RNA–Protein interactions for RNA: ENST00000588019.1

NLE1-204, Transcript of notchless homolog 1, humanhuman

TSL 5

Gene NLE1, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-204ENST00000588019 CCDC152Q4G0S7 254 aa20.06■□□□□ 0.8
NLE1-204ENST00000588019 ERC1Q8IUD2 1116 aa20.06■□□□□ 0.8
NLE1-204ENST00000588019 NLRP3Q96P20 1036 aa20.06■□□□□ 0.8
NLE1-204ENST00000588019 EXOC6BQ9Y2D4 811 aa20.06■□□□□ 0.8
NLE1-204ENST00000588019 ANKRD18BA2A2Z9 1011 aa20.05■□□□□ 0.8
NLE1-204ENST00000588019 PTPN12Q05209 780 aaKnown RBP20.05■□□□□ 0.8
NLE1-204ENST00000588019 DDR1Q08345 913 aa20.05■□□□□ 0.8
NLE1-204ENST00000588019 G3BP1Q13283 466 aaKnown RBP eCLIP20.05■□□□□ 0.8
NLE1-204ENST00000588019 SF3B3Q15393 1217 aaKnown RBP20.05■□□□□ 0.8
NLE1-204ENST00000588019 CHD1LQ86WJ1 897 aa20.05■□□□□ 0.8
NLE1-204ENST00000588019 PARP3Q9Y6F1 533 aa20.05■□□□□ 0.8
NLE1-204ENST00000588019 RIC1Q4ADV7 1423 aa20.04■□□□□ 0.8
NLE1-204ENST00000588019 OS9Q13438 667 aaPredicted RBP20.04■□□□□ 0.8
NLE1-204ENST00000588019 FAM161AQ3B820 660 aa20.04■□□□□ 0.8
NLE1-204ENST00000588019 PRR5LQ6MZQ0 368 aa20.04■□□□□ 0.8
NLE1-204ENST00000588019 LRRCC1Q9C099 1032 aa20.04■□□□□ 0.8
NLE1-204ENST00000588019 FBXO3Q9UK99 471 aa20.04■□□□□ 0.8
NLE1-204ENST00000588019 PA2G4Q9UQ80 394 aaKnown RBP20.04■□□□□ 0.8
NLE1-204ENST00000588019 RTL9Q8NET4 1388 aa20.04■□□□□ 0.8
NLE1-204ENST00000588019 ABCC12Q96J65 1359 aa20.04■□□□□ 0.8
NLE1-204ENST00000588019 LAMB2P55268 1798 aa20.03■□□□□ 0.8
NLE1-204ENST00000588019 MMP10P09238 476 aa20.03■□□□□ 0.8
NLE1-204ENST00000588019 ITGA6P23229 1130 aa20.03■□□□□ 0.8
NLE1-204ENST00000588019 TAF7LQ5H9L4 462 aa20.03■□□□□ 0.8
NLE1-204ENST00000588019 KIF1BPQ96EK5 621 aa20.03■□□□□ 0.8
NLE1-204ENST00000588019 GREM2Q9H772 168 aa20.03■□□□□ 0.8
NLE1-204ENST00000588019 MSL1Q68DK7 614 aa20.02■□□□□ 0.8
NLE1-204ENST00000588019 ILDR2Q71H61 639 aa20.02■□□□□ 0.8
NLE1-204ENST00000588019 CCDC85AQ96PX6 553 aaPredicted RBP20.02■□□□□ 0.8
NLE1-204ENST00000588019 DDX60Q8IY21 1712 aaKnown RBP20.02■□□□□ 0.79
NLE1-204ENST00000588019 APBB1O00213 710 aa20.01■□□□□ 0.79
NLE1-204ENST00000588019 CIAO1O76071 339 aa20.01■□□□□ 0.79
NLE1-204ENST00000588019 KLHDC4Q8TBB5 520 aa20.01■□□□□ 0.79
NLE1-204ENST00000588019 RHPN1Q8TCX5 695 aa20.01■□□□□ 0.79
NLE1-204ENST00000588019 LNPKQ9C0E8 428 aa20.01■□□□□ 0.79
NLE1-204ENST00000588019 SIL1Q9H173 461 aa20■□□□□ 0.79
NLE1-204ENST00000588019 EYA2O00167 538 aa19.99■□□□□ 0.79
NLE1-204ENST00000588019 IL15P40933 162 aaPredicted RBP19.99■□□□□ 0.79
NLE1-204ENST00000588019 PELP1Q8IZL8 1130 aaKnown RBP19.99■□□□□ 0.79
NLE1-204ENST00000588019 CCDC24Q8N4L8 307 aa19.99■□□□□ 0.79
NLE1-204ENST00000588019 CDC5LQ99459 802 aaKnown RBP19.99■□□□□ 0.79
NLE1-204ENST00000588019 MYH3P11055 1940 aa19.99■□□□□ 0.79
NLE1-204ENST00000588019 ZNF594Q96JF6 807 aaPredicted RBP19.98■□□□□ 0.79
NLE1-204ENST00000588019 BRIP1Q9BX63 1249 aa19.98■□□□□ 0.79
NLE1-204ENST00000588019 PDGFDQ9GZP0 370 aaPredicted RBP19.98■□□□□ 0.79
NLE1-204ENST00000588019 SMARCA5O60264 1052 aaPredicted RBP19.97■□□□□ 0.79
NLE1-204ENST00000588019 IGHMBP2P38935 993 aaKnown RBP19.97■□□□□ 0.79
NLE1-204ENST00000588019 LDHAL6AQ6ZMR3 332 aa19.97■□□□□ 0.79
NLE1-204ENST00000588019 C3orf67Q6ZVT6 689 aa19.97■□□□□ 0.79
NLE1-204ENST00000588019 SASH1O94885 1247 aa19.96■□□□□ 0.79
NLE1-204ENST00000588019 R3HDM1Q15032 1099 aaKnown RBP19.96■□□□□ 0.79
NLE1-204ENST00000588019 DDX46Q7L014 1031 aaKnown RBP19.96■□□□□ 0.79
NLE1-204ENST00000588019 ATG9AQ7Z3C6 839 aa19.96■□□□□ 0.79
NLE1-204ENST00000588019 CLASRPQ8N2M8 674 aaKnown RBP19.96■□□□□ 0.79
NLE1-204ENST00000588019 MPHOSPH8Q99549 860 aa19.96■□□□□ 0.79
NLE1-204ENST00000588019 SEC31BQ9NQW1 1179 aa19.96■□□□□ 0.79
NLE1-204ENST00000588019 NRXN2Q9P2S2 1712 aa19.96■□□□□ 0.79
NLE1-204ENST00000588019 KLRG2A4D1S0 409 aaPredicted RBP19.95■□□□□ 0.78
NLE1-204ENST00000588019 PDE6BP35913 854 aa19.95■□□□□ 0.78
NLE1-204ENST00000588019 RGS3P49796 1198 aa19.95■□□□□ 0.78
NLE1-204ENST00000588019 ANKRD18AQ8IVF6 992 aa19.95■□□□□ 0.78
NLE1-204ENST00000588019 MTFR1LQ9H019 292 aa19.95■□□□□ 0.78
NLE1-204ENST00000588019 CNNM1Q9NRU3 951 aa19.95■□□□□ 0.78
NLE1-204ENST00000588019 PDE4AP27815 886 aa19.94■□□□□ 0.78
NLE1-204ENST00000588019 CRY2Q49AN0 593 aa19.94■□□□□ 0.78
NLE1-204ENST00000588019 LRRC24Q50LG9 513 aa19.94■□□□□ 0.78
NLE1-204ENST00000588019 RPGRQ92834 1020 aaKnown RBP19.94■□□□□ 0.78
NLE1-204ENST00000588019 PUS3Q9BZE2 481 aaKnown RBP19.94■□□□□ 0.78
NLE1-204ENST00000588019 IL1RAPL2Q9NP60 686 aa19.94■□□□□ 0.78
NLE1-204ENST00000588019 CEP126Q9P2H0 1117 aa19.94■□□□□ 0.78
NLE1-204ENST00000588019 RIPOR2Q9Y4F9 1068 aa19.94■□□□□ 0.78
NLE1-204ENST00000588019 SKAP1Q86WV1 359 aa19.93■□□□□ 0.78
NLE1-204ENST00000588019 RBM17Q96I25 401 aaKnown RBP19.93■□□□□ 0.78
NLE1-204ENST00000588019 GPR108Q9NPR9 543 aa19.93■□□□□ 0.78
NLE1-204ENST00000588019 RPS8P62241 208 aaKnown RBP19.92■□□□□ 0.78
NLE1-204ENST00000588019 TFCP2Q12800 502 aa19.92■□□□□ 0.78
NLE1-204ENST00000588019 BCL11AQ9H165 835 aa19.92■□□□□ 0.78
NLE1-204ENST00000588019 MROH5Q6ZUA9 1318 aa19.92■□□□□ 0.78
NLE1-204ENST00000588019 TNRC6CQ9HCJ0 1690 aaKnown RBP19.91■□□□□ 0.78
NLE1-204ENST00000588019 POLD1P28340 1107 aa19.91■□□□□ 0.78
NLE1-204ENST00000588019 HOXA10P31260 410 aaPredicted RBP19.91■□□□□ 0.78
NLE1-204ENST00000588019 METTL24Q5JXM2 366 aa19.91■□□□□ 0.78
NLE1-204ENST00000588019 C16orf71Q8IYS4 520 aaPredicted RBP19.91■□□□□ 0.78
NLE1-204ENST00000588019 BSDC1Q9NW68 430 aaPredicted RBP19.91■□□□□ 0.78
NLE1-204ENST00000588019 AKAP2Q9Y2D5 859 aa19.91■□□□□ 0.78
NLE1-204ENST00000588019 LRP5O75197 1615 aa19.91■□□□□ 0.78
NLE1-204ENST00000588019 ZBTB7AO95365 584 aa19.9■□□□□ 0.78
NLE1-204ENST00000588019 IFIT2P09913 472 aaKnown RBP19.9■□□□□ 0.78
NLE1-204ENST00000588019 GRAPQ13588 217 aa19.9■□□□□ 0.78
NLE1-204ENST00000588019 AACSQ86V21 672 aa19.9■□□□□ 0.78
NLE1-204ENST00000588019 PLEKHM2Q8IWE5 1019 aa19.9■□□□□ 0.78
NLE1-204ENST00000588019 GRAPLQ8TC17 118 aaPredicted RBP19.9■□□□□ 0.78
NLE1-204ENST00000588019 CRAMP1Q96RY5 1269 aa19.9■□□□□ 0.78
NLE1-204ENST00000588019 CASZ1Q86V15 1759 aa19.9■□□□□ 0.78
NLE1-204ENST00000588019 NPR1P16066 1061 aa19.89■□□□□ 0.77
NLE1-204ENST00000588019 TNNI3KQ59H18 835 aa19.89■□□□□ 0.77
NLE1-204ENST00000588019 CELF1Q92879 486 aaKnown RBP19.89■□□□□ 0.77
NLE1-204ENST00000588019 FPGT-TNNI3KV9GXZ4 949 aa19.89■□□□□ 0.77
NLE1-204ENST00000588019 MX1P20591 662 aa19.88■□□□□ 0.77
NLE1-204ENST00000588019 EAF2Q96CJ1 260 aaPredicted RBP19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms