RNA–Protein interactions for RNA: ENST00000589007.5

RETREG3-207, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 3

Gene RETREG3, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-207ENST00000589007 VPS33BQ9H267 617 aa11.36□□□□□ -0.59
RETREG3-207ENST00000589007 ATP6V0A2Q9Y487 856 aa11.36□□□□□ -0.59
RETREG3-207ENST00000589007 SPTBN5Q9NRC6 3674 aaKnown RBP11.36□□□□□ -0.59
RETREG3-207ENST00000589007 RAD17O75943 681 aa11.35□□□□□ -0.59
RETREG3-207ENST00000589007 GRIPAP1Q4V328 841 aa11.35□□□□□ -0.59
RETREG3-207ENST00000589007 TTLL7Q6ZT98 887 aa11.35□□□□□ -0.59
RETREG3-207ENST00000589007 SAMD7Q7Z3H4 446 aa11.35□□□□□ -0.59
RETREG3-207ENST00000589007 LRP10Q7Z4F1 713 aa11.35□□□□□ -0.59
RETREG3-207ENST00000589007 MICALL2Q8IY33 904 aa11.35□□□□□ -0.59
RETREG3-207ENST00000589007 ZNF296Q8WUU4 475 aaPredicted RBP11.35□□□□□ -0.59
RETREG3-207ENST00000589007 GCC1Q96CN9 775 aa11.35□□□□□ -0.59
RETREG3-207ENST00000589007 UNC80Q8N2C7 3258 aa11.35□□□□□ -0.59
RETREG3-207ENST00000589007 ZSWIM8A7E2V4 1837 aa11.35□□□□□ -0.59
RETREG3-207ENST00000589007 POTEFA5A3E0 1075 aa11.34□□□□□ -0.59
RETREG3-207ENST00000589007 BTBD11A6QL63 1104 aa11.34□□□□□ -0.59
RETREG3-207ENST00000589007 ZNF34Q8IZ26 560 aa11.34□□□□□ -0.59
RETREG3-207ENST00000589007 R3HDMLQ9H3Y0 253 aa11.34□□□□□ -0.59
RETREG3-207ENST00000589007 CNOT7Q9UIV1 285 aaKnown RBP11.34□□□□□ -0.59
RETREG3-207ENST00000589007 ZBTB12Q9Y330 459 aaPredicted RBP11.34□□□□□ -0.59
RETREG3-207ENST00000589007 OTOFQ9HC10 1997 aa11.34□□□□□ -0.59
RETREG3-207ENST00000589007 MAP3K15Q6ZN16 1313 aa11.34□□□□□ -0.59
RETREG3-207ENST00000589007 TCERG1O14776 1098 aaKnown RBP11.33□□□□□ -0.6
RETREG3-207ENST00000589007 SNRPA1P09661 255 aaKnown RBP11.33□□□□□ -0.6
RETREG3-207ENST00000589007 NOM1Q5C9Z4 860 aaKnown RBP11.33□□□□□ -0.6
RETREG3-207ENST00000589007 GAS2L2Q8NHY3 880 aa11.33□□□□□ -0.6
RETREG3-207ENST00000589007 CCDC102AQ96A19 550 aa11.33□□□□□ -0.6
RETREG3-207ENST00000589007 ERVV-1B6SEH8 477 aa11.32□□□□□ -0.6
RETREG3-207ENST00000589007 DIAPH1O60610 1272 aaKnown RBP11.32□□□□□ -0.6
RETREG3-207ENST00000589007 ZNF157P51786 506 aaPredicted RBP11.32□□□□□ -0.6
RETREG3-207ENST00000589007 CAP1Q01518 475 aa11.32□□□□□ -0.6
RETREG3-207ENST00000589007 FBXO46Q6PJ61 603 aaPredicted RBP11.32□□□□□ -0.6
RETREG3-207ENST00000589007 KRT26Q7Z3Y9 468 aa11.32□□□□□ -0.6
RETREG3-207ENST00000589007 RPGRQ92834 1020 aaKnown RBP11.32□□□□□ -0.6
RETREG3-207ENST00000589007 CFHR5Q9BXR6 569 aa11.32□□□□□ -0.6
RETREG3-207ENST00000589007 RSPH6AQ9H0K4 717 aa11.32□□□□□ -0.6
RETREG3-207ENST00000589007 ECM29Q5VYK3 1845 aa11.31□□□□□ -0.6
RETREG3-207ENST00000589007 PSMD14O00487 310 aa11.31□□□□□ -0.6
RETREG3-207ENST00000589007 PER1O15534 1290 aaPredicted RBP11.31□□□□□ -0.6
RETREG3-207ENST00000589007 GPTP24298 496 aa11.31□□□□□ -0.6
RETREG3-207ENST00000589007 PKN2Q16513 984 aaKnown RBP11.31□□□□□ -0.6
RETREG3-207ENST00000589007 TBC1D10BQ4KMP7 808 aaPredicted RBP11.31□□□□□ -0.6
RETREG3-207ENST00000589007 DPF2Q92785 391 aa11.31□□□□□ -0.6
RETREG3-207ENST00000589007 CDCA5Q96FF9 252 aa11.31□□□□□ -0.6
RETREG3-207ENST00000589007 NYXQ9GZU5 481 aa11.31□□□□□ -0.6
RETREG3-207ENST00000589007 TBC1D8O95759 1140 aa11.3□□□□□ -0.6
RETREG3-207ENST00000589007 SLC10A5Q5PT55 438 aa11.3□□□□□ -0.6
RETREG3-207ENST00000589007 RBM17Q96I25 401 aaKnown RBP11.3□□□□□ -0.6
RETREG3-207ENST00000589007 POLR3GLQ9BT43 218 aa11.3□□□□□ -0.6
RETREG3-207ENST00000589007 KCNQ5Q9NR82 932 aa11.3□□□□□ -0.6
RETREG3-207ENST00000589007 GPR25O00155 361 aa11.29□□□□□ -0.6
RETREG3-207ENST00000589007 HSPA5P11021 654 aaKnown RBP11.29□□□□□ -0.6
RETREG3-207ENST00000589007 MOB2Q70IA6 237 aa11.29□□□□□ -0.6
RETREG3-207ENST00000589007 MCM10Q7L590 875 aa11.29□□□□□ -0.6
RETREG3-207ENST00000589007 GGA3Q9NZ52 723 aa11.29□□□□□ -0.6
RETREG3-207ENST00000589007 VCANP13611 3396 aa11.28□□□□□ -0.6
RETREG3-207ENST00000589007 DCTN1Q14203 1278 aa11.28□□□□□ -0.6
RETREG3-207ENST00000589007 SP8Q8IXZ3 490 aa11.28□□□□□ -0.6
RETREG3-207ENST00000589007 C2orf69Q8N8R5 385 aa11.28□□□□□ -0.6
RETREG3-207ENST00000589007 BCL2L13Q9BXK5 485 aa11.28□□□□□ -0.6
RETREG3-207ENST00000589007 COLQQ9Y215 455 aaPredicted RBP11.28□□□□□ -0.6
RETREG3-207ENST00000589007 SSC5DA1L4H1 1573 aa11.28□□□□□ -0.6
RETREG3-207ENST00000589007 SPEF2Q9C093 1822 aa11.28□□□□□ -0.6
RETREG3-207ENST00000589007 TM4SF4P48230 202 aa11.27□□□□□ -0.61
RETREG3-207ENST00000589007 TNIP1Q15025 636 aa11.27□□□□□ -0.61
RETREG3-207ENST00000589007 DPP8Q6V1X1 898 aaPredicted RBP11.27□□□□□ -0.61
RETREG3-207ENST00000589007 GIGYF2Q6Y7W6 1299 aaKnown RBP11.27□□□□□ -0.61
RETREG3-207ENST00000589007 SUPT20HQ8NEM7 779 aa11.27□□□□□ -0.61
RETREG3-207ENST00000589007 OTUD5Q96G74 571 aa11.27□□□□□ -0.61
RETREG3-207ENST00000589007 ZBTB3Q9H5J0 574 aa11.27□□□□□ -0.61
RETREG3-207ENST00000589007 A0A1B0GUL6 1792 aa11.26□□□□□ -0.61
RETREG3-207ENST00000589007 PRKAR2BP31323 418 aa11.26□□□□□ -0.61
RETREG3-207ENST00000589007 KIF4BQ2VIQ3 1234 aa11.26□□□□□ -0.61
RETREG3-207ENST00000589007 MPNDQ8N594 471 aa11.26□□□□□ -0.61
RETREG3-207ENST00000589007 DBNDD1Q9H9R9 158 aa11.26□□□□□ -0.61
RETREG3-207ENST00000589007 ALPK3Q96L96 1907 aa11.26□□□□□ -0.61
RETREG3-207ENST00000589007 H7C1D1 291 aa11.25□□□□□ -0.61
RETREG3-207ENST00000589007 GTF2E1P29083 439 aaPredicted RBP11.25□□□□□ -0.61
RETREG3-207ENST00000589007 ZNF280AP59817 542 aaPredicted RBP11.25□□□□□ -0.61
RETREG3-207ENST00000589007 PDIA6Q15084 440 aa11.25□□□□□ -0.61
RETREG3-207ENST00000589007 NPM2Q86SE8 214 aaKnown RBP11.25□□□□□ -0.61
RETREG3-207ENST00000589007 REM2Q8IYK8 340 aaPredicted RBP11.25□□□□□ -0.61
RETREG3-207ENST00000589007 POLLQ9UGP5 575 aa11.25□□□□□ -0.61
RETREG3-207ENST00000589007 RPS12P25398 132 aaKnown RBP11.24□□□□□ -0.61
RETREG3-207ENST00000589007 GRAPQ13588 217 aa11.24□□□□□ -0.61
RETREG3-207ENST00000589007 GRAPLQ8TC17 118 aaPredicted RBP11.24□□□□□ -0.61
RETREG3-207ENST00000589007 GMLQ99445 158 aa11.24□□□□□ -0.61
RETREG3-207ENST00000589007 PRO3102Q9H379 93 aa11.24□□□□□ -0.61
RETREG3-207ENST00000589007 MIS18AQ9NYP9 233 aa11.24□□□□□ -0.61
RETREG3-207ENST00000589007 SCAF8Q9UPN6 1271 aaKnown RBP11.24□□□□□ -0.61
RETREG3-207ENST00000589007 KNSTRNQ9Y448 316 aa11.24□□□□□ -0.61
RETREG3-207ENST00000589007 EN2P19622 333 aaPredicted RBP11.23□□□□□ -0.61
RETREG3-207ENST00000589007 FKBP1BP68106 108 aa11.23□□□□□ -0.61
RETREG3-207ENST00000589007 PROSER3Q2NL68 480 aa11.23□□□□□ -0.61
RETREG3-207ENST00000589007 OTOP1Q7RTM1 612 aa11.23□□□□□ -0.61
RETREG3-207ENST00000589007 NGEFQ8N5V2 710 aa11.23□□□□□ -0.61
RETREG3-207ENST00000589007 ARMC5Q96C12 935 aa11.23□□□□□ -0.61
RETREG3-207ENST00000589007 PITPNM2Q9BZ72 1349 aa11.23□□□□□ -0.61
RETREG3-207ENST00000589007 EYSQ5T1H1 3165 aa11.23□□□□□ -0.61
RETREG3-207ENST00000589007 U2SURPO15042 1029 aaKnown RBP11.22□□□□□ -0.61
RETREG3-207ENST00000589007 ECE2O60344 883 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms