RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 HAUS7Q99871 368 aa18.35■□□□□ 0.53
MBD1-217ENST00000588937 LIMCH1Q9UPQ0 1083 aa18.35■□□□□ 0.53
MBD1-217ENST00000588937 EYA2O00167 538 aa18.35■□□□□ 0.53
MBD1-217ENST00000588937 NOL8Q76FK4 1167 aaKnown RBP18.35■□□□□ 0.53
MBD1-217ENST00000588937 ZNF330Q9Y3S2 320 aaPredicted RBP18.35■□□□□ 0.53
MBD1-217ENST00000588937 MAP3K15Q6ZN16 1313 aa18.34■□□□□ 0.53
MBD1-217ENST00000588937 MED23Q9ULK4 1368 aa18.34■□□□□ 0.53
MBD1-217ENST00000588937 FSD2A1L4K1 749 aa18.34■□□□□ 0.53
MBD1-217ENST00000588937 PCCAP05165 728 aaPredicted RBP18.34■□□□□ 0.53
MBD1-217ENST00000588937 CASTP20810 708 aaKnown RBP18.34■□□□□ 0.53
MBD1-217ENST00000588937 PSMA5P28066 241 aa18.34■□□□□ 0.53
MBD1-217ENST00000588937 PKP1Q13835 747 aa18.34■□□□□ 0.53
MBD1-217ENST00000588937 VPS53Q5VIR6 699 aa18.34■□□□□ 0.53
MBD1-217ENST00000588937 MCTP1Q6DN14 999 aa18.34■□□□□ 0.53
MBD1-217ENST00000588937 ATG9AQ7Z3C6 839 aa18.34■□□□□ 0.53
MBD1-217ENST00000588937 DBNDD2Q9BQY9 259 aa18.34■□□□□ 0.53
MBD1-217ENST00000588937 PLA2G12BQ9BX93 195 aa18.34■□□□□ 0.53
MBD1-217ENST00000588937 USP21Q9UK80 565 aa18.34■□□□□ 0.53
MBD1-217ENST00000588937 RBM8AQ9Y5S9 174 aaKnown RBP18.34■□□□□ 0.53
MBD1-217ENST00000588937 CYP46A1Q9Y6A2 500 aa18.34■□□□□ 0.53
MBD1-217ENST00000588937 THSD7AQ9UPZ6 1657 aa18.33■□□□□ 0.53
MBD1-217ENST00000588937 CCDC57Q2TAC2 916 aa18.33■□□□□ 0.53
MBD1-217ENST00000588937 KLHL40Q2TBA0 621 aa18.33■□□□□ 0.53
MBD1-217ENST00000588937 ZSCAN31Q96LW9 406 aaPredicted RBP18.33■□□□□ 0.53
MBD1-217ENST00000588937 ZSWIM6Q9HCJ5 1215 aa18.33■□□□□ 0.53
MBD1-217ENST00000588937 ZDHHC9Q9Y397 364 aa18.33■□□□□ 0.53
MBD1-217ENST00000588937 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.33■□□□□ 0.53
MBD1-217ENST00000588937 A0A0D9SFI3 127 aa18.32■□□□□ 0.52
MBD1-217ENST00000588937 AK2P54819 239 aa18.32■□□□□ 0.52
MBD1-217ENST00000588937 CREB3L3Q68CJ9 461 aa18.32■□□□□ 0.52
MBD1-217ENST00000588937 GIGYF2Q6Y7W6 1299 aaKnown RBP18.32■□□□□ 0.52
MBD1-217ENST00000588937 ZBTB38Q8NAP3 1195 aaPredicted RBP18.32■□□□□ 0.52
MBD1-217ENST00000588937 JAKMIP1Q96N16 626 aaKnown RBP18.32■□□□□ 0.52
MBD1-217ENST00000588937 HMG20BQ9P0W2 317 aa18.32■□□□□ 0.52
MBD1-217ENST00000588937 BRD1O95696 1058 aa18.32■□□□□ 0.52
MBD1-217ENST00000588937 PDRG1Q9NUG6 133 aa18.32■□□□□ 0.52
MBD1-217ENST00000588937 DDX49Q9Y6V7 483 aaKnown RBP18.32■□□□□ 0.52
MBD1-217ENST00000588937 CYP19A1P11511 503 aaPredicted RBP18.31■□□□□ 0.52
MBD1-217ENST00000588937 RUFY3Q7L099 469 aa18.31■□□□□ 0.52
MBD1-217ENST00000588937 NEUROD6Q96NK8 337 aa18.31■□□□□ 0.52
MBD1-217ENST00000588937 SH2B1Q9NRF2 756 aaPredicted RBP18.31■□□□□ 0.52
MBD1-217ENST00000588937 DOT1LQ8TEK3 1739 aa18.31■□□□□ 0.52
MBD1-217ENST00000588937 ATRNO75882 1429 aa18.3■□□□□ 0.52
MBD1-217ENST00000588937 CDHR2Q9BYE9 1310 aa18.3■□□□□ 0.52
MBD1-217ENST00000588937 DNAJC2Q99543 621 aaKnown RBP18.3■□□□□ 0.52
MBD1-217ENST00000588937 CCDC9Q9Y3X0 531 aaKnown RBP18.3■□□□□ 0.52
MBD1-217ENST00000588937 ZNF609O15014 1411 aa18.3■□□□□ 0.52
MBD1-217ENST00000588937 ANKRD36CQ5JPF3 1778 aa18.3■□□□□ 0.52
MBD1-217ENST00000588937 WDR33Q9C0J8 1336 aaKnown RBP18.3■□□□□ 0.52
MBD1-217ENST00000588937 SLC27A2O14975 620 aa18.3■□□□□ 0.52
MBD1-217ENST00000588937 ONECUT3O60422 494 aaPredicted RBP18.3■□□□□ 0.52
MBD1-217ENST00000588937 MRE11P49959 708 aa18.3■□□□□ 0.52
MBD1-217ENST00000588937 KBTBD3Q8NAB2 608 aa18.3■□□□□ 0.52
MBD1-217ENST00000588937 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.3■□□□□ 0.52
MBD1-217ENST00000588937 SYTL4Q96C24 671 aaPredicted RBP18.3■□□□□ 0.52
MBD1-217ENST00000588937 ARXQ96QS3 562 aa18.3■□□□□ 0.52
MBD1-217ENST00000588937 CEP126Q9P2H0 1117 aa18.3■□□□□ 0.52
MBD1-217ENST00000588937 AKAP2Q9Y2D5 859 aa18.3■□□□□ 0.52
MBD1-217ENST00000588937 SPEF2Q9C093 1822 aa18.29■□□□□ 0.52
MBD1-217ENST00000588937 PALLDQ8WX93 1383 aa18.29■□□□□ 0.52
MBD1-217ENST00000588937 TSGA10IPQ3SY00 556 aa18.29■□□□□ 0.52
MBD1-217ENST00000588937 MARCH10Q8NA82 808 aaPredicted RBP18.29■□□□□ 0.52
MBD1-217ENST00000588937 LMBRD1Q9NUN5 540 aa18.29■□□□□ 0.52
MBD1-217ENST00000588937 RPAP1Q9BWH6 1393 aaPredicted RBP18.28■□□□□ 0.52
MBD1-217ENST00000588937 AFF2P51816 1311 aa18.28■□□□□ 0.52
MBD1-217ENST00000588937 ERVV-1B6SEH8 477 aa18.28■□□□□ 0.52
MBD1-217ENST00000588937 TAF5LO75529 589 aa18.28■□□□□ 0.52
MBD1-217ENST00000588937 CSF1RP07333 972 aa18.28■□□□□ 0.52
MBD1-217ENST00000588937 IL6STP40189 918 aaPredicted RBP18.28■□□□□ 0.52
MBD1-217ENST00000588937 KRT32Q14532 448 aa18.28■□□□□ 0.52
MBD1-217ENST00000588937 ANKRD1Q15327 319 aa18.28■□□□□ 0.52
MBD1-217ENST00000588937 ADCK5Q3MIX3 580 aa18.28■□□□□ 0.52
MBD1-217ENST00000588937 MCMDC2Q4G0Z9 681 aa18.28■□□□□ 0.52
MBD1-217ENST00000588937 LRRC24Q50LG9 513 aa18.28■□□□□ 0.52
MBD1-217ENST00000588937 MEX3CQ5U5Q3 659 aaKnown RBP18.28■□□□□ 0.52
MBD1-217ENST00000588937 IFIT5Q13325 482 aaKnown RBP18.27■□□□□ 0.52
MBD1-217ENST00000588937 TAF7LQ5H9L4 462 aa18.27■□□□□ 0.52
MBD1-217ENST00000588937 EDC3Q96F86 508 aaKnown RBP18.27■□□□□ 0.52
MBD1-217ENST00000588937 ZNF594Q96JF6 807 aaPredicted RBP18.27■□□□□ 0.52
MBD1-217ENST00000588937 GJD4Q96KN9 370 aaPredicted RBP18.27■□□□□ 0.52
MBD1-217ENST00000588937 ALDH8A1Q9H2A2 487 aaPredicted RBP18.27■□□□□ 0.52
MBD1-217ENST00000588937 PAG1Q9NWQ8 432 aa18.27■□□□□ 0.52
MBD1-217ENST00000588937 SH3TC1Q8TE82 1336 aa18.27■□□□□ 0.52
MBD1-217ENST00000588937 KAT6BQ8WYB5 2073 aa18.27■□□□□ 0.52
MBD1-217ENST00000588937 PRIM1P49642 420 aaKnown RBP18.27■□□□□ 0.51
MBD1-217ENST00000588937 TIMM10P62072 90 aa18.27■□□□□ 0.51
MBD1-217ENST00000588937 FAM98CQ17RN3 349 aaKnown RBP18.27■□□□□ 0.51
MBD1-217ENST00000588937 USPL1Q5W0Q7 1092 aa18.27■□□□□ 0.51
MBD1-217ENST00000588937 NLRP10Q86W26 655 aa18.27■□□□□ 0.51
MBD1-217ENST00000588937 FAM89AQ96GI7 184 aa18.27■□□□□ 0.51
MBD1-217ENST00000588937 U3KPZ7 1027 aaPredicted RBP18.27■□□□□ 0.51
MBD1-217ENST00000588937 A0A1B0GUL7 405 aa18.26■□□□□ 0.51
MBD1-217ENST00000588937 LRRFIP1Q32MZ4 808 aaKnown RBP18.26■□□□□ 0.51
MBD1-217ENST00000588937 BLOC1S2Q6QNY1 142 aa18.26■□□□□ 0.51
MBD1-217ENST00000588937 ZNF589Q86UQ0 364 aaPredicted RBP18.26■□□□□ 0.51
MBD1-217ENST00000588937 SLC4A9Q96Q91 983 aa18.26■□□□□ 0.51
MBD1-217ENST00000588937 HELLSQ9NRZ9 838 aa18.26■□□□□ 0.51
MBD1-217ENST00000588937 TRPC5Q9UL62 973 aaPredicted RBP18.26■□□□□ 0.51
MBD1-217ENST00000588937 SMC3Q9UQE7 1217 aa18.26■□□□□ 0.51
MBD1-217ENST00000588937 IFIT1P09914 478 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 153.7 ms