RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 ARHGAP45Q92619 1136 aa25.6■■□□□ 1.69
DDX39A-207ENST00000588542 PLA2G12BQ9BX93 195 aa25.6■■□□□ 1.69
DDX39A-207ENST00000588542 LRRC37AA6NMS7 1700 aa25.6■■□□□ 1.69
DDX39A-207ENST00000588542 DICER1Q9UPY3 1922 aaKnown RBP25.59■■□□□ 1.69
DDX39A-207ENST00000588542 GRM8O00222 908 aa25.59■■□□□ 1.69
DDX39A-207ENST00000588542 CTSWP56202 376 aa25.59■■□□□ 1.69
DDX39A-207ENST00000588542 GRAPQ13588 217 aa25.59■■□□□ 1.69
DDX39A-207ENST00000588542 GRAPLQ8TC17 118 aaPredicted RBP25.59■■□□□ 1.69
DDX39A-207ENST00000588542 API5Q9BZZ5 524 aaKnown RBP25.59■■□□□ 1.69
DDX39A-207ENST00000588542 SPEF2Q9C093 1822 aa25.58■■□□□ 1.69
DDX39A-207ENST00000588542 PPEF1O14829 653 aaPredicted RBP25.58■■□□□ 1.69
DDX39A-207ENST00000588542 PRELPP51888 382 aa25.58■■□□□ 1.69
DDX39A-207ENST00000588542 SOGA3Q5TF21 947 aa25.58■■□□□ 1.69
DDX39A-207ENST00000588542 YY1P25490 414 aa25.57■■□□□ 1.68
DDX39A-207ENST00000588542 CCDC152Q4G0S7 254 aa25.57■■□□□ 1.68
DDX39A-207ENST00000588542 CCDC93Q567U6 631 aa25.57■■□□□ 1.68
DDX39A-207ENST00000588542 TTLL11Q8NHH1 800 aa25.57■■□□□ 1.68
DDX39A-207ENST00000588542 CELF1Q92879 486 aaKnown RBP25.57■■□□□ 1.68
DDX39A-207ENST00000588542 YTHDC1Q96MU7 727 aaKnown RBP25.57■■□□□ 1.68
DDX39A-207ENST00000588542 SEC31BQ9NQW1 1179 aa25.57■■□□□ 1.68
DDX39A-207ENST00000588542 UTYO14607 1347 aa25.57■■□□□ 1.68
DDX39A-207ENST00000588542 BBOX1O75936 387 aa25.56■■□□□ 1.68
DDX39A-207ENST00000588542 CCDC85AQ96PX6 553 aaPredicted RBP25.56■■□□□ 1.68
DDX39A-207ENST00000588542 C9orf78Q9NZ63 289 aaPredicted RBP25.56■■□□□ 1.68
DDX39A-207ENST00000588542 TNNQ9UQP3 1299 aa25.56■■□□□ 1.68
DDX39A-207ENST00000588542 FRAT1Q92837 279 aaPredicted RBP25.55■■□□□ 1.68
DDX39A-207ENST00000588542 ATP6V0A2Q9Y487 856 aa25.55■■□□□ 1.68
DDX39A-207ENST00000588542 LTBP3Q9NS15 1303 aa25.55■■□□□ 1.68
DDX39A-207ENST00000588542 IPO8O15397 1037 aaKnown RBP25.54■■□□□ 1.68
DDX39A-207ENST00000588542 CSF1RP07333 972 aa25.54■■□□□ 1.68
DDX39A-207ENST00000588542 NBPF7P0C2Y1 421 aaPredicted RBP25.54■■□□□ 1.68
DDX39A-207ENST00000588542 TRIM27P14373 513 aa25.54■■□□□ 1.68
DDX39A-207ENST00000588542 FOXO4P98177 505 aa25.54■■□□□ 1.68
DDX39A-207ENST00000588542 RTL9Q8NET4 1388 aa25.54■■□□□ 1.68
DDX39A-207ENST00000588542 CCT4P50991 539 aaKnown RBP25.53■■□□□ 1.68
DDX39A-207ENST00000588542 EPHA10Q5JZY3 1008 aa25.53■■□□□ 1.68
DDX39A-207ENST00000588542 CC2D2BQ6DHV5 1058 aa25.53■■□□□ 1.68
DDX39A-207ENST00000588542 ATF7IPQ6VMQ6 1270 aa25.53■■□□□ 1.68
DDX39A-207ENST00000588542 USP44Q9H0E7 712 aa25.53■■□□□ 1.68
DDX39A-207ENST00000588542 GREM2Q9H772 168 aa25.53■■□□□ 1.68
DDX39A-207ENST00000588542 TIAM2Q8IVF5 1701 aa25.53■■□□□ 1.68
DDX39A-207ENST00000588542 C9orf131Q5VYM1 1079 aa25.52■■□□□ 1.68
DDX39A-207ENST00000588542 SP8Q8IXZ3 490 aa25.52■■□□□ 1.68
DDX39A-207ENST00000588542 RTKN2Q8IZC4 609 aa25.52■■□□□ 1.68
DDX39A-207ENST00000588542 KAZALD1Q96I82 304 aa25.52■■□□□ 1.68
DDX39A-207ENST00000588542 TAOK3Q9H2K8 898 aa25.52■■□□□ 1.68
DDX39A-207ENST00000588542 LMNB1P20700 586 aa25.51■■□□□ 1.67
DDX39A-207ENST00000588542 RPS8P62241 208 aaKnown RBP25.51■■□□□ 1.67
DDX39A-207ENST00000588542 FKBP4Q02790 459 aaKnown RBP eCLIP25.51■■□□□ 1.67
DDX39A-207ENST00000588542 SUCLG2Q96I99 432 aa25.51■■□□□ 1.67
DDX39A-207ENST00000588542 LTBP1Q14766 1721 aa25.51■■□□□ 1.67
DDX39A-207ENST00000588542 ZKSCAN2Q63HK3 967 aa25.5■■□□□ 1.67
DDX39A-207ENST00000588542 INTS3Q68E01 1043 aaKnown RBP25.5■■□□□ 1.67
DDX39A-207ENST00000588542 TMC4Q7Z404 712 aa25.5■■□□□ 1.67
DDX39A-207ENST00000588542 RNF181Q9P0P0 153 aa25.5■■□□□ 1.67
DDX39A-207ENST00000588542 PSMD1Q99460 953 aa25.49■■□□□ 1.67
DDX39A-207ENST00000588542 FAM161AQ3B820 660 aa25.48■■□□□ 1.67
DDX39A-207ENST00000588542 GRIPAP1Q4V328 841 aa25.48■■□□□ 1.67
DDX39A-207ENST00000588542 DUOX1Q9NRD9 1551 aa25.48■■□□□ 1.67
DDX39A-207ENST00000588542 LMBR1LQ6UX01 489 aa25.47■■□□□ 1.67
DDX39A-207ENST00000588542 CLUAP1Q96AJ1 413 aa25.47■■□□□ 1.67
DDX39A-207ENST00000588542 RCAN3Q9UKA8 241 aa25.47■■□□□ 1.67
DDX39A-207ENST00000588542 ITGA6P23229 1130 aa25.46■■□□□ 1.67
DDX39A-207ENST00000588542 ANKRD18AQ8IVF6 992 aa25.46■■□□□ 1.67
DDX39A-207ENST00000588542 CDC5LQ99459 802 aaKnown RBP25.46■■□□□ 1.67
DDX39A-207ENST00000588542 ZNF277Q9NRM2 450 aaPredicted RBP25.46■■□□□ 1.67
DDX39A-207ENST00000588542 TMX4Q9H1E5 349 aaPredicted RBP25.45■■□□□ 1.66
DDX39A-207ENST00000588542 A0A1B0GUL6 1792 aa25.44■■□□□ 1.66
DDX39A-207ENST00000588542 MPNDQ8N594 471 aa25.44■■□□□ 1.66
DDX39A-207ENST00000588542 RTFDC1Q9BY42 306 aaPredicted RBP25.44■■□□□ 1.66
DDX39A-207ENST00000588542 BICC1Q9H694 974 aaKnown RBP25.44■■□□□ 1.66
DDX39A-207ENST00000588542 COL4A5P29400 1685 aa25.43■■□□□ 1.66
DDX39A-207ENST00000588542 RABL6Q3YEC7 729 aaPredicted RBP25.43■■□□□ 1.66
DDX39A-207ENST00000588542 TMEM57Q8N5G2 664 aa25.43■■□□□ 1.66
DDX39A-207ENST00000588542 ANKRD44Q8N8A2 993 aa25.43■■□□□ 1.66
DDX39A-207ENST00000588542 RLBP1P12271 317 aa25.42■■□□□ 1.66
DDX39A-207ENST00000588542 GPSM2P81274 684 aa25.42■■□□□ 1.66
DDX39A-207ENST00000588542 DPP8Q6V1X1 898 aaPredicted RBP25.42■■□□□ 1.66
DDX39A-207ENST00000588542 MEIS3Q99687 375 aa25.42■■□□□ 1.66
DDX39A-207ENST00000588542 BSDC1Q9NW68 430 aaPredicted RBP25.42■■□□□ 1.66
DDX39A-207ENST00000588542 CHMP3Q9Y3E7 222 aa25.42■■□□□ 1.66
DDX39A-207ENST00000588542 ANKRD18BA2A2Z9 1011 aa25.41■■□□□ 1.66
DDX39A-207ENST00000588542 IARSP41252 1262 aaKnown RBP25.41■■□□□ 1.66
DDX39A-207ENST00000588542 DZIP1LQ8IYY4 767 aaKnown RBP25.41■■□□□ 1.66
DDX39A-207ENST00000588542 ZNF784Q8NCA9 323 aaPredicted RBP25.41■■□□□ 1.66
DDX39A-207ENST00000588542 UBTFL1P0CB47 393 aaPredicted RBP25.4■■□□□ 1.66
DDX39A-207ENST00000588542 IFIT5Q13325 482 aaKnown RBP25.4■■□□□ 1.66
DDX39A-207ENST00000588542 ZC3H4Q9UPT8 1303 aaKnown RBP25.39■■□□□ 1.66
DDX39A-207ENST00000588542 IGHMBP2P38935 993 aaKnown RBP25.39■■□□□ 1.66
DDX39A-207ENST00000588542 PODXL2Q9NZ53 605 aa25.39■■□□□ 1.66
DDX39A-207ENST00000588542 NSFL1CQ9UNZ2 370 aaKnown RBP25.39■■□□□ 1.66
DDX39A-207ENST00000588542 CCDC57Q2TAC2 916 aa25.38■■□□□ 1.65
DDX39A-207ENST00000588542 SUPT20HQ8NEM7 779 aa25.38■■□□□ 1.65
DDX39A-207ENST00000588542 POLLQ9UGP5 575 aa25.38■■□□□ 1.65
DDX39A-207ENST00000588542 MINPP1Q9UNW1 487 aa25.38■■□□□ 1.65
DDX39A-207ENST00000588542 FTSJ3Q8IY81 847 aaKnown RBP25.37■■□□□ 1.65
DDX39A-207ENST00000588542 ZNF594Q96JF6 807 aaPredicted RBP25.37■■□□□ 1.65
DDX39A-207ENST00000588542 VPS33BQ9H267 617 aa25.37■■□□□ 1.65
DDX39A-207ENST00000588542 PLIN1O60240 522 aa25.36■■□□□ 1.65
DDX39A-207ENST00000588542 GNAI3P08754 354 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 307.2 ms