RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 STYK1Q6J9G0 422 aa23.89■■□□□ 1.41
CLPTM1-209ENST00000588855 COL4A1P02462 1669 aa23.88■■□□□ 1.41
CLPTM1-209ENST00000588855 PDE3AQ14432 1141 aa23.88■■□□□ 1.41
CLPTM1-209ENST00000588855 EPHA10Q5JZY3 1008 aa23.88■■□□□ 1.41
CLPTM1-209ENST00000588855 KAZALD1Q96I82 304 aa23.88■■□□□ 1.41
CLPTM1-209ENST00000588855 CCDC85AQ96PX6 553 aaPredicted RBP23.88■■□□□ 1.41
CLPTM1-209ENST00000588855 PIM2Q9P1W9 311 aa23.88■■□□□ 1.41
CLPTM1-209ENST00000588855 ARFGEF1Q9Y6D6 1849 aa23.87■■□□□ 1.41
CLPTM1-209ENST00000588855 UBTFL1P0CB47 393 aaPredicted RBP23.87■■□□□ 1.41
CLPTM1-209ENST00000588855 FOXO4P98177 505 aa23.87■■□□□ 1.41
CLPTM1-209ENST00000588855 TTLL11Q8NHH1 800 aa23.87■■□□□ 1.41
CLPTM1-209ENST00000588855 COG6Q9Y2V7 657 aa23.87■■□□□ 1.41
CLPTM1-209ENST00000588855 HOXA10P31260 410 aaPredicted RBP23.86■■□□□ 1.41
CLPTM1-209ENST00000588855 SPEF2Q9C093 1822 aa23.85■■□□□ 1.41
CLPTM1-209ENST00000588855 MVPQ14764 893 aaKnown RBP23.85■■□□□ 1.41
CLPTM1-209ENST00000588855 CCDC152Q4G0S7 254 aa23.85■■□□□ 1.41
CLPTM1-209ENST00000588855 RBM17Q96I25 401 aaKnown RBP23.85■■□□□ 1.41
CLPTM1-209ENST00000588855 SUPT16HQ9Y5B9 1047 aaKnown RBP23.85■■□□□ 1.41
CLPTM1-209ENST00000588855 DDX46Q7L014 1031 aaKnown RBP23.84■■□□□ 1.41
CLPTM1-209ENST00000588855 TTLL6Q8N841 843 aa23.84■■□□□ 1.41
CLPTM1-209ENST00000588855 CNKSR1Q969H4 720 aa23.84■■□□□ 1.41
CLPTM1-209ENST00000588855 BICC1Q9H694 974 aaKnown RBP23.84■■□□□ 1.41
CLPTM1-209ENST00000588855 CSF1RP07333 972 aa23.84■■□□□ 1.41
CLPTM1-209ENST00000588855 GNAI3P08754 354 aa23.84■■□□□ 1.41
CLPTM1-209ENST00000588855 DALRD3Q5D0E6 543 aaKnown RBP23.84■■□□□ 1.41
CLPTM1-209ENST00000588855 CRAMP1Q96RY5 1269 aa23.84■■□□□ 1.41
CLPTM1-209ENST00000588855 GREM2Q9H772 168 aa23.84■■□□□ 1.41
CLPTM1-209ENST00000588855 SEC31BQ9NQW1 1179 aa23.84■■□□□ 1.41
CLPTM1-209ENST00000588855 BCS1LQ9Y276 419 aa23.84■■□□□ 1.41
CLPTM1-209ENST00000588855 UTRNP46939 3433 aa23.83■■□□□ 1.41
CLPTM1-209ENST00000588855 FAM161AQ3B820 660 aa23.83■■□□□ 1.41
CLPTM1-209ENST00000588855 PRPF40BQ6NWY9 871 aaKnown RBP23.83■■□□□ 1.41
CLPTM1-209ENST00000588855 LMBR1LQ6UX01 489 aa23.83■■□□□ 1.41
CLPTM1-209ENST00000588855 PELP1Q8IZL8 1130 aaKnown RBP23.83■■□□□ 1.41
CLPTM1-209ENST00000588855 ANKRD44Q8N8A2 993 aa23.83■■□□□ 1.41
CLPTM1-209ENST00000588855 LRRFIP2Q9Y608 721 aaKnown RBP23.83■■□□□ 1.41
CLPTM1-209ENST00000588855 RTL9Q8NET4 1388 aa23.82■■□□□ 1.4
CLPTM1-209ENST00000588855 ZBTB7BO15156 539 aaPredicted RBP23.82■■□□□ 1.4
CLPTM1-209ENST00000588855 YBX3P16989 372 aaKnown RBP eCLIP23.81■■□□□ 1.42e-8■□□□□ 11.2
CLPTM1-209ENST00000588855 ALDH1B1P30837 517 aa23.81■■□□□ 1.4
CLPTM1-209ENST00000588855 GRAPQ13588 217 aa23.81■■□□□ 1.4
CLPTM1-209ENST00000588855 RABL6Q3YEC7 729 aaPredicted RBP23.81■■□□□ 1.4
CLPTM1-209ENST00000588855 GRAPLQ8TC17 118 aaPredicted RBP23.81■■□□□ 1.4
CLPTM1-209ENST00000588855 CELF1Q92879 486 aaKnown RBP23.81■■□□□ 1.4
CLPTM1-209ENST00000588855 DDX19BQ9UMR2 479 aa23.81■■□□□ 1.4
CLPTM1-209ENST00000588855 CHMP3Q9Y3E7 222 aa23.81■■□□□ 1.4
CLPTM1-209ENST00000588855 SLC51AQ86UW1 340 aa23.79■■□□□ 1.4
CLPTM1-209ENST00000588855 ZNF219Q9P2Y4 722 aaPredicted RBP23.79■■□□□ 1.4
CLPTM1-209ENST00000588855 ITGA6P23229 1130 aa23.79■■□□□ 1.4
CLPTM1-209ENST00000588855 LRRC37AA6NMS7 1700 aa23.79■■□□□ 1.4
CLPTM1-209ENST00000588855 PPEF1O14829 653 aaPredicted RBP23.78■■□□□ 1.4
CLPTM1-209ENST00000588855 GNAI2P04899 355 aa23.78■■□□□ 1.4
CLPTM1-209ENST00000588855 GPR162Q16538 588 aa23.78■■□□□ 1.4
CLPTM1-209ENST00000588855 C1orf115Q9H7X2 142 aa23.78■■□□□ 1.4
CLPTM1-209ENST00000588855 HDAC5Q9UQL6 1122 aa23.78■■□□□ 1.4
CLPTM1-209ENST00000588855 C21orf2O43822 256 aa23.76■■□□□ 1.39
CLPTM1-209ENST00000588855 OLFM4Q6UX06 510 aa23.76■■□□□ 1.39
CLPTM1-209ENST00000588855 CDC5LQ99459 802 aaKnown RBP23.76■■□□□ 1.39
CLPTM1-209ENST00000588855 ANKRD18BA2A2Z9 1011 aa23.75■■□□□ 1.39
CLPTM1-209ENST00000588855 RPS8P62241 208 aaKnown RBP23.75■■□□□ 1.39
CLPTM1-209ENST00000588855 IFIT5Q13325 482 aaKnown RBP23.75■■□□□ 1.39
CLPTM1-209ENST00000588855 C7orf43Q8WVR3 580 aa23.75■■□□□ 1.39
CLPTM1-209ENST00000588855 BBOX1O75936 387 aa23.74■■□□□ 1.39
CLPTM1-209ENST00000588855 CCDC57Q2TAC2 916 aa23.74■■□□□ 1.39
CLPTM1-209ENST00000588855 ANKRD18AQ8IVF6 992 aa23.74■■□□□ 1.39
CLPTM1-209ENST00000588855 CRBNQ96SW2 442 aa23.74■■□□□ 1.39
CLPTM1-209ENST00000588855 FER1L6Q2WGJ9 1857 aa23.74■■□□□ 1.39
CLPTM1-209ENST00000588855 CENPBP07199 599 aaPredicted RBP23.74■■□□□ 1.39
CLPTM1-209ENST00000588855 ZBTB40Q9NUA8 1239 aa23.74■■□□□ 1.39
CLPTM1-209ENST00000588855 ATP6V0A2Q9Y487 856 aa23.73■■□□□ 1.39
CLPTM1-209ENST00000588855 A0A1B0GUL6 1792 aa23.72■■□□□ 1.39
CLPTM1-209ENST00000588855 SNED1Q8TER0 1413 aa23.72■■□□□ 1.39
CLPTM1-209ENST00000588855 ZNF594Q96JF6 807 aaPredicted RBP23.72■■□□□ 1.39
CLPTM1-209ENST00000588855 IGHMBP2P38935 993 aaKnown RBP23.71■■□□□ 1.39
CLPTM1-209ENST00000588855 MTX1Q13505 466 aa23.71■■□□□ 1.39
CLPTM1-209ENST00000588855 TMC4Q7Z404 712 aa23.71■■□□□ 1.39
CLPTM1-209ENST00000588855 CHMP4BQ9H444 224 aaKnown RBP23.71■■□□□ 1.39
CLPTM1-209ENST00000588855 RFX5P48382 616 aaPredicted RBP23.7■■□□□ 1.38
CLPTM1-209ENST00000588855 CCDC93Q567U6 631 aa23.7■■□□□ 1.38
CLPTM1-209ENST00000588855 TAF7LQ5H9L4 462 aa23.7■■□□□ 1.38
CLPTM1-209ENST00000588855 LTBP1Q14766 1721 aa23.7■■□□□ 1.38
CLPTM1-209ENST00000588855 SP8Q8IXZ3 490 aa23.69■■□□□ 1.38
CLPTM1-209ENST00000588855 KLHDC4Q8TBB5 520 aa23.69■■□□□ 1.38
CLPTM1-209ENST00000588855 PNMA6EA0A0J9YXQ4 647 aa23.69■■□□□ 1.38
CLPTM1-209ENST00000588855 SRGAP3O43295 1099 aa23.69■■□□□ 1.38
CLPTM1-209ENST00000588855 SOGA3Q5TF21 947 aa23.69■■□□□ 1.38
CLPTM1-209ENST00000588855 MPHOSPH8Q99549 860 aa23.69■■□□□ 1.38
CLPTM1-209ENST00000588855 BSDC1Q9NW68 430 aaPredicted RBP23.69■■□□□ 1.38
CLPTM1-209ENST00000588855 GRIN3BO60391 1043 aa23.68■■□□□ 1.38
CLPTM1-209ENST00000588855 IRX6P78412 446 aaPredicted RBP23.68■■□□□ 1.38
CLPTM1-209ENST00000588855 CEP85Q6P2H3 762 aa23.68■■□□□ 1.38
CLPTM1-209ENST00000588855 ARHGAP27Q6ZUM4 889 aa23.68■■□□□ 1.38
CLPTM1-209ENST00000588855 DUOX1Q9NRD9 1551 aa23.68■■□□□ 1.38
CLPTM1-209ENST00000588855 DCAF8L1A6NGE4 600 aa23.67■■□□□ 1.38
CLPTM1-209ENST00000588855 PTPN12Q05209 780 aaKnown RBP23.67■■□□□ 1.38
CLPTM1-209ENST00000588855 CC2D2BQ6DHV5 1058 aa23.67■■□□□ 1.38
CLPTM1-209ENST00000588855 CCDC88AQ3V6T2 1871 aa23.66■■□□□ 1.38
CLPTM1-209ENST00000588855 NFKBIEO00221 500 aa23.66■■□□□ 1.38
CLPTM1-209ENST00000588855 LDHAL6AQ6ZMR3 332 aa23.66■■□□□ 1.38
CLPTM1-209ENST00000588855 TMX4Q9H1E5 349 aaPredicted RBP23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms