RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 PSMD1Q99460 953 aa14.84□□□□□ -0.03
RFX1-204ENST00000588885 CHMP4AQ9BY43 222 aa14.84□□□□□ -0.03
RFX1-204ENST00000588885 ATP6V0A2Q9Y487 856 aa14.84□□□□□ -0.03
RFX1-204ENST00000588885 ZNF541Q9H0D2 1346 aa14.84□□□□□ -0.03
RFX1-204ENST00000588885 RIC1Q4ADV7 1423 aa14.83□□□□□ -0.03
RFX1-204ENST00000588885 PI4KAP2A4QPH2 592 aa14.83□□□□□ -0.04
RFX1-204ENST00000588885 BBOX1O75936 387 aa14.83□□□□□ -0.04
RFX1-204ENST00000588885 TRIM28Q13263 835 aaKnown RBP14.83□□□□□ -0.04
RFX1-204ENST00000588885 POLA2Q14181 598 aa14.83□□□□□ -0.04
RFX1-204ENST00000588885 PI4KAP1Q8N8J0 262 aa14.83□□□□□ -0.04
RFX1-204ENST00000588885 METTL22Q9BUU2 404 aaPredicted RBP14.83□□□□□ -0.04
RFX1-204ENST00000588885 HAX1O00165 279 aa14.82□□□□□ -0.04
RFX1-204ENST00000588885 HTRA3P83110 453 aa14.82□□□□□ -0.04
RFX1-204ENST00000588885 GRAPQ13588 217 aa14.82□□□□□ -0.04
RFX1-204ENST00000588885 KSR2Q6VAB6 950 aa14.82□□□□□ -0.04
RFX1-204ENST00000588885 LARGE2Q8N3Y3 721 aa14.82□□□□□ -0.04
RFX1-204ENST00000588885 PIP4P2Q8N4L2 257 aa14.82□□□□□ -0.04
RFX1-204ENST00000588885 GRAPLQ8TC17 118 aaPredicted RBP14.82□□□□□ -0.04
RFX1-204ENST00000588885 JDP2Q8WYK2 163 aa14.82□□□□□ -0.04
RFX1-204ENST00000588885 SCN4AP35499 1836 aa14.81□□□□□ -0.04
RFX1-204ENST00000588885 VAMP4O75379 141 aa14.81□□□□□ -0.04
RFX1-204ENST00000588885 DPP8Q6V1X1 898 aaPredicted RBP14.81□□□□□ -0.04
RFX1-204ENST00000588885 SP8Q8IXZ3 490 aa14.81□□□□□ -0.04
RFX1-204ENST00000588885 ZBTB38Q8NAP3 1195 aaPredicted RBP14.81□□□□□ -0.04
RFX1-204ENST00000588885 CELF1Q92879 486 aaKnown RBP14.81□□□□□ -0.04
RFX1-204ENST00000588885 CCDC85AQ96PX6 553 aaPredicted RBP14.81□□□□□ -0.04
RFX1-204ENST00000588885 CWC25Q9NXE8 425 aaPredicted RBP14.81□□□□□ -0.04
RFX1-204ENST00000588885 GJA3Q9Y6H8 435 aa14.81□□□□□ -0.04
RFX1-204ENST00000588885 FZD9O00144 591 aa14.8□□□□□ -0.04
RFX1-204ENST00000588885 PPIP5K2O43314 1243 aa14.8□□□□□ -0.04
RFX1-204ENST00000588885 SF3B3Q15393 1217 aaKnown RBP14.8□□□□□ -0.04
RFX1-204ENST00000588885 AOC3Q16853 763 aa14.8□□□□□ -0.04
RFX1-204ENST00000588885 GRIPAP1Q4V328 841 aa14.8□□□□□ -0.04
RFX1-204ENST00000588885 MPNDQ8N594 471 aa14.8□□□□□ -0.04
RFX1-204ENST00000588885 CCDC191Q8NCU4 936 aa14.8□□□□□ -0.04
RFX1-204ENST00000588885 ANKRD36CQ5JPF3 1778 aa14.8□□□□□ -0.04
RFX1-204ENST00000588885 PCCAP05165 728 aaPredicted RBP14.79□□□□□ -0.04
RFX1-204ENST00000588885 IGKV5-2P06315 115 aa14.79□□□□□ -0.04
RFX1-204ENST00000588885 POTEIP0CG38 1075 aa14.79□□□□□ -0.04
RFX1-204ENST00000588885 POTEJP0CG39 1038 aa14.79□□□□□ -0.04
RFX1-204ENST00000588885 EIF6P56537 245 aaKnown RBP14.79□□□□□ -0.04
RFX1-204ENST00000588885 CWF19L2Q2TBE0 894 aaKnown RBP14.79□□□□□ -0.04
RFX1-204ENST00000588885 IFFO2Q5TF58 517 aa14.79□□□□□ -0.04
RFX1-204ENST00000588885 SNED1Q8TER0 1413 aa14.79□□□□□ -0.04
RFX1-204ENST00000588885 SEC31BQ9NQW1 1179 aa14.79□□□□□ -0.04
RFX1-204ENST00000588885 NEXNQ0ZGT2 675 aa14.78□□□□□ -0.04
RFX1-204ENST00000588885 FLIIQ13045 1269 aa14.78□□□□□ -0.04
RFX1-204ENST00000588885 FKBP5Q13451 457 aaPredicted RBP14.78□□□□□ -0.04
RFX1-204ENST00000588885 NIM1KQ8IY84 436 aa14.78□□□□□ -0.04
RFX1-204ENST00000588885 KLRG1Q96E93 195 aa14.78□□□□□ -0.04
RFX1-204ENST00000588885 MYH16Q9H6N6 1097 aa14.78□□□□□ -0.04
RFX1-204ENST00000588885 HNRNPUQ00839 825 aaKnown RBP eCLIP14.77□□□□□ -0.05
RFX1-204ENST00000588885 EAPPQ56P03 285 aaPredicted RBP14.77□□□□□ -0.05
RFX1-204ENST00000588885 SUPT20HQ8NEM7 779 aa14.77□□□□□ -0.05
RFX1-204ENST00000588885 TAF1DQ9H5J8 278 aaPredicted RBP14.77□□□□□ -0.05
RFX1-204ENST00000588885 NSFL1CQ9UNZ2 370 aaKnown RBP14.77□□□□□ -0.05
RFX1-204ENST00000588885 IQCA1LA6NCM1 817 aa14.76□□□□□ -0.05
RFX1-204ENST00000588885 NEURL1BA8MQ27 555 aa14.76□□□□□ -0.05
RFX1-204ENST00000588885 PDE8AO60658 829 aa14.76□□□□□ -0.05
RFX1-204ENST00000588885 RPS8P62241 208 aaKnown RBP14.76□□□□□ -0.05
RFX1-204ENST00000588885 GPSM2P81274 684 aa14.76□□□□□ -0.05
RFX1-204ENST00000588885 GPC2Q8N158 579 aa14.76□□□□□ -0.05
RFX1-204ENST00000588885 L3MBTL3Q96JM7 780 aaPredicted RBP14.76□□□□□ -0.05
RFX1-204ENST00000588885 RTFDC1Q9BY42 306 aaPredicted RBP14.76□□□□□ -0.05
RFX1-204ENST00000588885 HACL1Q9UJ83 578 aa14.76□□□□□ -0.05
RFX1-204ENST00000588885 CLEC11AQ9Y240 323 aa14.76□□□□□ -0.05
RFX1-204ENST00000588885 COL4A5P29400 1685 aa14.75□□□□□ -0.05
RFX1-204ENST00000588885 C6orf229H3BNL8 230 aa14.75□□□□□ -0.05
RFX1-204ENST00000588885 RIMBP2O15034 1052 aa14.75□□□□□ -0.05
RFX1-204ENST00000588885 HSP90B1P14625 803 aaKnown RBP14.75□□□□□ -0.05
RFX1-204ENST00000588885 CCDC152Q4G0S7 254 aa14.75□□□□□ -0.05
RFX1-204ENST00000588885 CHADLQ6NUI6 762 aa14.75□□□□□ -0.05
RFX1-204ENST00000588885 DNAJC5GQ8N7S2 189 aa14.75□□□□□ -0.05
RFX1-204ENST00000588885 GPR101Q96P66 508 aaPredicted RBP14.75□□□□□ -0.05
RFX1-204ENST00000588885 F6X3S4 739 aa14.74□□□□□ -0.05
RFX1-204ENST00000588885 EPHX2P34913 555 aa14.74□□□□□ -0.05
RFX1-204ENST00000588885 UBE3BQ7Z3V4 1068 aa14.74□□□□□ -0.05
RFX1-204ENST00000588885 TMC4Q7Z404 712 aa14.74□□□□□ -0.05
RFX1-204ENST00000588885 DNAAF4Q8WXU2 420 aa14.74□□□□□ -0.05
RFX1-204ENST00000588885 POLLQ9UGP5 575 aa14.74□□□□□ -0.05
RFX1-204ENST00000588885 ZNRF3Q9ULT6 936 aa14.74□□□□□ -0.05
RFX1-204ENST00000588885 LAMB2P55268 1798 aa14.74□□□□□ -0.05
RFX1-204ENST00000588885 RAD17O75943 681 aa14.73□□□□□ -0.05
RFX1-204ENST00000588885 EPS15P42566 896 aa14.73□□□□□ -0.05
RFX1-204ENST00000588885 CXCL9Q07325 125 aa14.73□□□□□ -0.05
RFX1-204ENST00000588885 KIAA2012Q0VF49 1180 aa14.73□□□□□ -0.05
RFX1-204ENST00000588885 GCKRQ14397 625 aa14.73□□□□□ -0.05
RFX1-204ENST00000588885 ZNF521Q96K83 1311 aa14.72□□□□□ -0.05
RFX1-204ENST00000588885 H7C1W4 665 aa14.72□□□□□ -0.05
RFX1-204ENST00000588885 LMOD1P29536 600 aaPredicted RBP14.72□□□□□ -0.05
RFX1-204ENST00000588885 CTSWP56202 376 aa14.72□□□□□ -0.05
RFX1-204ENST00000588885 DOK7Q18PE1 504 aa14.72□□□□□ -0.05
RFX1-204ENST00000588885 WASHC4Q2M389 1173 aa14.72□□□□□ -0.05
RFX1-204ENST00000588885 LDHDQ86WU2 507 aa14.72□□□□□ -0.05
RFX1-204ENST00000588885 VPS33BQ9H267 617 aa14.72□□□□□ -0.05
RFX1-204ENST00000588885 ANKIB1Q9P2G1 1089 aa14.72□□□□□ -0.05
RFX1-204ENST00000588885 CDHR2Q9BYE9 1310 aa14.71□□□□□ -0.05
RFX1-204ENST00000588885 SCNN1DP51172 638 aa14.71□□□□□ -0.05
RFX1-204ENST00000588885 ANKRD18AQ8IVF6 992 aa14.71□□□□□ -0.05
RFX1-204ENST00000588885 TTLL11Q8NHH1 800 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms