RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 GRM1Q13255 1194 aa8.4□□□□□ -1.06
SDF2-205ENST00000587629 RALBP1Q15311 655 aa8.4□□□□□ -1.06
SDF2-205ENST00000587629 TRMT112Q9UI30 125 aaKnown RBP8.4□□□□□ -1.06
SDF2-205ENST00000587629 ATP6V0A2Q9Y487 856 aa8.4□□□□□ -1.06
SDF2-205ENST00000587629 SCN4AP35499 1836 aa8.4□□□□□ -1.07
SDF2-205ENST00000587629 IBTKQ9P2D0 1353 aaPredicted RBP8.39□□□□□ -1.07
SDF2-205ENST00000587629 ABCC4O15439 1325 aa8.39□□□□□ -1.07
SDF2-205ENST00000587629 TRAF5O00463 557 aa8.39□□□□□ -1.07
SDF2-205ENST00000587629 LMOD3Q0VAK6 560 aa8.39□□□□□ -1.07
SDF2-205ENST00000587629 DEFB115Q30KQ5 88 aa8.39□□□□□ -1.07
SDF2-205ENST00000587629 GRIPAP1Q4V328 841 aa8.39□□□□□ -1.07
SDF2-205ENST00000587629 SLC10A5Q5PT55 438 aa8.39□□□□□ -1.07
SDF2-205ENST00000587629 DPP8Q6V1X1 898 aaPredicted RBP8.39□□□□□ -1.07
SDF2-205ENST00000587629 PAXIP1Q6ZW49 1069 aaPredicted RBP8.39□□□□□ -1.07
SDF2-205ENST00000587629 NLRP10Q86W26 655 aa8.39□□□□□ -1.07
SDF2-205ENST00000587629 AIDAQ96BJ3 306 aa8.39□□□□□ -1.07
SDF2-205ENST00000587629 DDX21Q9NR30 783 aaKnown RBP eCLIP8.39□□□□□ -1.07
SDF2-205ENST00000587629 CHPF2Q9P2E5 772 aa8.39□□□□□ -1.07
SDF2-205ENST00000587629 CHL1O00533 1208 aa8.38□□□□□ -1.07
SDF2-205ENST00000587629 BBOX1O75936 387 aa8.38□□□□□ -1.07
SDF2-205ENST00000587629 PRR29P0C7W0 189 aa8.38□□□□□ -1.07
SDF2-205ENST00000587629 CD44P16070 742 aaKnown RBP8.38□□□□□ -1.07
SDF2-205ENST00000587629 CXCL9Q07325 125 aa8.38□□□□□ -1.07
SDF2-205ENST00000587629 MKRN4PQ13434 485 aaPredicted RBP8.38□□□□□ -1.07
SDF2-205ENST00000587629 TCIRG1Q13488 830 aa8.38□□□□□ -1.07
SDF2-205ENST00000587629 WDR43Q15061 677 aaKnown RBP eCLIP8.38□□□□□ -1.07
SDF2-205ENST00000587629 RTL5Q5HYW3 569 aaPredicted RBP8.38□□□□□ -1.07
SDF2-205ENST00000587629 DDX46Q7L014 1031 aaKnown RBP8.38□□□□□ -1.07
SDF2-205ENST00000587629 MPNDQ8N594 471 aa8.38□□□□□ -1.07
SDF2-205ENST00000587629 BABAM1Q9NWV8 329 aa8.38□□□□□ -1.07
SDF2-205ENST00000587629 ZNRF3Q9ULT6 936 aa8.38□□□□□ -1.07
SDF2-205ENST00000587629 TRIM35Q9UPQ4 493 aa8.38□□□□□ -1.07
SDF2-205ENST00000587629 RIC1Q4ADV7 1423 aa8.37□□□□□ -1.07
SDF2-205ENST00000587629 LTBP1Q14766 1721 aa8.37□□□□□ -1.07
SDF2-205ENST00000587629 MYBBP1AQ9BQG0 1328 aaKnown RBP8.37□□□□□ -1.07
SDF2-205ENST00000587629 WDR33Q9C0J8 1336 aaKnown RBP8.37□□□□□ -1.07
SDF2-205ENST00000587629 RASSF10A6NK89 507 aa8.37□□□□□ -1.07
SDF2-205ENST00000587629 ATP5J2-PTCD1G3V325 749 aa8.37□□□□□ -1.07
SDF2-205ENST00000587629 RAD17O75943 681 aa8.37□□□□□ -1.07
SDF2-205ENST00000587629 CTCFP49711 727 aaPredicted RBP8.37□□□□□ -1.07
SDF2-205ENST00000587629 GMPSP49915 693 aaPredicted RBP8.37□□□□□ -1.07
SDF2-205ENST00000587629 LBX1P52954 281 aa8.37□□□□□ -1.07
SDF2-205ENST00000587629 HSP90AB3PQ58FF7 597 aa8.37□□□□□ -1.07
SDF2-205ENST00000587629 HDGFL1Q5TGJ6 251 aa8.37□□□□□ -1.07
SDF2-205ENST00000587629 SP8Q8IXZ3 490 aa8.37□□□□□ -1.07
SDF2-205ENST00000587629 SUPT20HQ8NEM7 779 aa8.37□□□□□ -1.07
SDF2-205ENST00000587629 RUNDC1Q96C34 613 aa8.37□□□□□ -1.07
SDF2-205ENST00000587629 FAM89AQ96GI7 184 aa8.37□□□□□ -1.07
SDF2-205ENST00000587629 WBP1LQ9NX94 342 aa8.37□□□□□ -1.07
SDF2-205ENST00000587629 GPRC5DQ9NZD1 345 aa8.37□□□□□ -1.07
SDF2-205ENST00000587629 ADAMTS8Q9UP79 889 aa8.37□□□□□ -1.07
SDF2-205ENST00000587629 SH3TC1Q8TE82 1336 aa8.36□□□□□ -1.07
SDF2-205ENST00000587629 ADAMTSL1Q8N6G6 1762 aa8.36□□□□□ -1.07
SDF2-205ENST00000587629 SHTN1A0MZ66 631 aa8.36□□□□□ -1.07
SDF2-205ENST00000587629 RIMBP2O15034 1052 aa8.36□□□□□ -1.07
SDF2-205ENST00000587629 GRAPQ13588 217 aa8.36□□□□□ -1.07
SDF2-205ENST00000587629 CST9Q5W186 159 aa8.36□□□□□ -1.07
SDF2-205ENST00000587629 CYP4F22Q6NT55 531 aa8.36□□□□□ -1.07
SDF2-205ENST00000587629 USP50Q70EL3 339 aaPredicted RBP8.36□□□□□ -1.07
SDF2-205ENST00000587629 GRAPLQ8TC17 118 aaPredicted RBP8.36□□□□□ -1.07
SDF2-205ENST00000587629 DCBLD2Q96PD2 775 aa8.36□□□□□ -1.07
SDF2-205ENST00000587629 BCL2L13Q9BXK5 485 aa8.36□□□□□ -1.07
SDF2-205ENST00000587629 RTFDC1Q9BY42 306 aaPredicted RBP8.36□□□□□ -1.07
SDF2-205ENST00000587629 ADARB2Q9NS39 739 aaKnown RBP8.36□□□□□ -1.07
SDF2-205ENST00000587629 SSUH2Q9Y2M2 353 aa8.36□□□□□ -1.07
SDF2-205ENST00000587629 ELL2O00472 640 aaPredicted RBP8.35□□□□□ -1.07
SDF2-205ENST00000587629 KIAA2012Q0VF49 1180 aa8.35□□□□□ -1.07
SDF2-205ENST00000587629 DUSP27Q5VZP5 1158 aa8.35□□□□□ -1.07
SDF2-205ENST00000587629 CIAPIN1Q6FI81 312 aa8.35□□□□□ -1.07
SDF2-205ENST00000587629 ANKRD13DQ6ZTN6 518 aa8.35□□□□□ -1.07
SDF2-205ENST00000587629 PLBD2Q8NHP8 589 aa8.35□□□□□ -1.07
SDF2-205ENST00000587629 CAPNS2Q96L46 248 aa8.35□□□□□ -1.07
SDF2-205ENST00000587629 GLIS2Q9BZE0 524 aaPredicted RBP8.35□□□□□ -1.07
SDF2-205ENST00000587629 VPS33BQ9H267 617 aa8.35□□□□□ -1.07
SDF2-205ENST00000587629 ZNF408Q9H9D4 720 aa8.35□□□□□ -1.07
SDF2-205ENST00000587629 PRDM10Q9NQV6 1147 aa8.35□□□□□ -1.07
SDF2-205ENST00000587629 DBF4Q9UBU7 674 aaPredicted RBP8.35□□□□□ -1.07
SDF2-205ENST00000587629 NSFL1CQ9UNZ2 370 aaKnown RBP8.35□□□□□ -1.07
SDF2-205ENST00000587629 YDJCA8MPS7 323 aa8.34□□□□□ -1.07
SDF2-205ENST00000587629 C6orf229H3BNL8 230 aa8.34□□□□□ -1.07
SDF2-205ENST00000587629 AOC2O75106 756 aa8.34□□□□□ -1.07
SDF2-205ENST00000587629 CELF2O95319 508 aaKnown RBP8.34□□□□□ -1.07
SDF2-205ENST00000587629 HSPA8P11142 646 aaKnown RBP8.34□□□□□ -1.07
SDF2-205ENST00000587629 HIRAP54198 1017 aaPredicted RBP8.34□□□□□ -1.07
SDF2-205ENST00000587629 GPSM2P81274 684 aa8.34□□□□□ -1.07
SDF2-205ENST00000587629 MAP2K1Q02750 393 aaPredicted RBP8.34□□□□□ -1.07
SDF2-205ENST00000587629 TNIP1Q15025 636 aa8.34□□□□□ -1.07
SDF2-205ENST00000587629 DOK7Q18PE1 504 aa8.34□□□□□ -1.07
SDF2-205ENST00000587629 WASHC4Q2M389 1173 aa8.34□□□□□ -1.07
SDF2-205ENST00000587629 DLK2Q6UY11 383 aa8.34□□□□□ -1.07
SDF2-205ENST00000587629 TRPM4Q8TD43 1214 aa8.34□□□□□ -1.07
SDF2-205ENST00000587629 JARID2Q92833 1246 aaPredicted RBP8.34□□□□□ -1.07
SDF2-205ENST00000587629 CELF1Q92879 486 aaKnown RBP8.34□□□□□ -1.07
SDF2-205ENST00000587629 GPR101Q96P66 508 aaPredicted RBP8.34□□□□□ -1.07
SDF2-205ENST00000587629 DBNDD1Q9H9R9 158 aa8.34□□□□□ -1.07
SDF2-205ENST00000587629 KCNQ5Q9NR82 932 aa8.34□□□□□ -1.07
SDF2-205ENST00000587629 MBIPQ9NS73 344 aa8.34□□□□□ -1.07
SDF2-205ENST00000587629 CNOT7Q9UIV1 285 aaKnown RBP8.34□□□□□ -1.07
SDF2-205ENST00000587629 TSKSQ9UJT2 592 aa8.34□□□□□ -1.07
SDF2-205ENST00000587629 H7C1D1 291 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms