O00562 1244 aa12.98□□□□□ -0.33
TUBG1-203ENST00000589613 IRS4O14654 1257 aaPredicted RBP12.98□□□□□ -0.33
TUBG1-203ENST00000589613 EXOSC9Q06265 439 aaKnown RBP12.98□□□□□ -0.33
TUBG1-203ENST00000589613 PI4KAP1Q8N8J0 262 aa12.98□□□□□ -0.33
TUBG1-203ENST00000589613 JDP2Q8WYK2 163 aa12.98□□□□□ -0.33
TUBG1-203ENST00000589613 L3MBTL3Q96JM7 780 aaPredicted RBP12.98□□□□□ -0.33
TUBG1-203ENST00000589613 RTFDC1Q9BY42 306 aaPredicted RBP12.98□□□□□ -0.33
TUBG1-203ENST00000589613 MAP3K2Q9Y2U5 619 aa12.98□□□□□ -0.33
TUBG1-203ENST00000589613 SALL2Q9Y467 1007 aaPredicted RBP12.98□□□□□ -0.33
TUBG1-203ENST00000589613 SPEF2Q9C093 1822 aa12.97□□□□□ -0.33
TUBG1-203ENST00000589613 IQCA1LA6NCM1 817 aa12.97□□□□□ -0.33
TUBG1-203ENST00000589613 FLIIQ13045 1269 aa12.97□□□□□ -0.33
TUBG1-203ENST00000589613 OLFM4Q6UX06 510 aa12.97□□□□□ -0.33
TUBG1-203ENST00000589613 ZNF277Q9NRM2 450 aaPredicted RBP12.97□□□□□ -0.33
TUBG1-203ENST00000589613 DUOX1Q9NRD9 1551 aa12.97□□□□□ -0.33
TUBG1-203ENST00000589613 PSME4Q14997 1843 aa12.97□□□□□ -0.33
TUBG1-203ENST00000589613 ADAMTSL1Q8N6G6 1762 aa12.97□□□□□ -0.33
TUBG1-203ENST00000589613 PDE8AO60658 829 aa12.96□□□□□ -0.33
TUBG1-203ENST00000589613 PIP4P2Q8N4L2 257 aa12.96□□□□□ -0.33
TUBG1-203ENST00000589613 SMC1BQ8NDV3 1235 aa12.96□□□□□ -0.33
TUBG1-203ENST00000589613 POTECB2RU33 542 aa12.95□□□□□ -0.34
TUBG1-203ENST00000589613 E9PSI1 815 aa12.95□□□□□ -0.34
TUBG1-203ENST00000589613 IGKV5-2P06315 115 aa12.95□□□□□ -0.34
TUBG1-203ENST00000589613 FKBP5Q13451 457 aaPredicted RBP12.95□□□□□ -0.34
TUBG1-203ENST00000589613 CCDC152Q4G0S7 254 aa12.95□□□□□ -0.34
TUBG1-203ENST00000589613 DPP8Q6V1X1 898 aaPredicted RBP12.95□□□□□ -0.34
TUBG1-203ENST00000589613 G2E3Q7L622 706 aa12.95□□□□□ -0.34
TUBG1-203ENST00000589613 GPC2Q8N158 579 aa12.95□□□□□ -0.34
TUBG1-203ENST00000589613 MPNDQ8N594 471 aa12.95□□□□□ -0.34
TUBG1-203ENST00000589613 DNAAF4Q8WXU2 420 aa12.95□□□□□ -0.34
TUBG1-203ENST00000589613 ZNF428Q96B54 188 aa12.95□□□□□ -0.34
TUBG1-203ENST00000589613 COL4A5P29400 1685 aa12.95□□□□□ -0.34
TUBG1-203ENST00000589613 RTL9Q8NET4 1388 aa12.94□□□□□ -0.34
TUBG1-203ENST00000589613 NEURL1BA8MQ27 555 aa12.94□□□□□ -0.34
TUBG1-203ENST00000589613 DDNO94850 711 aaPredicted RBP12.94□□□□□ -0.34
TUBG1-203ENST00000589613 APLP1P51693 650 aa12.94□□□□□ -0.34
TUBG1-203ENST00000589613 EIF6P56537 245 aaKnown RBP12.94□□□□□ -0.34
TUBG1-203ENST00000589613 LARGE2Q8N3Y3 721 aa12.94□□□□□ -0.34
TUBG1-203ENST00000589613 LINS1Q8NG48 757 aa12.94□□□□□ -0.34
TUBG1-203ENST00000589613 COL4A1P02462 1669 aa12.93□□□□□ -0.34
TUBG1-203ENST00000589613 PPIP5K2O43314 1243 aa12.93□□□□□ -0.34
TUBG1-203ENST00000589613 RPS8P62241 208 aaKnown RBP12.93□□□□□ -0.34
TUBG1-203ENST00000589613 KIAA2012Q0VF49 1180 aa12.93□□□□□ -0.34
TUBG1-203ENST00000589613 NIM1KQ8IY84 436 aa12.93□□□□□ -0.34
TUBG1-203ENST00000589613 CELF1Q92879 486 aaKnown RBP12.93□□□□□ -0.34
TUBG1-203ENST00000589613 A0A1B0GUL6 1792 aa12.93□□□□□ -0.34
TUBG1-203ENST00000589613 ZNF541Q9H0D2 1346 aa12.92□□□□□ -0.34
TUBG1-203ENST00000589613 H7C1W4 665 aa12.92□□□□□ -0.34
TUBG1-203ENST00000589613 TCERG1O14776 1098 aaKnown RBP12.92□□□□□ -0.34
TUBG1-203ENST00000589613 RTL5Q5HYW3 569 aaPredicted RBP12.92□□□□□ -0.34
TUBG1-203ENST00000589613 PLA2G12BQ9BX93 195 aa12.92□□□□□ -0.34
TUBG1-203ENST00000589613 CTSWP56202 376 aa12.91□□□□□ -0.34
TUBG1-203ENST00000589613 SLFN5Q08AF3 891 aa12.91□□□□□ -0.34
TUBG1-203ENST00000589613 GCKRQ14397 625 aa12.91□□□□□ -0.34
TUBG1-203ENST00000589613 CWF19L2Q2TBE0 894 aaKnown RBP12.91□□□□□ -0.34
TUBG1-203ENST00000589613 PNMA8AQ86V59 439 aaPredicted RBP12.91□□□□□ -0.34
TUBG1-203ENST00000589613 EYA3Q99504 573 aa12.91□□□□□ -0.34
TUBG1-203ENST00000589613 PODXL2Q9NZ53 605 aa12.91□□□□□ -0.34
TUBG1-203ENST00000589613 HACL1Q9UJ83 578 aa12.91□□□□□ -0.34
TUBG1-203ENST00000589613 CT47B1P0C2W7 299 aaPredicted RBP12.9□□□□□ -0.34
TUBG1-203ENST00000589613 FXR2P51116 673 aaKnown RBP eCLIP12.9□□□□□ -0.34
TUBG1-203ENST00000589613 AOC3Q16853 763 aa12.9□□□□□ -0.34
TUBG1-203ENST00000589613 CDC5LQ99459 802 aaKnown RBP12.9□□□□□ -0.34
TUBG1-203ENST00000589613 TAF1DQ9H5J8 278 aaPredicted RBP12.9□□□□□ -0.34
TUBG1-203ENST00000589613 ZNRF3Q9ULT6 936 aa12.9□□□□□ -0.34
TUBG1-203ENST00000589613 TRPM7Q96QT4 1865 aa12.9□□□□□ -0.34
TUBG1-203ENST00000589613 CHADLQ6NUI6 762 aa12.89□□□□□ -0.35
TUBG1-203ENST00000589613 LDHDQ86WU2 507 aa12.89□□□□□ -0.35
TUBG1-203ENST00000589613 ANKRD18AQ8IVF6 992 aa12.89□□□□□ -0.35
TUBG1-203ENST00000589613 TRMT2AQ8IZ69 625 aaKnown RBP12.89□□□□□ -0.35
TUBG1-203ENST00000589613 TTLL11Q8NHH1 800 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms