RNA–Protein interactions for RNA: ENST00000589214.1

ERCC1-209, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 3

Gene ERCC1, Length 674 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-209ENST00000589214 CWC25Q9NXE8 425 aaPredicted RBP19.49■□□□□ 0.71
ERCC1-209ENST00000589214 GRIPAP1Q4V328 841 aa19.48■□□□□ 0.71
ERCC1-209ENST00000589214 JARID2Q92833 1246 aaPredicted RBP19.48■□□□□ 0.71
ERCC1-209ENST00000589214 CACNA1FO60840 1977 aa19.47■□□□□ 0.71
ERCC1-209ENST00000589214 BBOX1O75936 387 aa19.47■□□□□ 0.71
ERCC1-209ENST00000589214 PCCAP05165 728 aaPredicted RBP19.47■□□□□ 0.71
ERCC1-209ENST00000589214 FLIIQ13045 1269 aa19.47■□□□□ 0.71
ERCC1-209ENST00000589214 SF3B3Q15393 1217 aaKnown RBP19.47■□□□□ 0.71
ERCC1-209ENST00000589214 DUOX1Q9NRD9 1551 aa19.46■□□□□ 0.71
ERCC1-209ENST00000589214 POTECB2RU33 542 aa19.46■□□□□ 0.71
ERCC1-209ENST00000589214 IGKV5-2P06315 115 aa19.46■□□□□ 0.71
ERCC1-209ENST00000589214 SLFN5Q08AF3 891 aa19.46■□□□□ 0.71
ERCC1-209ENST00000589214 NEXNQ0ZGT2 675 aa19.46■□□□□ 0.71
ERCC1-209ENST00000589214 LARGE2Q8N3Y3 721 aa19.46■□□□□ 0.71
ERCC1-209ENST00000589214 JDP2Q8WYK2 163 aa19.46■□□□□ 0.71
ERCC1-209ENST00000589214 CELF1Q92879 486 aaKnown RBP19.46■□□□□ 0.71
ERCC1-209ENST00000589214 PPIP5K2O43314 1243 aa19.45■□□□□ 0.7
ERCC1-209ENST00000589214 FKBP5Q13451 457 aaPredicted RBP19.45■□□□□ 0.7
ERCC1-209ENST00000589214 CWF19L2Q2TBE0 894 aaKnown RBP19.45■□□□□ 0.7
ERCC1-209ENST00000589214 DPP8Q6V1X1 898 aaPredicted RBP19.45■□□□□ 0.7
ERCC1-209ENST00000589214 SP8Q8IXZ3 490 aa19.45■□□□□ 0.7
ERCC1-209ENST00000589214 E9PSI1 815 aa19.44■□□□□ 0.7
ERCC1-209ENST00000589214 FZD9O00144 591 aa19.44■□□□□ 0.7
ERCC1-209ENST00000589214 HSP90B1P14625 803 aaKnown RBP19.44■□□□□ 0.7
ERCC1-209ENST00000589214 FSTL1Q12841 308 aa19.44■□□□□ 0.7
ERCC1-209ENST00000589214 AOC3Q16853 763 aa19.44■□□□□ 0.7
ERCC1-209ENST00000589214 MPNDQ8N594 471 aa19.44■□□□□ 0.7
ERCC1-209ENST00000589214 SMC1BQ8NDV3 1235 aa19.44■□□□□ 0.7
ERCC1-209ENST00000589214 SCN4AP35499 1836 aa19.44■□□□□ 0.7
ERCC1-209ENST00000589214 NEURL1BA8MQ27 555 aa19.43■□□□□ 0.7
ERCC1-209ENST00000589214 PDE8AO60658 829 aa19.43■□□□□ 0.7
ERCC1-209ENST00000589214 TMC4Q7Z404 712 aa19.43■□□□□ 0.7
ERCC1-209ENST00000589214 NIM1KQ8IY84 436 aa19.43■□□□□ 0.7
ERCC1-209ENST00000589214 SUPT20HQ8NEM7 779 aa19.43■□□□□ 0.7
ERCC1-209ENST00000589214 CCDC85AQ96PX6 553 aaPredicted RBP19.43■□□□□ 0.7
ERCC1-209ENST00000589214 CDHR2Q9BYE9 1310 aa19.43■□□□□ 0.7
ERCC1-209ENST00000589214 MYH3P11055 1940 aa19.43■□□□□ 0.7
ERCC1-209ENST00000589214 EIF6P56537 245 aaKnown RBP19.42■□□□□ 0.7
ERCC1-209ENST00000589214 L3MBTL3Q96JM7 780 aaPredicted RBP19.42■□□□□ 0.7
ERCC1-209ENST00000589214 IQCA1LA6NCM1 817 aa19.41■□□□□ 0.7
ERCC1-209ENST00000589214 CCDC152Q4G0S7 254 aa19.41■□□□□ 0.7
ERCC1-209ENST00000589214 DNAAF4Q8WXU2 420 aa19.41■□□□□ 0.7
ERCC1-209ENST00000589214 RTFDC1Q9BY42 306 aaPredicted RBP19.41■□□□□ 0.7
ERCC1-209ENST00000589214 SEC31BQ9NQW1 1179 aa19.41■□□□□ 0.7
ERCC1-209ENST00000589214 LTBP1Q14766 1721 aa19.41■□□□□ 0.7
ERCC1-209ENST00000589214 SPEF2Q9C093 1822 aa19.4■□□□□ 0.7
ERCC1-209ENST00000589214 APLP1P51693 650 aa19.4■□□□□ 0.7
ERCC1-209ENST00000589214 HNRNPUQ00839 825 aaKnown RBP eCLIP19.4■□□□□ 0.7
ERCC1-209ENST00000589214 GJA3Q9Y6H8 435 aa19.4■□□□□ 0.7
ERCC1-209ENST00000589214 POTEIP0CG38 1075 aa19.39■□□□□ 0.69
ERCC1-209ENST00000589214 POTEJP0CG39 1038 aa19.39■□□□□ 0.69
ERCC1-209ENST00000589214 CTSWP56202 376 aa19.39■□□□□ 0.69
ERCC1-209ENST00000589214 UBE3BQ7Z3V4 1068 aa19.39■□□□□ 0.69
ERCC1-209ENST00000589214 TRMT2AQ8IZ69 625 aaKnown RBP19.39■□□□□ 0.69
ERCC1-209ENST00000589214 GPC2Q8N158 579 aa19.39■□□□□ 0.69
ERCC1-209ENST00000589214 F6X3S4 739 aa19.38■□□□□ 0.69
ERCC1-209ENST00000589214 RPS8P62241 208 aaKnown RBP19.38■□□□□ 0.69
ERCC1-209ENST00000589214 VPS33BQ9H267 617 aa19.38■□□□□ 0.69
ERCC1-209ENST00000589214 TAF1DQ9H5J8 278 aaPredicted RBP19.38■□□□□ 0.69
ERCC1-209ENST00000589214 HACL1Q9UJ83 578 aa19.38■□□□□ 0.69
ERCC1-209ENST00000589214 NSFL1CQ9UNZ2 370 aaKnown RBP19.38■□□□□ 0.69
ERCC1-209ENST00000589214 GPSM2P81274 684 aa19.37■□□□□ 0.69
ERCC1-209ENST00000589214 KIAA2012Q0VF49 1180 aa19.37■□□□□ 0.69
ERCC1-209ENST00000589214 GCKRQ14397 625 aa19.37■□□□□ 0.69
ERCC1-209ENST00000589214 LINS1Q8NG48 757 aa19.37■□□□□ 0.69
ERCC1-209ENST00000589214 EPHX2P34913 555 aa19.36■□□□□ 0.69
ERCC1-209ENST00000589214 HTRA3P83110 453 aa19.36■□□□□ 0.69
ERCC1-209ENST00000589214 EAPPQ56P03 285 aaPredicted RBP19.36■□□□□ 0.69
ERCC1-209ENST00000589214 ADAMTSL1Q8N6G6 1762 aa19.36■□□□□ 0.69
ERCC1-209ENST00000589214 H7C1W4 665 aa19.35■□□□□ 0.69
ERCC1-209ENST00000589214 CHADLQ6NUI6 762 aa19.35■□□□□ 0.69
ERCC1-209ENST00000589214 ANKRD18AQ8IVF6 992 aa19.35■□□□□ 0.69
ERCC1-209ENST00000589214 ZNRF3Q9ULT6 936 aa19.35■□□□□ 0.69
ERCC1-209ENST00000589214 C6orf229H3BNL8 230 aa19.34■□□□□ 0.69
ERCC1-209ENST00000589214 LMOD1P29536 600 aaPredicted RBP19.34■□□□□ 0.69
ERCC1-209ENST00000589214 LDHDQ86WU2 507 aa19.34■□□□□ 0.69
ERCC1-209ENST00000589214 TTLL11Q8NHH1 800 aa19.34■□□□□ 0.69
ERCC1-209ENST00000589214 GPR101Q96P66 508 aaPredicted RBP19.34■□□□□ 0.69
ERCC1-209ENST00000589214 BCL2L13Q9BXK5 485 aa19.34■□□□□ 0.69
ERCC1-209ENST00000589214 GREM2Q9H772 168 aa19.34■□□□□ 0.69
ERCC1-209ENST00000589214 RIMBP2O15034 1052 aa19.33■□□□□ 0.68
ERCC1-209ENST00000589214 SCNN1DP51172 638 aa19.33■□□□□ 0.68
ERCC1-209ENST00000589214 WASHC4Q2M389 1173 aa19.33■□□□□ 0.68
ERCC1-209ENST00000589214 MRPL50Q8N5N7 158 aaKnown RBP19.33■□□□□ 0.68
ERCC1-209ENST00000589214 SSH1Q8WYL5 1049 aa19.33■□□□□ 0.68
ERCC1-209ENST00000589214 CDC5LQ99459 802 aaKnown RBP19.33■□□□□ 0.68
ERCC1-209ENST00000589214 POLLQ9UGP5 575 aa19.33■□□□□ 0.68
ERCC1-209ENST00000589214 RTL9Q8NET4 1388 aa19.32■□□□□ 0.68
ERCC1-209ENST00000589214 UFL1O94874 794 aa19.32■□□□□ 0.68
ERCC1-209ENST00000589214 CASP7P55210 303 aa19.32■□□□□ 0.68
ERCC1-209ENST00000589214 CXCL9Q07325 125 aa19.32■□□□□ 0.68
ERCC1-209ENST00000589214 BEND3Q5T5X7 828 aa19.32■□□□□ 0.68
ERCC1-209ENST00000589214 TBC1D16Q8TBP0 767 aa19.32■□□□□ 0.68
ERCC1-209ENST00000589214 ANKIB1Q9P2G1 1089 aa19.32■□□□□ 0.68
ERCC1-209ENST00000589214 YDJCA8MPS7 323 aa19.31■□□□□ 0.68
ERCC1-209ENST00000589214 RAD17O75943 681 aa19.31■□□□□ 0.68
ERCC1-209ENST00000589214 FAM161AQ3B820 660 aa19.31■□□□□ 0.68
ERCC1-209ENST00000589214 CIAPIN1Q6FI81 312 aa19.31■□□□□ 0.68
ERCC1-209ENST00000589214 SLC4A10Q6U841 1118 aa19.31■□□□□ 0.68
ERCC1-209ENST00000589214 EYA3Q99504 573 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms