RNA–Protein interactions for RNA: ENST00000587235.5

TCF3-210, Transcript of transcription factor 3, human

TSL 5

Gene TCF3, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF3-210	ENST00000587235	GOLGA2	Q08379	1002 aa		32.66	■■■□□ 2.82
TCF3-210	ENST00000587235	DPP8	Q6V1X1	898 aa	Predicted RBP	32.66	■■■□□ 2.82
TCF3-210	ENST00000587235	CREBZF	Q9NS37	354 aa		32.66	■■■□□ 2.82
TCF3-210	ENST00000587235	RTL5	Q5HYW3	569 aa	Predicted RBP	32.65	■■■□□ 2.82
TCF3-210	ENST00000587235	ITGBL1	O95965	494 aa	Predicted RBP	32.64	■■■□□ 2.82
TCF3-210	ENST00000587235	PASK	Q96RG2	1323 aa		32.64	■■■□□ 2.82
TCF3-210	ENST00000587235	LMOD1	P29536	600 aa	Predicted RBP	32.63	■■■□□ 2.81
TCF3-210	ENST00000587235	SF3B3	Q15393	1217 aa	Known RBP	32.63	■■■□□ 2.81
TCF3-210	ENST00000587235	CHMP4A	Q9BY43	222 aa		32.62	■■■□□ 2.81
TCF3-210	ENST00000587235	CCDC30	Q5VVM6	783 aa		32.61	■■■□□ 2.81
TCF3-210	ENST00000587235	TMC4	Q7Z404	712 aa		32.61	■■■□□ 2.81
TCF3-210	ENST00000587235	TSPYL6	Q8N831	410 aa		32.61	■■■□□ 2.81
TCF3-210	ENST00000587235	ZNRF3	Q9ULT6	936 aa		32.61	■■■□□ 2.81
TCF3-210	ENST00000587235	TAF1	P21675	1872 aa		32.61	■■■□□ 2.81
TCF3-210	ENST00000587235	IRS4	O14654	1257 aa	Predicted RBP	32.6	■■■□□ 2.81
TCF3-210	ENST00000587235	EPS15	P42566	896 aa		32.6	■■■□□ 2.81
TCF3-210	ENST00000587235	SCNN1D	P51172	638 aa		32.6	■■■□□ 2.81
TCF3-210	ENST00000587235	CNTROB	Q8N137	903 aa		32.6	■■■□□ 2.81
TCF3-210	ENST00000587235	MAP1S	Q66K74	1059 aa	Predicted RBP	32.59	■■■□□ 2.81
TCF3-210	ENST00000587235	CELF1	Q92879	486 aa	Known RBP	32.59	■■■□□ 2.81
TCF3-210	ENST00000587235	MYD88	Q99836	296 aa		32.59	■■■□□ 2.81
TCF3-210	ENST00000587235	MKRN1	Q9UHC7	482 aa	Known RBP	32.59	■■■□□ 2.81
TCF3-210	ENST00000587235	DDX60	Q8IY21	1712 aa	Known RBP	32.58	■■■□□ 2.81
TCF3-210	ENST00000587235	CXCL9	Q07325	125 aa		32.58	■■■□□ 2.81
TCF3-210	ENST00000587235	KIAA2012	Q0VF49	1180 aa		32.58	■■■□□ 2.81
TCF3-210	ENST00000587235	WWC1	Q8IX03	1113 aa		32.58	■■■□□ 2.81
TCF3-210	ENST00000587235	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	32.58	■■■□□ 2.81
TCF3-210	ENST00000587235	TSR2	Q969E8	191 aa	Known RBP	32.58	■■■□□ 2.81
TCF3-210	ENST00000587235	ADAMTSL1	Q8N6G6	1762 aa		32.56	■■■□□ 2.8
TCF3-210	ENST00000587235	TMEM88B	A6NKF7	163 aa		32.55	■■■□□ 2.8
TCF3-210	ENST00000587235	DDX58	O95786	925 aa	Known RBP	32.55	■■■□□ 2.8
TCF3-210	ENST00000587235	CCDC191	Q8NCU4	936 aa		32.55	■■■□□ 2.8
TCF3-210	ENST00000587235	IL16	Q14005	1332 aa		32.54	■■■□□ 2.8
TCF3-210	ENST00000587235	PCNT	O95613	3336 aa		32.54	■■■□□ 2.8
TCF3-210	ENST00000587235	METTL22	Q9BUU2	404 aa	Predicted RBP	32.54	■■■□□ 2.8
TCF3-210	ENST00000587235	LTBP1	Q14766	1721 aa		32.54	■■■□□ 2.8
TCF3-210	ENST00000587235	NSFL1C	Q9UNZ2	370 aa	Known RBP	32.53	■■■□□ 2.8
TCF3-210	ENST00000587235	HSP90B1	P14625	803 aa	Known RBP	32.52	■■■□□ 2.8
TCF3-210	ENST00000587235	RPS8	P62241	208 aa	Known RBP	32.52	■■■□□ 2.8
TCF3-210	ENST00000587235	CIAPIN1	Q6FI81	312 aa		32.52	■■■□□ 2.8
TCF3-210	ENST00000587235	USP50	Q70EL3	339 aa	Predicted RBP	32.52	■■■□□ 2.8
TCF3-210	ENST00000587235	CWC25	Q9NXE8	425 aa	Predicted RBP	32.52	■■■□□ 2.8
TCF3-210	ENST00000587235	GPRC5D	Q9NZD1	345 aa		32.52	■■■□□ 2.8
TCF3-210	ENST00000587235	RAD17	O75943	681 aa		32.51	■■■□□ 2.79
TCF3-210	ENST00000587235	PCCA	P05165	728 aa	Predicted RBP	32.51	■■■□□ 2.79
TCF3-210	ENST00000587235	HSPA1A	P0DMV8	641 aa	Known RBP	32.51	■■■□□ 2.79
TCF3-210	ENST00000587235	HSPA1B	P0DMV9	641 aa	Known RBP	32.51	■■■□□ 2.79
TCF3-210	ENST00000587235	JARID2	Q92833	1246 aa	Predicted RBP	32.51	■■■□□ 2.79
TCF3-210	ENST00000587235	MAP3K2	Q9Y2U5	619 aa		32.5	■■■□□ 2.79
TCF3-210	ENST00000587235	GMPS	P49915	693 aa	Predicted RBP	32.49	■■■□□ 2.79
TCF3-210	ENST00000587235	TNIP1	Q15025	636 aa		32.49	■■■□□ 2.79
TCF3-210	ENST00000587235	STK31	Q9BXU1	1019 aa		32.49	■■■□□ 2.79
TCF3-210	ENST00000587235	ADARB2	Q9NS39	739 aa	Known RBP	32.49	■■■□□ 2.79
TCF3-210	ENST00000587235	SALL2	Q9Y467	1007 aa	Predicted RBP	32.49	■■■□□ 2.79
TCF3-210	ENST00000587235	CNTNAP1	P78357	1384 aa		32.48	■■■□□ 2.79
TCF3-210	ENST00000587235	GPSM2	P81274	684 aa		32.48	■■■□□ 2.79
TCF3-210	ENST00000587235	WASHC4	Q2M389	1173 aa		32.48	■■■□□ 2.79
TCF3-210	ENST00000587235	TWISTNB	Q3B726	338 aa	Predicted RBP	32.48	■■■□□ 2.79
TCF3-210	ENST00000587235	KSR2	Q6VAB6	950 aa		32.48	■■■□□ 2.79
TCF3-210	ENST00000587235	WDR63	Q8IWG1	891 aa		32.48	■■■□□ 2.79
TCF3-210	ENST00000587235	SEC31B	Q9NQW1	1179 aa		32.48	■■■□□ 2.79
TCF3-210	ENST00000587235	PI4KAP2	A4QPH2	592 aa		32.47	■■■□□ 2.79
TCF3-210	ENST00000587235	YDJC	A8MPS7	323 aa		32.47	■■■□□ 2.79
TCF3-210	ENST00000587235	C6orf229	H3BNL8	230 aa		32.47	■■■□□ 2.79
TCF3-210	ENST00000587235	COL13A1	Q5TAT6	717 aa	Predicted RBP	32.47	■■■□□ 2.79
TCF3-210	ENST00000587235	PI4KAP1	Q8N8J0	262 aa		32.47	■■■□□ 2.79
TCF3-210	ENST00000587235	POLL	Q9UGP5	575 aa		32.47	■■■□□ 2.79
TCF3-210	ENST00000587235	LRRC37A	A6NMS7	1700 aa		32.46	■■■□□ 2.79
TCF3-210	ENST00000587235	DUOX1	Q9NRD9	1551 aa		32.46	■■■□□ 2.79
TCF3-210	ENST00000587235	PDE8A	O60658	829 aa		32.46	■■■□□ 2.79
TCF3-210	ENST00000587235	FAM9B	Q8IZU0	186 aa		32.46	■■■□□ 2.79
TCF3-210	ENST00000587235	BCL2L13	Q9BXK5	485 aa		32.46	■■■□□ 2.79
TCF3-210	ENST00000587235	COL4A1	P02462	1669 aa		32.46	■■■□□ 2.79
TCF3-210	ENST00000587235	RIMBP2	O15034	1052 aa		32.45	■■■□□ 2.79
TCF3-210	ENST00000587235	CCDC152	Q4G0S7	254 aa		32.45	■■■□□ 2.79
TCF3-210	ENST00000587235	SLC4A2	P04920	1241 aa		32.43	■■■□□ 2.78
TCF3-210	ENST00000587235	IGKV5-2	P06315	115 aa		32.43	■■■□□ 2.78
TCF3-210	ENST00000587235	FMR1	Q06787	632 aa	Known RBP eCLIP	32.43	■■■□□ 2.78	4e-6	■□□□□ 9.9
TCF3-210	ENST00000587235	G2E3	Q7L622	706 aa		32.43	■■■□□ 2.78
TCF3-210	ENST00000587235	CCDC85A	Q96PX6	553 aa	Predicted RBP	32.43	■■■□□ 2.78
TCF3-210	ENST00000587235	DBNDD1	Q9H9R9	158 aa		32.43	■■■□□ 2.78
TCF3-210	ENST00000587235	VEGFB	P49765	207 aa		32.42	■■■□□ 2.78
TCF3-210	ENST00000587235	TBC1D16	Q8TBP0	767 aa		32.42	■■■□□ 2.78
TCF3-210	ENST00000587235	EYA3	Q99504	573 aa		32.42	■■■□□ 2.78
TCF3-210	ENST00000587235	NEXN	Q0ZGT2	675 aa		32.41	■■■□□ 2.78
TCF3-210	ENST00000587235	CDHR2	Q9BYE9	1310 aa		32.41	■■■□□ 2.78
TCF3-210	ENST00000587235	DEFB115	Q30KQ5	88 aa		32.4	■■■□□ 2.78
TCF3-210	ENST00000587235	CNOT7	Q9UIV1	285 aa	Known RBP	32.4	■■■□□ 2.78
TCF3-210	ENST00000587235	TRAF5	O00463	557 aa		32.39	■■■□□ 2.78
TCF3-210	ENST00000587235	DOK7	Q18PE1	504 aa		32.39	■■■□□ 2.78
TCF3-210	ENST00000587235	GPR101	Q96P66	508 aa	Predicted RBP	32.39	■■■□□ 2.78
TCF3-210	ENST00000587235	PODXL2	Q9NZ53	605 aa		32.39	■■■□□ 2.78
TCF3-210	ENST00000587235	ABT1	Q9ULW3	272 aa	Known RBP	32.39	■■■□□ 2.78
TCF3-210	ENST00000587235	RASSF10	A6NK89	507 aa		32.38	■■■□□ 2.77
TCF3-210	ENST00000587235	PSMD14	O00487	310 aa		32.38	■■■□□ 2.77
TCF3-210	ENST00000587235	ANKIB1	Q9P2G1	1089 aa		32.38	■■■□□ 2.77
TCF3-210	ENST00000587235	ZBTB12	Q9Y330	459 aa	Predicted RBP	32.38	■■■□□ 2.77
TCF3-210	ENST00000587235	FANCI	Q9NVI1	1328 aa		32.37	■■■□□ 2.77
TCF3-210	ENST00000587235	HIRA	P54198	1017 aa	Predicted RBP	32.37	■■■□□ 2.77
TCF3-210	ENST00000587235	CWF19L2	Q2TBE0	894 aa	Known RBP	32.37	■■■□□ 2.77

Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms