RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 HSP90B1P14625 803 aaKnown RBP14.8□□□□□ -0.04
CCBE1-203ENST00000589116 SLC27A3Q5K4L6 730 aa14.8□□□□□ -0.04
CCBE1-203ENST00000589116 GPATCH3Q96I76 525 aa14.8□□□□□ -0.04
CCBE1-203ENST00000589116 CHMP3Q9Y3E7 222 aa14.8□□□□□ -0.04
CCBE1-203ENST00000589116 SEC24BO95487 1268 aa14.79□□□□□ -0.04
CCBE1-203ENST00000589116 SDSP20132 328 aa14.79□□□□□ -0.04
CCBE1-203ENST00000589116 MTFR1LQ9H019 292 aa14.79□□□□□ -0.04
CCBE1-203ENST00000589116 SIL1Q9H173 461 aa14.79□□□□□ -0.04
CCBE1-203ENST00000589116 RTCBQ9Y3I0 505 aaKnown RBP14.79□□□□□ -0.04
CCBE1-203ENST00000589116 C4AP0C0L4 1744 aa14.79□□□□□ -0.04
CCBE1-203ENST00000589116 IRS4O14654 1257 aaPredicted RBP14.78□□□□□ -0.04
CCBE1-203ENST00000589116 GNPATO15228 680 aa14.78□□□□□ -0.04
CCBE1-203ENST00000589116 PDE8AO60658 829 aa14.78□□□□□ -0.04
CCBE1-203ENST00000589116 CIAO1O76071 339 aa14.78□□□□□ -0.04
CCBE1-203ENST00000589116 IFIT2P09913 472 aaKnown RBP14.78□□□□□ -0.04
CCBE1-203ENST00000589116 KCNQ4P56696 695 aa14.78□□□□□ -0.04
CCBE1-203ENST00000589116 CCDC57Q2TAC2 916 aa14.78□□□□□ -0.04
CCBE1-203ENST00000589116 CASC1Q6TDU7 716 aa14.78□□□□□ -0.04
CCBE1-203ENST00000589116 TBC1D9Q6ZT07 1266 aa14.78□□□□□ -0.04
CCBE1-203ENST00000589116 NUTM1Q86Y26 1132 aa14.78□□□□□ -0.04
CCBE1-203ENST00000589116 KLHDC4Q8TBB5 520 aa14.78□□□□□ -0.04
CCBE1-203ENST00000589116 UTP14AQ9BVJ6 771 aaKnown RBP14.78□□□□□ -0.04
CCBE1-203ENST00000589116 NARFQ9UHQ1 456 aa14.78□□□□□ -0.04
CCBE1-203ENST00000589116 SH3TC1Q8TE82 1336 aa14.78□□□□□ -0.04
CCBE1-203ENST00000589116 ERC2O15083 957 aa14.77□□□□□ -0.04
CCBE1-203ENST00000589116 CTSWP56202 376 aa14.77□□□□□ -0.04
CCBE1-203ENST00000589116 NIP7Q9Y221 180 aaKnown RBP eCLIP14.77□□□□□ -0.04
CCBE1-203ENST00000589116 COL24A1Q17RW2 1714 aa14.77□□□□□ -0.04
CCBE1-203ENST00000589116 AK9Q5TCS8 1911 aa14.77□□□□□ -0.04
CCBE1-203ENST00000589116 DDX60Q8IY21 1712 aaKnown RBP14.77□□□□□ -0.05
CCBE1-203ENST00000589116 GLRX3O76003 335 aaKnown RBP14.77□□□□□ -0.05
CCBE1-203ENST00000589116 IL15P40933 162 aaPredicted RBP14.77□□□□□ -0.05
CCBE1-203ENST00000589116 SUSD4Q5VX71 490 aa14.77□□□□□ -0.05
CCBE1-203ENST00000589116 AACSQ86V21 672 aa14.77□□□□□ -0.05
CCBE1-203ENST00000589116 PI4K2BQ8TCG2 481 aa14.77□□□□□ -0.05
CCBE1-203ENST00000589116 UBR3Q6ZT12 1888 aa14.76□□□□□ -0.05
CCBE1-203ENST00000589116 EYA2O00167 538 aa14.76□□□□□ -0.05
CCBE1-203ENST00000589116 NTSR2O95665 410 aa14.76□□□□□ -0.05
CCBE1-203ENST00000589116 ADRA2BP18089 450 aa14.76□□□□□ -0.05
CCBE1-203ENST00000589116 IFIT5Q13325 482 aaKnown RBP14.76□□□□□ -0.05
CCBE1-203ENST00000589116 TTLL11Q8NHH1 800 aa14.76□□□□□ -0.05
CCBE1-203ENST00000589116 TBC1D32Q96NH3 1257 aa14.76□□□□□ -0.05
CCBE1-203ENST00000589116 GPR108Q9NPR9 543 aa14.76□□□□□ -0.05
CCBE1-203ENST00000589116 ECHDC1Q9NTX5 307 aa14.76□□□□□ -0.05
CCBE1-203ENST00000589116 MFAP1P55081 439 aaKnown RBP14.75□□□□□ -0.05
CCBE1-203ENST00000589116 TSHZ3Q63HK5 1081 aa14.75□□□□□ -0.05
CCBE1-203ENST00000589116 ATG9AQ7Z3C6 839 aa14.75□□□□□ -0.05
CCBE1-203ENST00000589116 EAF2Q96CJ1 260 aaPredicted RBP14.75□□□□□ -0.05
CCBE1-203ENST00000589116 DDRGK1Q96HY6 314 aa14.75□□□□□ -0.05
CCBE1-203ENST00000589116 ZPR1O75312 459 aa14.74□□□□□ -0.05
CCBE1-203ENST00000589116 SLC15A2Q16348 729 aa14.74□□□□□ -0.05
CCBE1-203ENST00000589116 TNNI3KQ59H18 835 aa14.74□□□□□ -0.05
CCBE1-203ENST00000589116 LRRC4BQ9NT99 713 aa14.74□□□□□ -0.05
CCBE1-203ENST00000589116 FPGT-TNNI3KV9GXZ4 949 aa14.74□□□□□ -0.05
CCBE1-203ENST00000589116 RTL9Q8NET4 1388 aa14.74□□□□□ -0.05
CCBE1-203ENST00000589116 TFCP2Q12800 502 aa14.74□□□□□ -0.05
CCBE1-203ENST00000589116 TAF7LQ5H9L4 462 aa14.74□□□□□ -0.05
CCBE1-203ENST00000589116 SYNE4Q8N205 404 aa14.74□□□□□ -0.05
CCBE1-203ENST00000589116 KLHL34Q8N239 644 aa14.74□□□□□ -0.05
CCBE1-203ENST00000589116 IPO9Q96P70 1041 aaKnown RBP14.74□□□□□ -0.05
CCBE1-203ENST00000589116 SGIP1Q9BQI5 828 aa14.74□□□□□ -0.05
CCBE1-203ENST00000589116 ANKRD18BA2A2Z9 1011 aa14.73□□□□□ -0.05
CCBE1-203ENST00000589116 TRIM6-TRIM34B2RNG4 842 aa14.73□□□□□ -0.05
CCBE1-203ENST00000589116 TRAPPC3LQ5T215 181 aa14.73□□□□□ -0.05
CCBE1-203ENST00000589116 USPL1Q5W0Q7 1092 aa14.73□□□□□ -0.05
CCBE1-203ENST00000589116 CNTROBQ8N137 903 aa14.73□□□□□ -0.05
CCBE1-203ENST00000589116 PROM2Q8N271 834 aa14.73□□□□□ -0.05
CCBE1-203ENST00000589116 BCL2L12Q9HB09 334 aa14.73□□□□□ -0.05
CCBE1-203ENST00000589116 ZNF609O15014 1411 aa14.72□□□□□ -0.05
CCBE1-203ENST00000589116 ITGA6P23229 1130 aa14.72□□□□□ -0.05
CCBE1-203ENST00000589116 ARHGEF1Q92888 912 aaKnown RBP14.72□□□□□ -0.05
CCBE1-203ENST00000589116 C22orf23Q9BZE7 217 aa14.72□□□□□ -0.05
CCBE1-203ENST00000589116 NYXQ9GZU5 481 aa14.72□□□□□ -0.05
CCBE1-203ENST00000589116 GREM2Q9H772 168 aa14.72□□□□□ -0.05
CCBE1-203ENST00000589116 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.72□□□□□ -0.05
CCBE1-203ENST00000589116 SSFA2P28290 1259 aa14.71□□□□□ -0.05
CCBE1-203ENST00000589116 RFC4P35249 363 aa14.71□□□□□ -0.05
CCBE1-203ENST00000589116 TXNRD1Q16881 649 aa14.71□□□□□ -0.05
CCBE1-203ENST00000589116 ZNF594Q96JF6 807 aaPredicted RBP14.71□□□□□ -0.05
CCBE1-203ENST00000589116 CCDC8Q9H0W5 538 aaPredicted RBP14.71□□□□□ -0.05
CCBE1-203ENST00000589116 HSPA6P17066 643 aa14.71□□□□□ -0.06
CCBE1-203ENST00000589116 RBM25P49756 843 aaKnown RBP14.71□□□□□ -0.06
CCBE1-203ENST00000589116 CCDC152Q4G0S7 254 aa14.71□□□□□ -0.06
CCBE1-203ENST00000589116 LRRC24Q50LG9 513 aa14.71□□□□□ -0.06
CCBE1-203ENST00000589116 TBC1D9BQ66K14 1250 aa14.71□□□□□ -0.06
CCBE1-203ENST00000589116 RILPL2Q969X0 211 aa14.71□□□□□ -0.06
CCBE1-203ENST00000589116 CEP126Q9P2H0 1117 aa14.71□□□□□ -0.06
CCBE1-203ENST00000589116 SRP68Q9UHB9 627 aaKnown RBP14.71□□□□□ -0.06
CCBE1-203ENST00000589116 REC8O95072 547 aa14.7□□□□□ -0.06
CCBE1-203ENST00000589116 SETDB2Q96T68 719 aa14.7□□□□□ -0.06
CCBE1-203ENST00000589116 TLR7Q9NYK1 1049 aaKnown RBP14.7□□□□□ -0.06
CCBE1-203ENST00000589116 DBNLQ9UJU6 430 aaKnown RBP14.7□□□□□ -0.06
CCBE1-203ENST00000589116 AKAP2Q9Y2D5 859 aa14.7□□□□□ -0.06
CCBE1-203ENST00000589116 RIC1Q4ADV7 1423 aa14.7□□□□□ -0.06
CCBE1-203ENST00000589116 FAM177BA6PVY3 158 aa14.69□□□□□ -0.06
CCBE1-203ENST00000589116 HCLS1P14317 486 aaPredicted RBP14.69□□□□□ -0.06
CCBE1-203ENST00000589116 ATP5JP18859 108 aa14.69□□□□□ -0.06
CCBE1-203ENST00000589116 CHMLP26374 656 aa14.69□□□□□ -0.06
CCBE1-203ENST00000589116 AMIGO3Q86WK7 504 aa14.69□□□□□ -0.06
CCBE1-203ENST00000589116 CCDC85AQ96PX6 553 aaPredicted RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms