RNA–Protein interactions for RNA: ENST00000589201.1

LINC00654-202, long intergenic non-protein coding RNA 654, humanhuman

TSL 3 BASIC

Gene LINC00654, Length 579 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-202ENST00000589201 SP8Q8IXZ3 490 aa25.31■■□□□ 1.64
LINC00654-202ENST00000589201 SSH1Q8WYL5 1049 aa25.31■■□□□ 1.64
LINC00654-202ENST00000589201 CELF1Q92879 486 aaKnown RBP25.31■■□□□ 1.64
LINC00654-202ENST00000589201 PSMD1Q99460 953 aa25.31■■□□□ 1.64
LINC00654-202ENST00000589201 TMX4Q9H1E5 349 aaPredicted RBP25.31■■□□□ 1.64
LINC00654-202ENST00000589201 CDHR2Q9BYE9 1310 aa25.31■■□□□ 1.64
LINC00654-202ENST00000589201 H7C1W4 665 aa25.3■■□□□ 1.64
LINC00654-202ENST00000589201 HNRNPUQ00839 825 aaKnown RBP eCLIP25.3■■□□□ 1.64
LINC00654-202ENST00000589201 GRIPAP1Q4V328 841 aa25.3■■□□□ 1.64
LINC00654-202ENST00000589201 NMRK2Q9NPI5 230 aa25.3■■□□□ 1.64
LINC00654-202ENST00000589201 BEND3Q5T5X7 828 aa25.29■■□□□ 1.64
LINC00654-202ENST00000589201 KDM2BQ8NHM5 1336 aa25.29■■□□□ 1.64
LINC00654-202ENST00000589201 TIAM2Q8IVF5 1701 aa25.29■■□□□ 1.64
LINC00654-202ENST00000589201 GLTPD2A6NH11 291 aa25.28■■□□□ 1.64
LINC00654-202ENST00000589201 KIF3CO14782 793 aa25.28■■□□□ 1.64
LINC00654-202ENST00000589201 IARSP41252 1262 aaKnown RBP25.28■■□□□ 1.64
LINC00654-202ENST00000589201 UBE3BQ7Z3V4 1068 aa25.28■■□□□ 1.64
LINC00654-202ENST00000589201 CCDC85AQ96PX6 553 aaPredicted RBP25.28■■□□□ 1.64
LINC00654-202ENST00000589201 BCL2L13Q9BXK5 485 aa25.28■■□□□ 1.64
LINC00654-202ENST00000589201 SEC31BQ9NQW1 1179 aa25.28■■□□□ 1.64
LINC00654-202ENST00000589201 CCDC152Q4G0S7 254 aa25.27■■□□□ 1.64
LINC00654-202ENST00000589201 ALDH1L2Q3SY69 923 aa25.26■■□□□ 1.63
LINC00654-202ENST00000589201 SLC4A10Q6U841 1118 aa25.26■■□□□ 1.63
LINC00654-202ENST00000589201 RRAGCQ9HB90 399 aa25.26■■□□□ 1.63
LINC00654-202ENST00000589201 COL4A1P02462 1669 aa25.26■■□□□ 1.63
LINC00654-202ENST00000589201 CASP7P55210 303 aa25.25■■□□□ 1.63
LINC00654-202ENST00000589201 CTSWP56202 376 aa25.25■■□□□ 1.63
LINC00654-202ENST00000589201 C1QTNF8P60827 252 aa25.25■■□□□ 1.63
LINC00654-202ENST00000589201 RPS8P62241 208 aaKnown RBP25.25■■□□□ 1.63
LINC00654-202ENST00000589201 DPY19L2Q6NUT2 758 aa25.25■■□□□ 1.63
LINC00654-202ENST00000589201 TMC4Q7Z404 712 aa25.25■■□□□ 1.63
LINC00654-202ENST00000589201 CT47B1P0C2W7 299 aaPredicted RBP25.24■■□□□ 1.63
LINC00654-202ENST00000589201 DPP8Q6V1X1 898 aaPredicted RBP25.24■■□□□ 1.63
LINC00654-202ENST00000589201 MPNDQ8N594 471 aa25.24■■□□□ 1.63
LINC00654-202ENST00000589201 TTLL11Q8NHH1 800 aa25.24■■□□□ 1.63
LINC00654-202ENST00000589201 RTFDC1Q9BY42 306 aaPredicted RBP25.22■■□□□ 1.63
LINC00654-202ENST00000589201 SMC4Q9NTJ3 1288 aa25.22■■□□□ 1.63
LINC00654-202ENST00000589201 PTPRCP08575 1304 aa25.21■■□□□ 1.63
LINC00654-202ENST00000589201 PLA2G12BQ9BX93 195 aa25.21■■□□□ 1.63
LINC00654-202ENST00000589201 DDNO94850 711 aaPredicted RBP25.2■■□□□ 1.62
LINC00654-202ENST00000589201 LARGE2Q8N3Y3 721 aa25.2■■□□□ 1.62
LINC00654-202ENST00000589201 SUPT20HQ8NEM7 779 aa25.2■■□□□ 1.62
LINC00654-202ENST00000589201 JDP2Q8WYK2 163 aa25.2■■□□□ 1.62
LINC00654-202ENST00000589201 SRCIN1Q9C0H9 1055 aa25.2■■□□□ 1.62
LINC00654-202ENST00000589201 GREM2Q9H772 168 aa25.2■■□□□ 1.62
LINC00654-202ENST00000589201 MYH3P11055 1940 aa25.2■■□□□ 1.62
LINC00654-202ENST00000589201 FZD9O00144 591 aa25.19■■□□□ 1.62
LINC00654-202ENST00000589201 ALDH1L1O75891 902 aa25.19■■□□□ 1.62
LINC00654-202ENST00000589201 AOC3Q16853 763 aa25.19■■□□□ 1.62
LINC00654-202ENST00000589201 NSFL1CQ9UNZ2 370 aaKnown RBP25.19■■□□□ 1.62
LINC00654-202ENST00000589201 COL4A5P29400 1685 aa25.19■■□□□ 1.62
LINC00654-202ENST00000589201 ZNF541Q9H0D2 1346 aa25.18■■□□□ 1.62
LINC00654-202ENST00000589201 LRRC37AA6NMS7 1700 aa25.18■■□□□ 1.62
LINC00654-202ENST00000589201 POTECB2RU33 542 aa25.18■■□□□ 1.62
LINC00654-202ENST00000589201 GRM8O00222 908 aa25.18■■□□□ 1.62
LINC00654-202ENST00000589201 PPIP5K2O43314 1243 aa25.18■■□□□ 1.62
LINC00654-202ENST00000589201 GPSM2P81274 684 aa25.18■■□□□ 1.62
LINC00654-202ENST00000589201 ANKRD18AQ8IVF6 992 aa25.18■■□□□ 1.62
LINC00654-202ENST00000589201 VPS33BQ9H267 617 aa25.18■■□□□ 1.62
LINC00654-202ENST00000589201 CSF1RP07333 972 aa25.17■■□□□ 1.62
LINC00654-202ENST00000589201 VEGFAP15692 232 aaPredicted RBP25.17■■□□□ 1.62
LINC00654-202ENST00000589201 C9orf78Q9NZ63 289 aaPredicted RBP25.17■■□□□ 1.62
LINC00654-202ENST00000589201 TOMM70O94826 608 aa25.16■■□□□ 1.62
LINC00654-202ENST00000589201 RARSP54136 660 aaKnown RBP25.16■■□□□ 1.62
LINC00654-202ENST00000589201 CDC5LQ99459 802 aaKnown RBP25.16■■□□□ 1.62
LINC00654-202ENST00000589201 NOB1Q9ULX3 412 aaKnown RBP25.16■■□□□ 1.62
LINC00654-202ENST00000589201 RTL9Q8NET4 1388 aa25.16■■□□□ 1.62
LINC00654-202ENST00000589201 FOXO4P98177 505 aa25.15■■□□□ 1.62
LINC00654-202ENST00000589201 C16orf71Q8IYS4 520 aaPredicted RBP25.15■■□□□ 1.62
LINC00654-202ENST00000589201 POLLQ9UGP5 575 aa25.15■■□□□ 1.62
LINC00654-202ENST00000589201 BRPF1P55201 1214 aaPredicted RBP25.14■■□□□ 1.62
LINC00654-202ENST00000589201 KIAA2012Q0VF49 1180 aa25.14■■□□□ 1.62
LINC00654-202ENST00000589201 FAM161AQ3B820 660 aa25.14■■□□□ 1.62
LINC00654-202ENST00000589201 NIM1KQ8IY84 436 aa25.14■■□□□ 1.62
LINC00654-202ENST00000589201 WDR90Q96KV7 1748 aa25.14■■□□□ 1.61
LINC00654-202ENST00000589201 DUOX1Q9NRD9 1551 aa25.14■■□□□ 1.61
LINC00654-202ENST00000589201 C6orf229H3BNL8 230 aa25.13■■□□□ 1.61
LINC00654-202ENST00000589201 ITGA6P23229 1130 aa25.13■■□□□ 1.61
LINC00654-202ENST00000589201 EIF6P56537 245 aaKnown RBP25.13■■□□□ 1.61
LINC00654-202ENST00000589201 EPHA10Q5JZY3 1008 aa25.13■■□□□ 1.61
LINC00654-202ENST00000589201 ZBED9Q6R2W3 1325 aa25.12■■□□□ 1.61
LINC00654-202ENST00000589201 NBPF7P0C2Y1 421 aaPredicted RBP25.12■■□□□ 1.61
LINC00654-202ENST00000589201 TBC1D16Q8TBP0 767 aa25.12■■□□□ 1.61
LINC00654-202ENST00000589201 PODXL2Q9NZ53 605 aa25.12■■□□□ 1.61
LINC00654-202ENST00000589201 ANKIB1Q9P2G1 1089 aa25.12■■□□□ 1.61
LINC00654-202ENST00000589201 WASHC4Q2M389 1173 aa25.11■■□□□ 1.61
LINC00654-202ENST00000589201 GPR101Q96P66 508 aaPredicted RBP25.11■■□□□ 1.61
LINC00654-202ENST00000589201 BSDC1Q9NW68 430 aaPredicted RBP25.11■■□□□ 1.61
LINC00654-202ENST00000589201 ZNRF3Q9ULT6 936 aa25.11■■□□□ 1.61
LINC00654-202ENST00000589201 RIMBP2O15034 1052 aa25.1■■□□□ 1.61
LINC00654-202ENST00000589201 LMBR1LQ6UX01 489 aa25.1■■□□□ 1.61
LINC00654-202ENST00000589201 GPC2Q8N158 579 aa25.1■■□□□ 1.61
LINC00654-202ENST00000589201 L3MBTL3Q96JM7 780 aaPredicted RBP25.1■■□□□ 1.61
LINC00654-202ENST00000589201 GJA3Q9Y6H8 435 aa25.1■■□□□ 1.61
LINC00654-202ENST00000589201 UTYO14607 1347 aa25.1■■□□□ 1.61
LINC00654-202ENST00000589201 LTBP1Q14766 1721 aa25.09■■□□□ 1.61
LINC00654-202ENST00000589201 IGHMBP2P38935 993 aaKnown RBP25.09■■□□□ 1.61
LINC00654-202ENST00000589201 RBM46Q8TBY0 533 aaKnown RBP25.09■■□□□ 1.61
LINC00654-202ENST00000589201 SUCLG2Q96I99 432 aa25.09■■□□□ 1.61
LINC00654-202ENST00000589201 MINPP1Q9UNW1 487 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms