RNA–Protein interactions for RNA: ENST00000587987.5

U2AF1L4-208, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 1 (best)

Gene U2AF1L4, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-208	ENST00000587987	CAMTA2	O94983	1202 aa		11.97	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	HSPA8	P11142	646 aa	Known RBP	11.97	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	CCT4	P50991	539 aa	Known RBP	11.97	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	RRP1	P56182	461 aa	Known RBP	11.97	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	TRIM28	Q13263	835 aa	Known RBP	11.97	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	TCIRG1	Q13488	830 aa		11.97	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	FAM161A	Q3B820	660 aa		11.97	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	CCDC93	Q567U6	631 aa		11.97	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	FTSJ3	Q8IY81	847 aa	Known RBP	11.97	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	DZIP1L	Q8IYY4	767 aa	Known RBP	11.97	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	ABHD8	Q96I13	439 aa		11.97	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	HACL1	Q9UJ83	578 aa		11.97	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	SUPT16H	Q9Y5B9	1047 aa	Known RBP	11.97	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	BCOR	Q6W2J9	1755 aa		11.97	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	ITGBL1	O95965	494 aa	Predicted RBP	11.96	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	TRIM27	P14373	513 aa		11.96	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	PARP10	Q53GL7	1025 aa		11.96	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	ZBTB3	Q9H5J0	574 aa		11.96	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	ZNF277	Q9NRM2	450 aa	Predicted RBP	11.96	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	ABT1	Q9ULW3	272 aa	Known RBP	11.96	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	HDAC5	Q9UQL6	1122 aa		11.96	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	ADAMTSL1	Q8N6G6	1762 aa		11.95	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	IBTK	Q9P2D0	1353 aa	Predicted RBP	11.95	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	ALDH1L1	O75891	902 aa		11.95	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	EPHX2	P34913	555 aa		11.95	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	FKBP4	Q02790	459 aa	Known RBP eCLIP	11.95	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	MAP1S	Q66K74	1059 aa	Predicted RBP	11.95	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	INTS3	Q68E01	1043 aa	Known RBP	11.95	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	NBPF5P	Q86XG9	351 aa	Predicted RBP	11.95	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	CCDC191	Q8NCU4	936 aa		11.95	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	LINS1	Q8NG48	757 aa		11.95	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	SRCIN1	Q9C0H9	1055 aa		11.95	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	RASSF10	A6NK89	507 aa		11.94	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	HSP90B1	P14625	803 aa	Known RBP	11.94	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	HLF	Q16534	295 aa		11.94	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	DEFB115	Q30KQ5	88 aa		11.94	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	SLC4A10	Q6U841	1118 aa		11.94	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	OLFM4	Q6UX06	510 aa		11.94	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	PPP1R42	Q7Z4L9	355 aa		11.94	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	ZNF34	Q8IZ26	560 aa		11.94	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	MYD88	Q99836	296 aa		11.94	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	ABCC4	O15439	1325 aa		11.93	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	WDR33	Q9C0J8	1336 aa	Known RBP	11.93	□□□□□ -0.5
U2AF1L4-208	ENST00000587987		F6X3S4	739 aa		11.93	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	PLIN1	O60240	522 aa		11.93	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	NPR1	P16066	1061 aa		11.93	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	MAP2K1	Q02750	393 aa	Predicted RBP	11.93	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	AAMP	Q13685	434 aa		11.93	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	BEND3	Q5T5X7	828 aa		11.93	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.93	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	PNMA8A	Q86V59	439 aa	Predicted RBP	11.93	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	CNTROB	Q8N137	903 aa		11.93	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	C7orf43	Q8WVR3	580 aa		11.93	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	ISCA1	Q9BUE6	129 aa		11.93	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	NYX	Q9GZU5	481 aa		11.93	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	CWC25	Q9NXE8	425 aa	Predicted RBP	11.93	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	NIP7	Q9Y221	180 aa	Known RBP eCLIP	11.93	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	GRM1	Q13255	1194 aa		11.92	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	TPTE2	Q6XPS3	522 aa		11.92	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	DDX19B	Q9UMR2	479 aa		11.92	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	NUP98	P52948	1817 aa		11.92	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	CCDC85C	A6NKD9	419 aa		11.91	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	FAM177B	A6PVY3	158 aa		11.91	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	NEURL1B	A8MQ27	555 aa		11.91	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	IGKV5-2	P06315	115 aa		11.91	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	IARS	P41252	1262 aa	Known RBP	11.91	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	NLRP10	Q86W26	655 aa		11.91	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	RTKN2	Q8IZC4	609 aa		11.91	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	CLUAP1	Q96AJ1	413 aa		11.91	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	C9orf78	Q9NZ63	289 aa	Predicted RBP	11.91	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	THSD7B	Q9C0I4	1608 aa		11.9	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	ATP5J2-PTCD1	G3V325	749 aa		11.9	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	GNAI3	P08754	354 aa		11.9	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	MLLT1	Q03111	559 aa	Predicted RBP	11.9	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	GCKR	Q14397	625 aa		11.9	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	MVP	Q14764	893 aa	Known RBP	11.9	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	ITPRIP	Q8IWB1	547 aa		11.9	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	GPC2	Q8N158	579 aa		11.9	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	SYNE4	Q8N205	404 aa		11.9	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	TMEM57	Q8N5G2	664 aa		11.9	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	11.9	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	BEGAIN	Q9BUH8	593 aa		11.9	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	UTP14A	Q9BVJ6	771 aa	Known RBP	11.9	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	GJA3	Q9Y6H8	435 aa		11.9	□□□□□ -0.5
U2AF1L4-208	ENST00000587987	FZD9	O00144	591 aa		11.89	□□□□□ -0.51
U2AF1L4-208	ENST00000587987	PCCA	P05165	728 aa	Predicted RBP	11.89	□□□□□ -0.51
U2AF1L4-208	ENST00000587987	NEFL	P07196	543 aa		11.89	□□□□□ -0.51
U2AF1L4-208	ENST00000587987	GTF2E1	P29083	439 aa	Predicted RBP	11.89	□□□□□ -0.51
U2AF1L4-208	ENST00000587987	PANK1	Q8TE04	598 aa		11.89	□□□□□ -0.51
U2AF1L4-208	ENST00000587987	CAPNS2	Q96L46	248 aa		11.89	□□□□□ -0.51
U2AF1L4-208	ENST00000587987	TRMT112	Q9UI30	125 aa	Known RBP	11.89	□□□□□ -0.51
U2AF1L4-208	ENST00000587987		H7C1W4	665 aa		11.88	□□□□□ -0.51
U2AF1L4-208	ENST00000587987	GRM8	O00222	908 aa		11.88	□□□□□ -0.51
U2AF1L4-208	ENST00000587987	ZBTB7B	O15156	539 aa	Predicted RBP	11.88	□□□□□ -0.51
U2AF1L4-208	ENST00000587987	RLBP1	P12271	317 aa		11.88	□□□□□ -0.51
U2AF1L4-208	ENST00000587987	GPT	P24298	496 aa		11.88	□□□□□ -0.51
U2AF1L4-208	ENST00000587987	LMOD1	P29536	600 aa	Predicted RBP	11.88	□□□□□ -0.51
U2AF1L4-208	ENST00000587987	ECE1	P42892	770 aa		11.88	□□□□□ -0.51
U2AF1L4-208	ENST00000587987	FMR1	Q06787	632 aa	Known RBP eCLIP	11.88	□□□□□ -0.51
U2AF1L4-208	ENST00000587987	CWF19L2	Q2TBE0	894 aa	Known RBP	11.88	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms