RNA–Protein interactions for RNA: ENST00000588411.5

CIRBP-219, Transcript of cold inducible RNA binding protein, human

TSL 5

Gene CIRBP, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-219	ENST00000588411	GPC2	Q8N158	579 aa		28	■■■□□ 2.07
CIRBP-219	ENST00000588411	CWC25	Q9NXE8	425 aa	Predicted RBP	28	■■■□□ 2.07
CIRBP-219	ENST00000588411	MPND	Q8N594	471 aa		27.99	■■■□□ 2.07
CIRBP-219	ENST00000588411	MAP3K2	Q9Y2U5	619 aa		27.99	■■■□□ 2.07
CIRBP-219	ENST00000588411	LAMB2	P55268	1798 aa		27.99	■■■□□ 2.07
CIRBP-219	ENST00000588411	KSR2	Q6VAB6	950 aa		27.98	■■■□□ 2.07
CIRBP-219	ENST00000588411	RTFDC1	Q9BY42	306 aa	Predicted RBP	27.98	■■■□□ 2.07
CIRBP-219	ENST00000588411	HACL1	Q9UJ83	578 aa		27.98	■■■□□ 2.07
CIRBP-219	ENST00000588411	NEXN	Q0ZGT2	675 aa		27.97	■■■□□ 2.07
CIRBP-219	ENST00000588411	CHADL	Q6NUI6	762 aa		27.97	■■■□□ 2.07
CIRBP-219	ENST00000588411	TAF1D	Q9H5J8	278 aa	Predicted RBP	27.97	■■■□□ 2.07
CIRBP-219	ENST00000588411	SLC4A2	P04920	1241 aa		27.96	■■■□□ 2.07
CIRBP-219	ENST00000588411	PCCA	P05165	728 aa	Predicted RBP	27.96	■■■□□ 2.07
CIRBP-219	ENST00000588411	SLC51A	Q86UW1	340 aa		27.96	■■■□□ 2.07
CIRBP-219	ENST00000588411	PI4KAP2	A4QPH2	592 aa		27.95	■■■□□ 2.06
CIRBP-219	ENST00000588411	LDHD	Q86WU2	507 aa		27.95	■■■□□ 2.06
CIRBP-219	ENST00000588411	PI4KAP1	Q8N8J0	262 aa		27.95	■■■□□ 2.06
CIRBP-219	ENST00000588411	MYH16	Q9H6N6	1097 aa		27.95	■■■□□ 2.06
CIRBP-219	ENST00000588411	GJA3	Q9Y6H8	435 aa		27.95	■■■□□ 2.06
CIRBP-219	ENST00000588411	DDX60	Q8IY21	1712 aa	Known RBP	27.95	■■■□□ 2.06
CIRBP-219	ENST00000588411	SCN4A	P35499	1836 aa		27.95	■■■□□ 2.06
CIRBP-219	ENST00000588411	AOC3	Q16853	763 aa		27.94	■■■□□ 2.06
CIRBP-219	ENST00000588411	LMOD1	P29536	600 aa	Predicted RBP	27.93	■■■□□ 2.06
CIRBP-219	ENST00000588411	PNMA8A	Q86V59	439 aa	Predicted RBP	27.93	■■■□□ 2.06
CIRBP-219	ENST00000588411	PDE8A	O60658	829 aa		27.92	■■■□□ 2.06
CIRBP-219	ENST00000588411	EPHX2	P34913	555 aa		27.92	■■■□□ 2.06
CIRBP-219	ENST00000588411	CCDC152	Q4G0S7	254 aa		27.92	■■■□□ 2.06
CIRBP-219	ENST00000588411	EAPP	Q56P03	285 aa	Predicted RBP	27.92	■■■□□ 2.06
CIRBP-219	ENST00000588411	CELF1	Q92879	486 aa	Known RBP	27.92	■■■□□ 2.06
CIRBP-219	ENST00000588411	DNAJC5G	Q8N7S2	189 aa		27.91	■■■□□ 2.06
CIRBP-219	ENST00000588411	ZNRF3	Q9ULT6	936 aa		27.91	■■■□□ 2.06
CIRBP-219	ENST00000588411	COL4A5	P29400	1685 aa		27.91	■■■□□ 2.06
CIRBP-219	ENST00000588411	RPS8	P62241	208 aa	Known RBP	27.9	■■■□□ 2.06
CIRBP-219	ENST00000588411	EXOSC9	Q06265	439 aa	Known RBP	27.9	■■■□□ 2.06
CIRBP-219	ENST00000588411	KIAA2012	Q0VF49	1180 aa		27.9	■■■□□ 2.06
CIRBP-219	ENST00000588411	FLII	Q13045	1269 aa		27.89	■■■□□ 2.06
CIRBP-219	ENST00000588411	NSFL1C	Q9UNZ2	370 aa	Known RBP	27.89	■■■□□ 2.06
CIRBP-219	ENST00000588411	CDHR2	Q9BYE9	1310 aa		27.89	■■■□□ 2.05
CIRBP-219	ENST00000588411	VAMP4	O75379	141 aa		27.88	■■■□□ 2.05
CIRBP-219	ENST00000588411	POTEI	P0CG38	1075 aa		27.88	■■■□□ 2.05
CIRBP-219	ENST00000588411	POTEJ	P0CG39	1038 aa		27.88	■■■□□ 2.05
CIRBP-219	ENST00000588411	HTRA3	P83110	453 aa		27.88	■■■□□ 2.05
CIRBP-219	ENST00000588411	FKBP5	Q13451	457 aa	Predicted RBP	27.88	■■■□□ 2.05
CIRBP-219	ENST00000588411	G2E3	Q7L622	706 aa		27.88	■■■□□ 2.05
CIRBP-219	ENST00000588411	CLEC11A	Q9Y240	323 aa		27.88	■■■□□ 2.05
CIRBP-219	ENST00000588411	IGKV5-2	P06315	115 aa		27.87	■■■□□ 2.05
CIRBP-219	ENST00000588411	KLRG1	Q96E93	195 aa		27.87	■■■□□ 2.05
CIRBP-219	ENST00000588411	LRRC37A	A6NMS7	1700 aa		27.85	■■■□□ 2.05
CIRBP-219	ENST00000588411	NEURL1B	A8MQ27	555 aa		27.85	■■■□□ 2.05
CIRBP-219	ENST00000588411	JARID2	Q92833	1246 aa	Predicted RBP	27.85	■■■□□ 2.05
CIRBP-219	ENST00000588411	EYA3	Q99504	573 aa		27.85	■■■□□ 2.05
CIRBP-219	ENST00000588411	C6orf229	H3BNL8	230 aa		27.84	■■■□□ 2.05
CIRBP-219	ENST00000588411	TNIP1	Q15025	636 aa		27.84	■■■□□ 2.05
CIRBP-219	ENST00000588411	WASHC4	Q2M389	1173 aa		27.84	■■■□□ 2.05
CIRBP-219	ENST00000588411	CWF19L2	Q2TBE0	894 aa	Known RBP	27.84	■■■□□ 2.05
CIRBP-219	ENST00000588411	SCNN1D	P51172	638 aa		27.83	■■■□□ 2.05
CIRBP-219	ENST00000588411	CTSW	P56202	376 aa		27.83	■■■□□ 2.05
CIRBP-219	ENST00000588411	CXCL9	Q07325	125 aa		27.83	■■■□□ 2.05
CIRBP-219	ENST00000588411	CIAPIN1	Q6FI81	312 aa		27.83	■■■□□ 2.05
CIRBP-219	ENST00000588411	DNAAF4	Q8WXU2	420 aa		27.83	■■■□□ 2.05
CIRBP-219	ENST00000588411	SPINK5	Q9NQ38	1064 aa	Predicted RBP	27.83	■■■□□ 2.05
CIRBP-219	ENST00000588411	SEC31B	Q9NQW1	1179 aa		27.83	■■■□□ 2.05
CIRBP-219	ENST00000588411	TAF1	P21675	1872 aa		27.83	■■■□□ 2.04
CIRBP-219	ENST00000588411	GPSM2	P81274	684 aa		27.82	■■■□□ 2.04
CIRBP-219	ENST00000588411	ANKRD18A	Q8IVF6	992 aa		27.82	■■■□□ 2.04
CIRBP-219	ENST00000588411	CCDC85A	Q96PX6	553 aa	Predicted RBP	27.82	■■■□□ 2.04
CIRBP-219	ENST00000588411	CDC5L	Q99459	802 aa	Known RBP	27.82	■■■□□ 2.04
CIRBP-219	ENST00000588411	ANKIB1	Q9P2G1	1089 aa		27.81	■■■□□ 2.04
CIRBP-219	ENST00000588411	USP50	Q70EL3	339 aa	Predicted RBP	27.8	■■■□□ 2.04
CIRBP-219	ENST00000588411	UBE3B	Q7Z3V4	1068 aa		27.8	■■■□□ 2.04
CIRBP-219	ENST00000588411	LINS1	Q8NG48	757 aa		27.8	■■■□□ 2.04
CIRBP-219	ENST00000588411	CREBZF	Q9NS37	354 aa		27.8	■■■□□ 2.04
CIRBP-219	ENST00000588411	DUOX1	Q9NRD9	1551 aa		27.8	■■■□□ 2.04
CIRBP-219	ENST00000588411	CACNA1F	O60840	1977 aa		27.79	■■■□□ 2.04
CIRBP-219	ENST00000588411	EPS15	P42566	896 aa		27.79	■■■□□ 2.04
CIRBP-219	ENST00000588411	GCKR	Q14397	625 aa		27.79	■■■□□ 2.04
CIRBP-219	ENST00000588411	BCL2L13	Q9BXK5	485 aa		27.79	■■■□□ 2.04
CIRBP-219	ENST00000588411	PODXL2	Q9NZ53	605 aa		27.79	■■■□□ 2.04
CIRBP-219	ENST00000588411	GPRC5D	Q9NZD1	345 aa		27.79	■■■□□ 2.04
CIRBP-219	ENST00000588411	POLL	Q9UGP5	575 aa		27.79	■■■□□ 2.04
CIRBP-219	ENST00000588411		H7C1W4	665 aa		27.78	■■■□□ 2.04
CIRBP-219	ENST00000588411	RAD17	O75943	681 aa		27.78	■■■□□ 2.04
CIRBP-219	ENST00000588411	TBC1D16	Q8TBP0	767 aa		27.78	■■■□□ 2.04
CIRBP-219	ENST00000588411	GGA1	Q9UJY5	639 aa		27.78	■■■□□ 2.04
CIRBP-219	ENST00000588411	ZNF521	Q96K83	1311 aa		27.77	■■■□□ 2.04
CIRBP-219	ENST00000588411	PASK	Q96RG2	1323 aa		27.77	■■■□□ 2.04
CIRBP-219	ENST00000588411	RIMBP2	O15034	1052 aa		27.77	■■■□□ 2.04
CIRBP-219	ENST00000588411	UFL1	O94874	794 aa		27.77	■■■□□ 2.04
CIRBP-219	ENST00000588411	GMPS	P49915	693 aa	Predicted RBP	27.77	■■■□□ 2.04
CIRBP-219	ENST00000588411	CNTROB	Q8N137	903 aa		27.77	■■■□□ 2.04
CIRBP-219	ENST00000588411	TTLL11	Q8NHH1	800 aa		27.77	■■■□□ 2.04
CIRBP-219	ENST00000588411	ZC3H12C	Q9C0D7	883 aa	Known RBP	27.77	■■■□□ 2.04
CIRBP-219	ENST00000588411	ADARB2	Q9NS39	739 aa	Known RBP	27.77	■■■□□ 2.04
CIRBP-219	ENST00000588411	RTL9	Q8NET4	1388 aa		27.76	■■■□□ 2.03
CIRBP-219	ENST00000588411	MAP1S	Q66K74	1059 aa	Predicted RBP	27.76	■■■□□ 2.03
CIRBP-219	ENST00000588411	JMY	Q8N9B5	988 aa		27.76	■■■□□ 2.03
CIRBP-219	ENST00000588411		G3V3G9	751 aa		27.75	■■■□□ 2.03
CIRBP-219	ENST00000588411	ITGBL1	O95965	494 aa	Predicted RBP	27.75	■■■□□ 2.03
CIRBP-219	ENST00000588411	DCAF8	Q5TAQ9	597 aa		27.75	■■■□□ 2.03
CIRBP-219	ENST00000588411	DBNDD1	Q9H9R9	158 aa		27.75	■■■□□ 2.03

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