RNA–Protein interactions for RNA: ENST00000588468.1

CNN1-207, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-207ENST00000588468 SPINK5Q9NQ38 1064 aaPredicted RBP12.74□□□□□ -0.37
CNN1-207ENST00000588468 ZNF277Q9NRM2 450 aaPredicted RBP12.74□□□□□ -0.37
CNN1-207ENST00000588468 COL4A5P29400 1685 aa12.73□□□□□ -0.37
CNN1-207ENST00000588468 VEGFAP15692 232 aaPredicted RBP12.73□□□□□ -0.37
CNN1-207ENST00000588468 SUPT20HQ8NEM7 779 aa12.73□□□□□ -0.37
CNN1-207ENST00000588468 E9PSI1 815 aa12.72□□□□□ -0.37
CNN1-207ENST00000588468 FKBP5Q13451 457 aaPredicted RBP12.72□□□□□ -0.37
CNN1-207ENST00000588468 G2E3Q7L622 706 aa12.72□□□□□ -0.37
CNN1-207ENST00000588468 SP8Q8IXZ3 490 aa12.72□□□□□ -0.37
CNN1-207ENST00000588468 VPS33BQ9H267 617 aa12.72□□□□□ -0.37
CNN1-207ENST00000588468 COL4A1P02462 1669 aa12.72□□□□□ -0.37
CNN1-207ENST00000588468 NEURL1BA8MQ27 555 aa12.71□□□□□ -0.37
CNN1-207ENST00000588468 TCERG1O14776 1098 aaKnown RBP12.71□□□□□ -0.37
CNN1-207ENST00000588468 PDE8AO60658 829 aa12.71□□□□□ -0.37
CNN1-207ENST00000588468 IGKV5-2P06315 115 aa12.71□□□□□ -0.37
CNN1-207ENST00000588468 FSTL1Q12841 308 aa12.71□□□□□ -0.37
CNN1-207ENST00000588468 CCDC152Q4G0S7 254 aa12.71□□□□□ -0.37
CNN1-207ENST00000588468 DNAAF4Q8WXU2 420 aa12.71□□□□□ -0.37
CNN1-207ENST00000588468 JDP2Q8WYK2 163 aa12.71□□□□□ -0.37
CNN1-207ENST00000588468 L3MBTL3Q96JM7 780 aaPredicted RBP12.71□□□□□ -0.37
CNN1-207ENST00000588468 RTFDC1Q9BY42 306 aaPredicted RBP12.71□□□□□ -0.37
CNN1-207ENST00000588468 RRAGCQ9HB90 399 aa12.71□□□□□ -0.37
CNN1-207ENST00000588468 RTL9Q8NET4 1388 aa12.7□□□□□ -0.38
CNN1-207ENST00000588468 ZNF541Q9H0D2 1346 aa12.7□□□□□ -0.38
CNN1-207ENST00000588468 IQCA1LA6NCM1 817 aa12.7□□□□□ -0.38
CNN1-207ENST00000588468 FZD9O00144 591 aa12.7□□□□□ -0.38
CNN1-207ENST00000588468 HSPA6P17066 643 aa12.7□□□□□ -0.38
CNN1-207ENST00000588468 RTL5Q5HYW3 569 aaPredicted RBP12.7□□□□□ -0.38
CNN1-207ENST00000588468 DPP8Q6V1X1 898 aaPredicted RBP12.7□□□□□ -0.38
CNN1-207ENST00000588468 ZNF428Q96B54 188 aa12.7□□□□□ -0.38
CNN1-207ENST00000588468 ADAMTSL1Q8N6G6 1762 aa12.7□□□□□ -0.38
CNN1-207ENST00000588468 PSME4Q14997 1843 aa12.69□□□□□ -0.38
CNN1-207ENST00000588468 CTSWP56202 376 aa12.69□□□□□ -0.38
CNN1-207ENST00000588468 LARGE2Q8N3Y3 721 aa12.69□□□□□ -0.38
CNN1-207ENST00000588468 MPNDQ8N594 471 aa12.69□□□□□ -0.38
CNN1-207ENST00000588468 SMC1BQ8NDV3 1235 aa12.69□□□□□ -0.38
CNN1-207ENST00000588468 LINS1Q8NG48 757 aa12.69□□□□□ -0.38
CNN1-207ENST00000588468 A0A1B0GUL6 1792 aa12.69□□□□□ -0.38
CNN1-207ENST00000588468 PPIP5K2O43314 1243 aa12.68□□□□□ -0.38
CNN1-207ENST00000588468 DDNO94850 711 aaPredicted RBP12.68□□□□□ -0.38
CNN1-207ENST00000588468 EIF6P56537 245 aaKnown RBP12.68□□□□□ -0.38
CNN1-207ENST00000588468 CWF19L2Q2TBE0 894 aaKnown RBP12.68□□□□□ -0.38
CNN1-207ENST00000588468 SLC51AQ86UW1 340 aa12.68□□□□□ -0.38
CNN1-207ENST00000588468 NIM1KQ8IY84 436 aa12.68□□□□□ -0.38
CNN1-207ENST00000588468 GPC2Q8N158 579 aa12.68□□□□□ -0.38
CNN1-207ENST00000588468 CELF1Q92879 486 aaKnown RBP12.68□□□□□ -0.38
CNN1-207ENST00000588468 POTECB2RU33 542 aa12.67□□□□□ -0.38
CNN1-207ENST00000588468 RPS8P62241 208 aaKnown RBP12.67□□□□□ -0.38
CNN1-207ENST00000588468 SLFN5Q08AF3 891 aa12.67□□□□□ -0.38
CNN1-207ENST00000588468 KIAA2012Q0VF49 1180 aa12.67□□□□□ -0.38
CNN1-207ENST00000588468 GCKRQ14397 625 aa12.67□□□□□ -0.38
CNN1-207ENST00000588468 CDC5LQ99459 802 aaKnown RBP12.67□□□□□ -0.38
CNN1-207ENST00000588468 PLA2G12BQ9BX93 195 aa12.67□□□□□ -0.38
CNN1-207ENST00000588468 H7C1W4 665 aa12.66□□□□□ -0.38
CNN1-207ENST00000588468 APLP1P51693 650 aa12.66□□□□□ -0.38
CNN1-207ENST00000588468 AOC3Q16853 763 aa12.66□□□□□ -0.38
CNN1-207ENST00000588468 UBE3BQ7Z3V4 1068 aa12.66□□□□□ -0.38
CNN1-207ENST00000588468 CT47B1P0C2W7 299 aaPredicted RBP12.65□□□□□ -0.38
CNN1-207ENST00000588468 DIEXFQ68CQ4 756 aaKnown RBP12.65□□□□□ -0.38
CNN1-207ENST00000588468 SEC31BQ9NQW1 1179 aa12.65□□□□□ -0.38
CNN1-207ENST00000588468 PODXL2Q9NZ53 605 aa12.65□□□□□ -0.38
CNN1-207ENST00000588468 HACL1Q9UJ83 578 aa12.65□□□□□ -0.38
CNN1-207ENST00000588468 ZNRF3Q9ULT6 936 aa12.65□□□□□ -0.38
CNN1-207ENST00000588468 PTPRCP08575 1304 aa12.64□□□□□ -0.39
CNN1-207ENST00000588468 SCN9AQ15858 1988 aa12.64□□□□□ -0.39
CNN1-207ENST00000588468 CASP7P55210 303 aa12.64□□□□□ -0.39
CNN1-207ENST00000588468 ALDH1L2Q3SY69 923 aa12.64□□□□□ -0.39
CNN1-207ENST00000588468 BEND3Q5T5X7 828 aa12.64□□□□□ -0.39
CNN1-207ENST00000588468 LDHDQ86WU2 507 aa12.64□□□□□ -0.39
CNN1-207ENST00000588468 ANKRD18AQ8IVF6 992 aa12.64□□□□□ -0.39
CNN1-207ENST00000588468 TRMT2AQ8IZ69 625 aaKnown RBP12.64□□□□□ -0.39
CNN1-207ENST00000588468 TTLL11Q8NHH1 800 aa12.64□□□□□ -0.39
CNN1-207ENST00000588468 JARID2Q92833 1246 aaPredicted RBP12.64□□□□□ -0.39
CNN1-207ENST00000588468 EYA3Q99504 573 aa12.64□□□□□ -0.39
CNN1-207ENST00000588468 TAF1DQ9H5J8 278 aaPredicted RBP12.64□□□□□ -0.39
CNN1-207ENST00000588468 F6X3S4 739 aa12.63□□□□□ -0.39
CNN1-207ENST00000588468 ALDH1L1O75891 902 aa12.63□□□□□ -0.39
CNN1-207ENST00000588468 LMOD1P29536 600 aaPredicted RBP12.63□□□□□ -0.39
CNN1-207ENST00000588468 GREM2Q9H772 168 aa12.63□□□□□ -0.39
CNN1-207ENST00000588468 NSFL1CQ9UNZ2 370 aaKnown RBP12.63□□□□□ -0.39
CNN1-207ENST00000588468 XDHP47989 1333 aa12.62□□□□□ -0.39
CNN1-207ENST00000588468 GRM8O00222 908 aa12.62□□□□□ -0.39
CNN1-207ENST00000588468 EPHX2P34913 555 aa12.62□□□□□ -0.39
CNN1-207ENST00000588468 GPSM2P81274 684 aa12.62□□□□□ -0.39
CNN1-207ENST00000588468 WASHC4Q2M389 1173 aa12.62□□□□□ -0.39
CNN1-207ENST00000588468 CHADLQ6NUI6 762 aa12.62□□□□□ -0.39
CNN1-207ENST00000588468 PNMA8AQ86V59 439 aaPredicted RBP12.62□□□□□ -0.39
CNN1-207ENST00000588468 MRPL50Q8N5N7 158 aaKnown RBP12.62□□□□□ -0.39
CNN1-207ENST00000588468 TBC1D16Q8TBP0 767 aa12.62□□□□□ -0.39
CNN1-207ENST00000588468 GJA3Q9Y6H8 435 aa12.62□□□□□ -0.39
CNN1-207ENST00000588468 ZNF646O15015 1829 aaPredicted RBP12.62□□□□□ -0.39
CNN1-207ENST00000588468 ZNF609O15014 1411 aa12.62□□□□□ -0.39
CNN1-207ENST00000588468 TRPM7Q96QT4 1865 aa12.61□□□□□ -0.39
CNN1-207ENST00000588468 C6orf229H3BNL8 230 aa12.61□□□□□ -0.39
CNN1-207ENST00000588468 UFL1O94874 794 aa12.61□□□□□ -0.39
CNN1-207ENST00000588468 SCNN1DP51172 638 aa12.61□□□□□ -0.39
CNN1-207ENST00000588468 TNIP1Q15025 636 aa12.61□□□□□ -0.39
CNN1-207ENST00000588468 FAM161AQ3B820 660 aa12.61□□□□□ -0.39
CNN1-207ENST00000588468 CIAPIN1Q6FI81 312 aa12.61□□□□□ -0.39
CNN1-207ENST00000588468 SSH1Q8WYL5 1049 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms