RNA–Protein interactions for RNA: ENST00000589599.5

H3F3B-208, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3B, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-208ENST00000589599 IARSP41252 1262 aaKnown RBP21.5■■□□□ 1.03
H3F3B-208ENST00000589599 C1QTNF8P60827 252 aa21.5■■□□□ 1.03
H3F3B-208ENST00000589599 NMRK2Q9NPI5 230 aa21.5■■□□□ 1.03
H3F3B-208ENST00000589599 F6X3S4 739 aa21.49■■□□□ 1.03
H3F3B-208ENST00000589599 H7C1W4 665 aa21.49■■□□□ 1.03
H3F3B-208ENST00000589599 CT47B1P0C2W7 299 aaPredicted RBP21.49■■□□□ 1.03
H3F3B-208ENST00000589599 DPP8Q6V1X1 898 aaPredicted RBP21.49■■□□□ 1.03
H3F3B-208ENST00000589599 MRPL50Q8N5N7 158 aaKnown RBP21.49■■□□□ 1.03
H3F3B-208ENST00000589599 SUPT20HQ8NEM7 779 aa21.49■■□□□ 1.03
H3F3B-208ENST00000589599 KIF3CO14782 793 aa21.48■■□□□ 1.03
H3F3B-208ENST00000589599 RPS8P62241 208 aaKnown RBP21.48■■□□□ 1.03
H3F3B-208ENST00000589599 UBE3BQ7Z3V4 1068 aa21.48■■□□□ 1.03
H3F3B-208ENST00000589599 C16orf71Q8IYS4 520 aaPredicted RBP21.48■■□□□ 1.03
H3F3B-208ENST00000589599 MPNDQ8N594 471 aa21.48■■□□□ 1.03
H3F3B-208ENST00000589599 JDP2Q8WYK2 163 aa21.48■■□□□ 1.03
H3F3B-208ENST00000589599 RRAGCQ9HB90 399 aa21.48■■□□□ 1.03
H3F3B-208ENST00000589599 CACNA1FO60840 1977 aa21.48■■□□□ 1.03
H3F3B-208ENST00000589599 HNRNPUQ00839 825 aaKnown RBP eCLIP21.47■■□□□ 1.03
H3F3B-208ENST00000589599 ALDH1L2Q3SY69 923 aa21.47■■□□□ 1.03
H3F3B-208ENST00000589599 BEND3Q5T5X7 828 aa21.47■■□□□ 1.03
H3F3B-208ENST00000589599 SSH1Q8WYL5 1049 aa21.47■■□□□ 1.03
H3F3B-208ENST00000589599 CELF1Q92879 486 aaKnown RBP21.47■■□□□ 1.03
H3F3B-208ENST00000589599 VPS33BQ9H267 617 aa21.47■■□□□ 1.03
H3F3B-208ENST00000589599 CTSWP56202 376 aa21.46■■□□□ 1.03
H3F3B-208ENST00000589599 SLC4A10Q6U841 1118 aa21.46■■□□□ 1.03
H3F3B-208ENST00000589599 LARGE2Q8N3Y3 721 aa21.46■■□□□ 1.03
H3F3B-208ENST00000589599 SNED1Q8TER0 1413 aa21.46■■□□□ 1.03
H3F3B-208ENST00000589599 VEGFAP15692 232 aaPredicted RBP21.45■■□□□ 1.02
H3F3B-208ENST00000589599 CCDC85AQ96PX6 553 aaPredicted RBP21.45■■□□□ 1.02
H3F3B-208ENST00000589599 SEC31BQ9NQW1 1179 aa21.45■■□□□ 1.02
H3F3B-208ENST00000589599 DDX60Q8IY21 1712 aaKnown RBP21.45■■□□□ 1.02
H3F3B-208ENST00000589599 PTPRCP08575 1304 aa21.45■■□□□ 1.02
H3F3B-208ENST00000589599 SLC51AQ86UW1 340 aa21.44■■□□□ 1.02
H3F3B-208ENST00000589599 TTLL11Q8NHH1 800 aa21.44■■□□□ 1.02
H3F3B-208ENST00000589599 RTFDC1Q9BY42 306 aaPredicted RBP21.44■■□□□ 1.02
H3F3B-208ENST00000589599 SMC4Q9NTJ3 1288 aa21.44■■□□□ 1.02
H3F3B-208ENST00000589599 LAMB2P55268 1798 aa21.43■■□□□ 1.02
H3F3B-208ENST00000589599 PPIP5K2O43314 1243 aa21.43■■□□□ 1.02
H3F3B-208ENST00000589599 ALDH1L1O75891 902 aa21.43■■□□□ 1.02
H3F3B-208ENST00000589599 TOMM70O94826 608 aa21.43■■□□□ 1.02
H3F3B-208ENST00000589599 ANKRD18AQ8IVF6 992 aa21.43■■□□□ 1.02
H3F3B-208ENST00000589599 CDC5LQ99459 802 aaKnown RBP21.43■■□□□ 1.02
H3F3B-208ENST00000589599 PLA2G12BQ9BX93 195 aa21.43■■□□□ 1.02
H3F3B-208ENST00000589599 SRCIN1Q9C0H9 1055 aa21.43■■□□□ 1.02
H3F3B-208ENST00000589599 NSFL1CQ9UNZ2 370 aaKnown RBP21.43■■□□□ 1.02
H3F3B-208ENST00000589599 EIF6P56537 245 aaKnown RBP21.42■■□□□ 1.02
H3F3B-208ENST00000589599 NIM1KQ8IY84 436 aa21.42■■□□□ 1.02
H3F3B-208ENST00000589599 BCL2L13Q9BXK5 485 aa21.42■■□□□ 1.02
H3F3B-208ENST00000589599 C9orf78Q9NZ63 289 aaPredicted RBP21.42■■□□□ 1.02
H3F3B-208ENST00000589599 CCDC88AQ3V6T2 1871 aa21.41■■□□□ 1.02
H3F3B-208ENST00000589599 FZD9O00144 591 aa21.41■■□□□ 1.02
H3F3B-208ENST00000589599 DDNO94850 711 aaPredicted RBP21.41■■□□□ 1.02
H3F3B-208ENST00000589599 CASP7P55210 303 aa21.41■■□□□ 1.02
H3F3B-208ENST00000589599 GRM8O00222 908 aa21.4■■□□□ 1.02
H3F3B-208ENST00000589599 AOC3Q16853 763 aa21.4■■□□□ 1.02
H3F3B-208ENST00000589599 GREM2Q9H772 168 aa21.4■■□□□ 1.02
H3F3B-208ENST00000589599 TIAM2Q8IVF5 1701 aa21.4■■□□□ 1.02
H3F3B-208ENST00000589599 RTL9Q8NET4 1388 aa21.39■■□□□ 1.02
H3F3B-208ENST00000589599 C6orf229H3BNL8 230 aa21.39■■□□□ 1.01
H3F3B-208ENST00000589599 GPSM2P81274 684 aa21.39■■□□□ 1.01
H3F3B-208ENST00000589599 ANKIB1Q9P2G1 1089 aa21.39■■□□□ 1.01
H3F3B-208ENST00000589599 DICER1Q9UPY3 1922 aaKnown RBP21.39■■□□□ 1.01
H3F3B-208ENST00000589599 ZNF541Q9H0D2 1346 aa21.38■■□□□ 1.01
H3F3B-208ENST00000589599 CSF1RP07333 972 aa21.38■■□□□ 1.01
H3F3B-208ENST00000589599 KIAA2012Q0VF49 1180 aa21.38■■□□□ 1.01
H3F3B-208ENST00000589599 RBM46Q8TBY0 533 aaKnown RBP21.38■■□□□ 1.01
H3F3B-208ENST00000589599 EYA3Q99504 573 aa21.38■■□□□ 1.01
H3F3B-208ENST00000589599 IQCA1LA6NCM1 817 aa21.37■■□□□ 1.01
H3F3B-208ENST00000589599 IGHMBP2P38935 993 aaKnown RBP21.37■■□□□ 1.01
H3F3B-208ENST00000589599 WASHC4Q2M389 1173 aa21.37■■□□□ 1.01
H3F3B-208ENST00000589599 GPC2Q8N158 579 aa21.37■■□□□ 1.01
H3F3B-208ENST00000589599 ZNRF3Q9ULT6 936 aa21.37■■□□□ 1.01
H3F3B-208ENST00000589599 L3MBTL3Q96JM7 780 aaPredicted RBP21.36■■□□□ 1.01
H3F3B-208ENST00000589599 BSDC1Q9NW68 430 aaPredicted RBP21.36■■□□□ 1.01
H3F3B-208ENST00000589599 PODXL2Q9NZ53 605 aa21.36■■□□□ 1.01
H3F3B-208ENST00000589599 GJA3Q9Y6H8 435 aa21.36■■□□□ 1.01
H3F3B-208ENST00000589599 POTECB2RU33 542 aa21.35■■□□□ 1.01
H3F3B-208ENST00000589599 ITGA6P23229 1130 aa21.35■■□□□ 1.01
H3F3B-208ENST00000589599 RARSP54136 660 aaKnown RBP21.35■■□□□ 1.01
H3F3B-208ENST00000589599 BRPF1P55201 1214 aaPredicted RBP21.35■■□□□ 1.01
H3F3B-208ENST00000589599 TBC1D16Q8TBP0 767 aa21.35■■□□□ 1.01
H3F3B-208ENST00000589599 POLLQ9UGP5 575 aa21.35■■□□□ 1.01
H3F3B-208ENST00000589599 GGA1Q9UJY5 639 aa21.35■■□□□ 1.01
H3F3B-208ENST00000589599 NOB1Q9ULX3 412 aaKnown RBP21.35■■□□□ 1.01
H3F3B-208ENST00000589599 CHMP3Q9Y3E7 222 aa21.35■■□□□ 1.01
H3F3B-208ENST00000589599 ANKRD18BA2A2Z9 1011 aa21.34■■□□□ 1.01
H3F3B-208ENST00000589599 RIMBP2O15034 1052 aa21.34■■□□□ 1.01
H3F3B-208ENST00000589599 FOXO4P98177 505 aa21.34■■□□□ 1.01
H3F3B-208ENST00000589599 FSTL1Q12841 308 aa21.34■■□□□ 1.01
H3F3B-208ENST00000589599 IFIT5Q13325 482 aaKnown RBP21.34■■□□□ 1.01
H3F3B-208ENST00000589599 FAM161AQ3B820 660 aa21.34■■□□□ 1.01
H3F3B-208ENST00000589599 MPHOSPH8Q99549 860 aa21.34■■□□□ 1.01
H3F3B-208ENST00000589599 API5Q9BZZ5 524 aaKnown RBP21.34■■□□□ 1.01
H3F3B-208ENST00000589599 ZC3H12CQ9C0D7 883 aaKnown RBP21.34■■□□□ 1.01
H3F3B-208ENST00000589599 TAF1P21675 1872 aa21.34■■□□□ 1.01
H3F3B-208ENST00000589599 XDHP47989 1333 aa21.33■■□□□ 1.01
H3F3B-208ENST00000589599 UFL1O94874 794 aa21.33■■□□□ 1.01
H3F3B-208ENST00000589599 LMBR1LQ6UX01 489 aa21.33■■□□□ 1.01
H3F3B-208ENST00000589599 SMC1BQ8NDV3 1235 aa21.33■■□□□ 1.01
H3F3B-208ENST00000589599 ZBED9Q6R2W3 1325 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms