RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 ZNF541Q9H0D2 1346 aa25.04■■□□□ 1.6
TPM4-208ENST00000588410 IQCA1LA6NCM1 817 aa25.03■■□□□ 1.6
TPM4-208ENST00000588410 FZD9O00144 591 aa25.03■■□□□ 1.6
TPM4-208ENST00000588410 APLP1P51693 650 aa25.03■■□□□ 1.6
TPM4-208ENST00000588410 EIF6P56537 245 aaKnown RBP25.03■■□□□ 1.6
TPM4-208ENST00000588410 G2E3Q7L622 706 aa25.03■■□□□ 1.6
TPM4-208ENST00000588410 MPNDQ8N594 471 aa25.03■■□□□ 1.6
TPM4-208ENST00000588410 PPIP5K2O43314 1243 aa25.02■■□□□ 1.6
TPM4-208ENST00000588410 FLIIQ13045 1269 aa25.02■■□□□ 1.6
TPM4-208ENST00000588410 NIM1KQ8IY84 436 aa25.02■■□□□ 1.6
TPM4-208ENST00000588410 VPS33BQ9H267 617 aa25.02■■□□□ 1.6
TPM4-208ENST00000588410 FKBP5Q13451 457 aaPredicted RBP25.01■■□□□ 1.59
TPM4-208ENST00000588410 JARID2Q92833 1246 aaPredicted RBP25.01■■□□□ 1.59
TPM4-208ENST00000588410 L3MBTL3Q96JM7 780 aaPredicted RBP25.01■■□□□ 1.59
TPM4-208ENST00000588410 PDE8AO60658 829 aa25■■□□□ 1.59
TPM4-208ENST00000588410 CELF1Q92879 486 aaKnown RBP25■■□□□ 1.59
TPM4-208ENST00000588410 IGKV5-2P06315 115 aa24.99■■□□□ 1.59
TPM4-208ENST00000588410 AOC3Q16853 763 aa24.99■■□□□ 1.59
TPM4-208ENST00000588410 CCDC152Q4G0S7 254 aa24.99■■□□□ 1.59
TPM4-208ENST00000588410 RTFDC1Q9BY42 306 aaPredicted RBP24.99■■□□□ 1.59
TPM4-208ENST00000588410 GPC2Q8N158 579 aa24.98■■□□□ 1.59
TPM4-208ENST00000588410 GJA3Q9Y6H8 435 aa24.98■■□□□ 1.59
TPM4-208ENST00000588410 WDR90Q96KV7 1748 aa24.98■■□□□ 1.59
TPM4-208ENST00000588410 RPS8P62241 208 aaKnown RBP24.97■■□□□ 1.59
TPM4-208ENST00000588410 CWF19L2Q2TBE0 894 aaKnown RBP24.97■■□□□ 1.59
TPM4-208ENST00000588410 HACL1Q9UJ83 578 aa24.97■■□□□ 1.59
TPM4-208ENST00000588410 CCDC88AQ3V6T2 1871 aa24.96■■□□□ 1.59
TPM4-208ENST00000588410 CDHR2Q9BYE9 1310 aa24.96■■□□□ 1.59
TPM4-208ENST00000588410 NEURL1BA8MQ27 555 aa24.96■■□□□ 1.59
TPM4-208ENST00000588410 CCER2I3L3R5 266 aa24.96■■□□□ 1.59
TPM4-208ENST00000588410 DNAAF4Q8WXU2 420 aa24.96■■□□□ 1.59
TPM4-208ENST00000588410 NSFL1CQ9UNZ2 370 aaKnown RBP24.96■■□□□ 1.59
TPM4-208ENST00000588410 ZNF521Q96K83 1311 aa24.95■■□□□ 1.58
TPM4-208ENST00000588410 CCDC85AQ96PX6 553 aaPredicted RBP24.95■■□□□ 1.58
TPM4-208ENST00000588410 TAF1DQ9H5J8 278 aaPredicted RBP24.95■■□□□ 1.58
TPM4-208ENST00000588410 SEC31BQ9NQW1 1179 aa24.95■■□□□ 1.58
TPM4-208ENST00000588410 DICER1Q9UPY3 1922 aaKnown RBP24.94■■□□□ 1.58
TPM4-208ENST00000588410 LMOD1P29536 600 aaPredicted RBP24.93■■□□□ 1.58
TPM4-208ENST00000588410 KIAA2012Q0VF49 1180 aa24.93■■□□□ 1.58
TPM4-208ENST00000588410 EAPPQ56P03 285 aaPredicted RBP24.93■■□□□ 1.58
TPM4-208ENST00000588410 CHADLQ6NUI6 762 aa24.93■■□□□ 1.58
TPM4-208ENST00000588410 ZNRF3Q9ULT6 936 aa24.93■■□□□ 1.58
TPM4-208ENST00000588410 E9PSI1 815 aa24.92■■□□□ 1.58
TPM4-208ENST00000588410 EPHX2P34913 555 aa24.92■■□□□ 1.58
TPM4-208ENST00000588410 CTSWP56202 376 aa24.92■■□□□ 1.58
TPM4-208ENST00000588410 LINS1Q8NG48 757 aa24.92■■□□□ 1.58
TPM4-208ENST00000588410 C6orf229H3BNL8 230 aa24.91■■□□□ 1.58
TPM4-208ENST00000588410 GPSM2P81274 684 aa24.91■■□□□ 1.58
TPM4-208ENST00000588410 GCKRQ14397 625 aa24.91■■□□□ 1.58
TPM4-208ENST00000588410 UBE3BQ7Z3V4 1068 aa24.91■■□□□ 1.58
TPM4-208ENST00000588410 LDHDQ86WU2 507 aa24.91■■□□□ 1.58
TPM4-208ENST00000588410 DDX60Q8IY21 1712 aaKnown RBP24.9■■□□□ 1.58
TPM4-208ENST00000588410 H7C1W4 665 aa24.9■■□□□ 1.58
TPM4-208ENST00000588410 POTEIP0CG38 1075 aa24.9■■□□□ 1.58
TPM4-208ENST00000588410 POTEJP0CG39 1038 aa24.9■■□□□ 1.58
TPM4-208ENST00000588410 WASHC4Q2M389 1173 aa24.9■■□□□ 1.58
TPM4-208ENST00000588410 PNMA8AQ86V59 439 aaPredicted RBP24.9■■□□□ 1.58
TPM4-208ENST00000588410 ANKRD18AQ8IVF6 992 aa24.9■■□□□ 1.58
TPM4-208ENST00000588410 CDC5LQ99459 802 aaKnown RBP24.9■■□□□ 1.58
TPM4-208ENST00000588410 EYA3Q99504 573 aa24.9■■□□□ 1.58
TPM4-208ENST00000588410 CLEC11AQ9Y240 323 aa24.9■■□□□ 1.58
TPM4-208ENST00000588410 COL4A5P29400 1685 aa24.9■■□□□ 1.58
TPM4-208ENST00000588410 LAMB2P55268 1798 aa24.9■■□□□ 1.58
TPM4-208ENST00000588410 ANKIB1Q9P2G1 1089 aa24.89■■□□□ 1.58
TPM4-208ENST00000588410 F6X3S4 739 aa24.88■■□□□ 1.57
TPM4-208ENST00000588410 TTLL11Q8NHH1 800 aa24.88■■□□□ 1.57
TPM4-208ENST00000588410 RIMBP2O15034 1052 aa24.87■■□□□ 1.57
TPM4-208ENST00000588410 HTRA3P83110 453 aa24.87■■□□□ 1.57
TPM4-208ENST00000588410 CXCL9Q07325 125 aa24.87■■□□□ 1.57
TPM4-208ENST00000588410 TNIP1Q15025 636 aa24.87■■□□□ 1.57
TPM4-208ENST00000588410 CIAPIN1Q6FI81 312 aa24.87■■□□□ 1.57
TPM4-208ENST00000588410 POLLQ9UGP5 575 aa24.87■■□□□ 1.57
TPM4-208ENST00000588410 TBC1D16Q8TBP0 767 aa24.86■■□□□ 1.57
TPM4-208ENST00000588410 RAD17O75943 681 aa24.85■■□□□ 1.57
TPM4-208ENST00000588410 GREM2Q9H772 168 aa24.85■■□□□ 1.57
TPM4-208ENST00000588410 PODXL2Q9NZ53 605 aa24.85■■□□□ 1.57
TPM4-208ENST00000588410 GGA1Q9UJY5 639 aa24.85■■□□□ 1.57
TPM4-208ENST00000588410 UFL1O94874 794 aa24.84■■□□□ 1.57
TPM4-208ENST00000588410 SCNN1DP51172 638 aa24.84■■□□□ 1.57
TPM4-208ENST00000588410 SLFN5Q08AF3 891 aa24.84■■□□□ 1.57
TPM4-208ENST00000588410 BEND3Q5T5X7 828 aa24.84■■□□□ 1.57
TPM4-208ENST00000588410 PLA2G12BQ9BX93 195 aa24.84■■□□□ 1.57
TPM4-208ENST00000588410 ZC3H12CQ9C0D7 883 aaKnown RBP24.84■■□□□ 1.57
TPM4-208ENST00000588410 G3V3G9 751 aa24.83■■□□□ 1.57
TPM4-208ENST00000588410 EPS15P42566 896 aa24.83■■□□□ 1.57
TPM4-208ENST00000588410 DCAF8Q5TAQ9 597 aa24.83■■□□□ 1.57
TPM4-208ENST00000588410 SLC4A10Q6U841 1118 aa24.83■■□□□ 1.57
TPM4-208ENST00000588410 BCL2L13Q9BXK5 485 aa24.83■■□□□ 1.57
TPM4-208ENST00000588410 DBNDD1Q9H9R9 158 aa24.83■■□□□ 1.57
TPM4-208ENST00000588410 GMPSP49915 693 aaPredicted RBP24.82■■□□□ 1.56
TPM4-208ENST00000588410 DNAJC5GQ8N7S2 189 aa24.82■■□□□ 1.56
TPM4-208ENST00000588410 RTL9Q8NET4 1388 aa24.81■■□□□ 1.56
TPM4-208ENST00000588410 IGHMBP2P38935 993 aaKnown RBP24.81■■□□□ 1.56
TPM4-208ENST00000588410 CASP7P55210 303 aa24.81■■□□□ 1.56
TPM4-208ENST00000588410 DOK7Q18PE1 504 aa24.81■■□□□ 1.56
TPM4-208ENST00000588410 GPR101Q96P66 508 aaPredicted RBP24.81■■□□□ 1.56
TPM4-208ENST00000588410 BSDC1Q9NW68 430 aaPredicted RBP24.81■■□□□ 1.56
TPM4-208ENST00000588410 GPRC5DQ9NZD1 345 aa24.81■■□□□ 1.56
TPM4-208ENST00000588410 XDHP47989 1333 aa24.81■■□□□ 1.56
TPM4-208ENST00000588410 DUOX1Q9NRD9 1551 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms