RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 CCDC57Q2TAC2 916 aa32.08■■■□□ 2.73
SCAMP4-210ENST00000588555 CCDC85AQ96PX6 553 aaPredicted RBP32.07■■■□□ 2.72
SCAMP4-210ENST00000588555 CAMKK2Q96RR4 588 aa32.07■■■□□ 2.72
SCAMP4-210ENST00000588555 GREM2Q9H772 168 aa32.07■■■□□ 2.72
SCAMP4-210ENST00000588555 MX1P20591 662 aa32.07■■■□□ 2.72
SCAMP4-210ENST00000588555 ATG9AQ7Z3C6 839 aa32.07■■■□□ 2.72
SCAMP4-210ENST00000588555 ZNF594Q96JF6 807 aaPredicted RBP32.07■■■□□ 2.72
SCAMP4-210ENST00000588555 STAP2Q9UGK3 403 aa32.07■■■□□ 2.72
SCAMP4-210ENST00000588555 GYS1P13807 737 aa32.06■■■□□ 2.72
SCAMP4-210ENST00000588555 GSPT1P15170 499 aaKnown RBP32.06■■■□□ 2.72
SCAMP4-210ENST00000588555 TTC22Q5TAA0 569 aa32.06■■■□□ 2.72
SCAMP4-210ENST00000588555 CLASRPQ8N2M8 674 aaKnown RBP32.06■■■□□ 2.72
SCAMP4-210ENST00000588555 HSP90B1P14625 803 aaKnown RBP32.05■■■□□ 2.72
SCAMP4-210ENST00000588555 IFIT5Q13325 482 aaKnown RBP32.05■■■□□ 2.72
SCAMP4-210ENST00000588555 ERFEQ4G0M1 354 aa32.04■■■□□ 2.72
SCAMP4-210ENST00000588555 TFCP2L1Q9NZI6 479 aa32.04■■■□□ 2.72
SCAMP4-210ENST00000588555 ITGA6P23229 1130 aa32.04■■■□□ 2.72
SCAMP4-210ENST00000588555 NYXQ9GZU5 481 aa32.04■■■□□ 2.72
SCAMP4-210ENST00000588555 EYA2O00167 538 aa32.03■■■□□ 2.72
SCAMP4-210ENST00000588555 CIAO1O76071 339 aa32.03■■■□□ 2.72
SCAMP4-210ENST00000588555 EN1Q05925 392 aaPredicted RBP32.03■■■□□ 2.72
SCAMP4-210ENST00000588555 NFIXQ14938 502 aa32.03■■■□□ 2.72
SCAMP4-210ENST00000588555 EZH2Q15910 746 aaKnown RBP32.03■■■□□ 2.72
SCAMP4-210ENST00000588555 FBXO3Q9UK99 471 aa32.02■■■□□ 2.72
SCAMP4-210ENST00000588555 CARMIL3Q8ND23 1372 aa32.02■■■□□ 2.72
SCAMP4-210ENST00000588555 ABCC12Q96J65 1359 aa32.02■■■□□ 2.72
SCAMP4-210ENST00000588555 CASZ1Q86V15 1759 aa32.02■■■□□ 2.72
SCAMP4-210ENST00000588555 LRRC24Q50LG9 513 aa32.02■■■□□ 2.72
SCAMP4-210ENST00000588555 SLC10A5Q5PT55 438 aa32.02■■■□□ 2.72
SCAMP4-210ENST00000588555 EAF2Q96CJ1 260 aaPredicted RBP32.02■■■□□ 2.72
SCAMP4-210ENST00000588555 LRP5O75197 1615 aa32.01■■■□□ 2.72
SCAMP4-210ENST00000588555 RTL9Q8NET4 1388 aa32.01■■■□□ 2.72
SCAMP4-210ENST00000588555 AOX1Q06278 1338 aa32.01■■■□□ 2.71
SCAMP4-210ENST00000588555 IL15P40933 162 aaPredicted RBP32.01■■■□□ 2.71
SCAMP4-210ENST00000588555 TFCP2Q12800 502 aa32.01■■■□□ 2.71
SCAMP4-210ENST00000588555 TSHZ3Q63HK5 1081 aa32.01■■■□□ 2.71
SCAMP4-210ENST00000588555 NBPF5PQ86XG9 351 aaPredicted RBP32.01■■■□□ 2.71
SCAMP4-210ENST00000588555 PUS3Q9BZE2 481 aaKnown RBP32.01■■■□□ 2.71
SCAMP4-210ENST00000588555 ANKRD18BA2A2Z9 1011 aa31.99■■■□□ 2.71
SCAMP4-210ENST00000588555 AACSQ86V21 672 aa31.99■■■□□ 2.71
SCAMP4-210ENST00000588555 TPTE2Q6XPS3 522 aa31.98■■■□□ 2.71
SCAMP4-210ENST00000588555 COL23A1Q86Y22 540 aaPredicted RBP31.98■■■□□ 2.71
SCAMP4-210ENST00000588555 CCDC152Q4G0S7 254 aa31.97■■■□□ 2.71
SCAMP4-210ENST00000588555 RBM19Q9Y4C8 960 aaKnown RBP31.97■■■□□ 2.71
SCAMP4-210ENST00000588555 TM4SF1P30408 202 aa31.96■■■□□ 2.71
SCAMP4-210ENST00000588555 TAF7LQ5H9L4 462 aa31.96■■■□□ 2.71
SCAMP4-210ENST00000588555 C3orf67Q6ZVT6 689 aa31.96■■■□□ 2.71
SCAMP4-210ENST00000588555 FLAD1Q8NFF5 587 aa31.96■■■□□ 2.71
SCAMP4-210ENST00000588555 IFIT2P09913 472 aaKnown RBP31.96■■■□□ 2.71
SCAMP4-210ENST00000588555 GTF2E1P29083 439 aaPredicted RBP31.96■■■□□ 2.71
SCAMP4-210ENST00000588555 SF3B3Q15393 1217 aaKnown RBP31.96■■■□□ 2.71
SCAMP4-210ENST00000588555 TNNI3KQ59H18 835 aa31.96■■■□□ 2.71
SCAMP4-210ENST00000588555 PI4K2BQ8TCG2 481 aa31.96■■■□□ 2.71
SCAMP4-210ENST00000588555 FPGT-TNNI3KV9GXZ4 949 aa31.96■■■□□ 2.71
SCAMP4-210ENST00000588555 ANO8Q9HCE9 1232 aaPredicted RBP31.95■■■□□ 2.71
SCAMP4-210ENST00000588555 TTC41PQ6P2S7 1318 aa31.95■■■□□ 2.7
SCAMP4-210ENST00000588555 PNPLA7Q6ZV29 1317 aa31.95■■■□□ 2.7
SCAMP4-210ENST00000588555 GPR108Q9NPR9 543 aa31.94■■■□□ 2.7
SCAMP4-210ENST00000588555 RIPOR2Q9Y4F9 1068 aa31.94■■■□□ 2.7
SCAMP4-210ENST00000588555 BAG6P46379 1132 aa31.94■■■□□ 2.7
SCAMP4-210ENST00000588555 SF3B2Q13435 895 aaKnown RBP31.94■■■□□ 2.7
SCAMP4-210ENST00000588555 CCDC8Q9H0W5 538 aaPredicted RBP31.94■■■□□ 2.7
SCAMP4-210ENST00000588555 TLR7Q9NYK1 1049 aaKnown RBP31.94■■■□□ 2.7
SCAMP4-210ENST00000588555 RIC1Q4ADV7 1423 aa31.94■■■□□ 2.7
SCAMP4-210ENST00000588555 SDSP20132 328 aa31.93■■■□□ 2.7
SCAMP4-210ENST00000588555 SEC31BQ9NQW1 1179 aa31.93■■■□□ 2.7
SCAMP4-210ENST00000588555 LDHAL6AQ6ZMR3 332 aa31.92■■■□□ 2.7
SCAMP4-210ENST00000588555 TNRC6CQ9HCJ0 1690 aaKnown RBP31.92■■■□□ 2.7
SCAMP4-210ENST00000588555 ECHDC1Q9NTX5 307 aa31.91■■■□□ 2.7
SCAMP4-210ENST00000588555 COL4A1P02462 1669 aa31.91■■■□□ 2.7
SCAMP4-210ENST00000588555 QSER1Q2KHR3 1735 aa31.91■■■□□ 2.7
SCAMP4-210ENST00000588555 DEFB132Q7Z7B7 95 aa31.91■■■□□ 2.7
SCAMP4-210ENST00000588555 ZNF609O15014 1411 aa31.9■■■□□ 2.7
SCAMP4-210ENST00000588555 SEC24BO95487 1268 aa31.9■■■□□ 2.7
SCAMP4-210ENST00000588555 SLC15A2Q16348 729 aa31.9■■■□□ 2.7
SCAMP4-210ENST00000588555 DBNLQ9UJU6 430 aaKnown RBP31.9■■■□□ 2.7
SCAMP4-210ENST00000588555 DDR1Q08345 913 aa31.89■■■□□ 2.7
SCAMP4-210ENST00000588555 CCDC24Q8N4L8 307 aa31.89■■■□□ 2.7
SCAMP4-210ENST00000588555 CNBD1Q8NA66 436 aa31.89■■■□□ 2.7
SCAMP4-210ENST00000588555 GPATCH3Q96I76 525 aa31.89■■■□□ 2.69
SCAMP4-210ENST00000588555 CEP126Q9P2H0 1117 aa31.89■■■□□ 2.69
SCAMP4-210ENST00000588555 PRR5LQ6MZQ0 368 aa31.88■■■□□ 2.69
SCAMP4-210ENST00000588555 NLRP3Q96P20 1036 aa31.88■■■□□ 2.69
SCAMP4-210ENST00000588555 POLRMTO00411 1230 aaKnown RBP31.87■■■□□ 2.69
SCAMP4-210ENST00000588555 SERPINB2P05120 415 aa31.87■■■□□ 2.69
SCAMP4-210ENST00000588555 CNNM1Q9NRU3 951 aa31.87■■■□□ 2.69
SCAMP4-210ENST00000588555 SPEF2Q9C093 1822 aa31.87■■■□□ 2.69
SCAMP4-210ENST00000588555 GLRX3O76003 335 aaKnown RBP31.86■■■□□ 2.69
SCAMP4-210ENST00000588555 NLGN1Q8N2Q7 840 aa31.86■■■□□ 2.69
SCAMP4-210ENST00000588555 VGLL2Q8N8G2 317 aa31.86■■■□□ 2.69
SCAMP4-210ENST00000588555 ERC2O15083 957 aa31.86■■■□□ 2.69
SCAMP4-210ENST00000588555 MSH5O43196 834 aa31.86■■■□□ 2.69
SCAMP4-210ENST00000588555 CDC45O75419 566 aa31.86■■■□□ 2.69
SCAMP4-210ENST00000588555 TBC1D9Q6ZT07 1266 aa31.86■■■□□ 2.69
SCAMP4-210ENST00000588555 STK32BQ9NY57 414 aa31.86■■■□□ 2.69
SCAMP4-210ENST00000588555 DBNDD2Q9BQY9 259 aa31.85■■■□□ 2.69
SCAMP4-210ENST00000588555 TAF1P21675 1872 aa31.84■■■□□ 2.69
SCAMP4-210ENST00000588555 NPHP1O15259 732 aa31.84■■■□□ 2.69
SCAMP4-210ENST00000588555 METTL24Q5JXM2 366 aa31.84■■■□□ 2.69
SCAMP4-210ENST00000588555 CDC5LQ99459 802 aaKnown RBP31.84■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms