RNA–Protein interactions for RNA: ENST00000589167.1

NEDD4L-226, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4L, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-226ENST00000589167 CARMIL3Q8ND23 1372 aa9.33□□□□□ -0.92
NEDD4L-226ENST00000589167 SIPA1L3O60292 1781 aaPredicted RBP9.32□□□□□ -0.92
NEDD4L-226ENST00000589167 TULP1O00294 542 aaPredicted RBP9.32□□□□□ -0.92
NEDD4L-226ENST00000589167 KCNA3P22001 575 aa9.32□□□□□ -0.92
NEDD4L-226ENST00000589167 NFIXQ14938 502 aa9.32□□□□□ -0.92
NEDD4L-226ENST00000589167 SMYD5Q6GMV2 418 aa9.32□□□□□ -0.92
NEDD4L-226ENST00000589167 ARHGAP27Q6ZUM4 889 aa9.32□□□□□ -0.92
NEDD4L-226ENST00000589167 IL17REQ8NFR9 667 aa9.32□□□□□ -0.92
NEDD4L-226ENST00000589167 ZNF496Q96IT1 587 aaPredicted RBP9.32□□□□□ -0.92
NEDD4L-226ENST00000589167 RSPH6AQ9H0K4 717 aa9.32□□□□□ -0.92
NEDD4L-226ENST00000589167 ZNF330Q9Y3S2 320 aaPredicted RBP9.32□□□□□ -0.92
NEDD4L-226ENST00000589167 HEG1Q9ULI3 1381 aa9.32□□□□□ -0.92
NEDD4L-226ENST00000589167 RNF40O75150 1001 aa9.31□□□□□ -0.92
NEDD4L-226ENST00000589167 PPP2R1AP30153 589 aa9.31□□□□□ -0.92
NEDD4L-226ENST00000589167 ZNF790Q6PG37 636 aa9.31□□□□□ -0.92
NEDD4L-226ENST00000589167 TTC13Q8NBP0 860 aa9.31□□□□□ -0.92
NEDD4L-226ENST00000589167 PHACTR3Q96KR7 559 aa9.31□□□□□ -0.92
NEDD4L-226ENST00000589167 NARFQ9UHQ1 456 aa9.31□□□□□ -0.92
NEDD4L-226ENST00000589167 CEMIPQ8WUJ3 1361 aa9.31□□□□□ -0.92
NEDD4L-226ENST00000589167 ARFGEF1Q9Y6D6 1849 aa9.31□□□□□ -0.92
NEDD4L-226ENST00000589167 NRXN2Q9P2S2 1712 aa9.31□□□□□ -0.92
NEDD4L-226ENST00000589167 KCNQ3O43525 872 aa9.3□□□□□ -0.92
NEDD4L-226ENST00000589167 STARD3NLO95772 234 aa9.3□□□□□ -0.92
NEDD4L-226ENST00000589167 U2AF1L5P0DN76 240 aaPredicted RBP9.3□□□□□ -0.92
NEDD4L-226ENST00000589167 TM4SF1P30408 202 aa9.3□□□□□ -0.92
NEDD4L-226ENST00000589167 U2AF1Q01081 240 aaKnown RBP eCLIP9.3□□□□□ -0.92
NEDD4L-226ENST00000589167 DALRD3Q5D0E6 543 aaKnown RBP9.3□□□□□ -0.92
NEDD4L-226ENST00000589167 C9orf131Q5VYM1 1079 aa9.3□□□□□ -0.92
NEDD4L-226ENST00000589167 BICDL1Q6ZP65 573 aa9.3□□□□□ -0.92
NEDD4L-226ENST00000589167 PIM2Q9P1W9 311 aa9.3□□□□□ -0.92
NEDD4L-226ENST00000589167 AFDNP55196 1824 aaKnown RBP9.3□□□□□ -0.92
NEDD4L-226ENST00000589167 EIF5P55010 431 aaKnown RBP9.29□□□□□ -0.92
NEDD4L-226ENST00000589167 RASSF7Q02833 373 aa9.29□□□□□ -0.92
NEDD4L-226ENST00000589167 NMRK2Q9NPI5 230 aa9.29□□□□□ -0.92
NEDD4L-226ENST00000589167 NUDCQ9Y266 331 aa9.29□□□□□ -0.92
NEDD4L-226ENST00000589167 COL11A2P13942 1736 aaPredicted RBP9.28□□□□□ -0.92
NEDD4L-226ENST00000589167 DLEC1Q9Y238 1755 aa9.28□□□□□ -0.92
NEDD4L-226ENST00000589167 SERPINB2P05120 415 aa9.28□□□□□ -0.92
NEDD4L-226ENST00000589167 PIP4K2AP48426 406 aaPredicted RBP9.28□□□□□ -0.92
NEDD4L-226ENST00000589167 DCTN1Q14203 1278 aa9.28□□□□□ -0.92
NEDD4L-226ENST00000589167 RBM26Q5T8P6 1007 aaKnown RBP9.28□□□□□ -0.92
NEDD4L-226ENST00000589167 TBC1D9BQ66K14 1250 aa9.28□□□□□ -0.92
NEDD4L-226ENST00000589167 MCM10Q7L590 875 aa9.28□□□□□ -0.92
NEDD4L-226ENST00000589167 FMNL2Q96PY5 1086 aa9.28□□□□□ -0.92
NEDD4L-226ENST00000589167 RNF181Q9P0P0 153 aa9.28□□□□□ -0.92
NEDD4L-226ENST00000589167 TBC1D2BQ9UPU7 963 aa9.28□□□□□ -0.92
NEDD4L-226ENST00000589167 BCORQ6W2J9 1755 aa9.27□□□□□ -0.92
NEDD4L-226ENST00000589167 A0A087WZG4 1122 aa9.27□□□□□ -0.93
NEDD4L-226ENST00000589167 PRAMEF22A3QJZ6 481 aa9.27□□□□□ -0.93
NEDD4L-226ENST00000589167 BTBD11A6QL63 1104 aa9.27□□□□□ -0.93
NEDD4L-226ENST00000589167 A1BGP04217 495 aa9.27□□□□□ -0.93
NEDD4L-226ENST00000589167 HSPA6P17066 643 aa9.27□□□□□ -0.93
NEDD4L-226ENST00000589167 TJAP1Q5JTD0 557 aa9.27□□□□□ -0.93
NEDD4L-226ENST00000589167 C2CD5Q86YS7 1000 aa9.27□□□□□ -0.93
NEDD4L-226ENST00000589167 CCDC24Q8N4L8 307 aa9.27□□□□□ -0.93
NEDD4L-226ENST00000589167 IRX2Q9BZI1 471 aaPredicted RBP9.27□□□□□ -0.93
NEDD4L-226ENST00000589167 CAMTA2O94983 1202 aa9.26□□□□□ -0.93
NEDD4L-226ENST00000589167 IL6STP40189 918 aaPredicted RBP9.26□□□□□ -0.93
NEDD4L-226ENST00000589167 SWT1Q5T5J6 900 aaKnown RBP9.26□□□□□ -0.93
NEDD4L-226ENST00000589167 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.26□□□□□ -0.93
NEDD4L-226ENST00000589167 RTF1Q92541 710 aaKnown RBP9.26□□□□□ -0.93
NEDD4L-226ENST00000589167 ANKRD31Q8N7Z5 1873 aa9.25□□□□□ -0.93
NEDD4L-226ENST00000589167 PRR5LQ6MZQ0 368 aa9.25□□□□□ -0.93
NEDD4L-226ENST00000589167 NPM2Q86SE8 214 aaKnown RBP9.25□□□□□ -0.93
NEDD4L-226ENST00000589167 MTRQ99707 1265 aa9.25□□□□□ -0.93
NEDD4L-226ENST00000589167 TEX13AQ9BXU3 409 aaPredicted RBP9.25□□□□□ -0.93
NEDD4L-226ENST00000589167 TIAM2Q8IVF5 1701 aa9.25□□□□□ -0.93
NEDD4L-226ENST00000589167 NFKBIEO00221 500 aa9.24□□□□□ -0.93
NEDD4L-226ENST00000589167 NPHP1O15259 732 aa9.24□□□□□ -0.93
NEDD4L-226ENST00000589167 APLP1P51693 650 aa9.24□□□□□ -0.93
NEDD4L-226ENST00000589167 PTGDRQ13258 359 aa9.24□□□□□ -0.93
NEDD4L-226ENST00000589167 DZIP3Q86Y13 1208 aaKnown RBP9.24□□□□□ -0.93
NEDD4L-226ENST00000589167 TTLL6Q8N841 843 aa9.24□□□□□ -0.93
NEDD4L-226ENST00000589167 CNBD1Q8NA66 436 aa9.24□□□□□ -0.93
NEDD4L-226ENST00000589167 USP16Q9Y5T5 823 aa9.24□□□□□ -0.93
NEDD4L-226ENST00000589167 LAMB4A4D0S4 1761 aa9.24□□□□□ -0.93
NEDD4L-226ENST00000589167 TNRC6CQ9HCJ0 1690 aaKnown RBP9.23□□□□□ -0.93
NEDD4L-226ENST00000589167 H0YIN7 160 aa9.23□□□□□ -0.93
NEDD4L-226ENST00000589167 TOMM70O94826 608 aa9.23□□□□□ -0.93
NEDD4L-226ENST00000589167 SNRPA1P09661 255 aaKnown RBP9.23□□□□□ -0.93
NEDD4L-226ENST00000589167 PRELPP51888 382 aa9.23□□□□□ -0.93
NEDD4L-226ENST00000589167 ZNF622Q969S3 477 aaKnown RBP eCLIP9.23□□□□□ -0.93
NEDD4L-226ENST00000589167 THUMPD2Q9BTF0 503 aaKnown RBP9.23□□□□□ -0.93
NEDD4L-226ENST00000589167 PCNTO95613 3336 aa9.23□□□□□ -0.93
NEDD4L-226ENST00000589167 KDM2BQ8NHM5 1336 aa9.23□□□□□ -0.93
NEDD4L-226ENST00000589167 LMNB1P20700 586 aa9.22□□□□□ -0.93
NEDD4L-226ENST00000589167 ST5P78524 1137 aa9.22□□□□□ -0.93
NEDD4L-226ENST00000589167 SLF2Q8IX21 1173 aa9.22□□□□□ -0.93
NEDD4L-226ENST00000589167 C16orf71Q8IYS4 520 aaPredicted RBP9.22□□□□□ -0.93
NEDD4L-226ENST00000589167 ZNF516Q92618 1163 aa9.22□□□□□ -0.93
NEDD4L-226ENST00000589167 SETDB2Q96T68 719 aa9.22□□□□□ -0.93
NEDD4L-226ENST00000589167 BRIP1Q9BX63 1249 aa9.22□□□□□ -0.93
NEDD4L-226ENST00000589167 IL21Q9HBE4 155 aa9.22□□□□□ -0.93
NEDD4L-226ENST00000589167 MIS18AQ9NYP9 233 aa9.22□□□□□ -0.93
NEDD4L-226ENST00000589167 KDM3BQ7LBC6 1761 aa9.22□□□□□ -0.93
NEDD4L-226ENST00000589167 SBF1O95248 1867 aa9.21□□□□□ -0.93
NEDD4L-226ENST00000589167 C21orf2O43822 256 aa9.21□□□□□ -0.94
NEDD4L-226ENST00000589167 NEFMP07197 916 aa9.21□□□□□ -0.94
NEDD4L-226ENST00000589167 PDE6BP35913 854 aa9.21□□□□□ -0.94
NEDD4L-226ENST00000589167 NBPF10Q6P3W6 841 aaKnown RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms