RNA–Protein interactions for RNA: ENST00000587215.1

PKN1-209, Transcript of protein kinase N1, humanhuman

TSL 3

Gene PKN1, Length 363 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-209ENST00000587215 DPP8Q6V1X1 898 aaPredicted RBP21.44■■□□□ 1.02
PKN1-209ENST00000587215 PNMA8AQ86V59 439 aaPredicted RBP21.44■■□□□ 1.02
PKN1-209ENST00000587215 NIM1KQ8IY84 436 aa21.44■■□□□ 1.02
PKN1-209ENST00000587215 SUPT20HQ8NEM7 779 aa21.44■■□□□ 1.02
PKN1-209ENST00000587215 SCNN1DP51172 638 aa21.43■■□□□ 1.02
PKN1-209ENST00000587215 GOLGA2Q08379 1002 aa21.43■■□□□ 1.02
PKN1-209ENST00000587215 WWC1Q8IX03 1113 aa21.43■■□□□ 1.02
PKN1-209ENST00000587215 CELF1Q92879 486 aaKnown RBP21.43■■□□□ 1.02
PKN1-209ENST00000587215 CREBZFQ9NS37 354 aa21.43■■□□□ 1.02
PKN1-209ENST00000587215 IRS4O14654 1257 aaPredicted RBP21.42■■□□□ 1.02
PKN1-209ENST00000587215 CCDC30Q5VVM6 783 aa21.42■■□□□ 1.02
PKN1-209ENST00000587215 TSR2Q969E8 191 aaKnown RBP21.42■■□□□ 1.02
PKN1-209ENST00000587215 MYD88Q99836 296 aa21.42■■□□□ 1.02
PKN1-209ENST00000587215 ZNRF3Q9ULT6 936 aa21.42■■□□□ 1.02
PKN1-209ENST00000587215 TAF1P21675 1872 aa21.41■■□□□ 1.02
PKN1-209ENST00000587215 DDX60Q8IY21 1712 aaKnown RBP21.41■■□□□ 1.02
PKN1-209ENST00000587215 EPS15P42566 896 aa21.41■■□□□ 1.02
PKN1-209ENST00000587215 CXCL9Q07325 125 aa21.41■■□□□ 1.02
PKN1-209ENST00000587215 TMC4Q7Z404 712 aa21.41■■□□□ 1.02
PKN1-209ENST00000587215 KIAA2012Q0VF49 1180 aa21.4■■□□□ 1.02
PKN1-209ENST00000587215 MAP1SQ66K74 1059 aaPredicted RBP21.4■■□□□ 1.02
PKN1-209ENST00000587215 CNTROBQ8N137 903 aa21.4■■□□□ 1.02
PKN1-209ENST00000587215 ZBTB38Q8NAP3 1195 aaPredicted RBP21.4■■□□□ 1.02
PKN1-209ENST00000587215 CHMP4AQ9BY43 222 aa21.4■■□□□ 1.02
PKN1-209ENST00000587215 MRS2Q9HD23 443 aa21.4■■□□□ 1.02
PKN1-209ENST00000587215 ADAMTSL1Q8N6G6 1762 aa21.4■■□□□ 1.02
PKN1-209ENST00000587215 LTBP1Q14766 1721 aa21.39■■□□□ 1.01
PKN1-209ENST00000587215 NCBP3Q53F19 620 aaKnown RBP21.39■■□□□ 1.01
PKN1-209ENST00000587215 METTL22Q9BUU2 404 aaPredicted RBP21.39■■□□□ 1.01
PKN1-209ENST00000587215 ANP32CO43423 234 aa21.38■■□□□ 1.01
PKN1-209ENST00000587215 LMOD1P29536 600 aaPredicted RBP21.38■■□□□ 1.01
PKN1-209ENST00000587215 CCDC191Q8NCU4 936 aa21.38■■□□□ 1.01
PKN1-209ENST00000587215 JARID2Q92833 1246 aaPredicted RBP21.38■■□□□ 1.01
PKN1-209ENST00000587215 MKRN1Q9UHC7 482 aaKnown RBP21.37■■□□□ 1.01
PKN1-209ENST00000587215 NSFL1CQ9UNZ2 370 aaKnown RBP21.37■■□□□ 1.01
PKN1-209ENST00000587215 MAP3K2Q9Y2U5 619 aa21.37■■□□□ 1.01
PKN1-209ENST00000587215 TMEM88BA6NKF7 163 aa21.36■■□□□ 1.01
PKN1-209ENST00000587215 DDX58O95786 925 aaKnown RBP21.36■■□□□ 1.01
PKN1-209ENST00000587215 PCCAP05165 728 aaPredicted RBP21.36■■□□□ 1.01
PKN1-209ENST00000587215 RPS8P62241 208 aaKnown RBP21.36■■□□□ 1.01
PKN1-209ENST00000587215 USP50Q70EL3 339 aaPredicted RBP21.36■■□□□ 1.01
PKN1-209ENST00000587215 CWC25Q9NXE8 425 aaPredicted RBP21.36■■□□□ 1.01
PKN1-209ENST00000587215 COL4A1P02462 1669 aa21.36■■□□□ 1.01
PKN1-209ENST00000587215 IL16Q14005 1332 aa21.35■■□□□ 1.01
PKN1-209ENST00000587215 YDJCA8MPS7 323 aa21.35■■□□□ 1.01
PKN1-209ENST00000587215 GPSM2P81274 684 aa21.35■■□□□ 1.01
PKN1-209ENST00000587215 TWISTNBQ3B726 338 aaPredicted RBP21.35■■□□□ 1.01
PKN1-209ENST00000587215 CIAPIN1Q6FI81 312 aa21.35■■□□□ 1.01
PKN1-209ENST00000587215 KSR2Q6VAB6 950 aa21.35■■□□□ 1.01
PKN1-209ENST00000587215 SEC31BQ9NQW1 1179 aa21.35■■□□□ 1.01
PKN1-209ENST00000587215 GPRC5DQ9NZD1 345 aa21.35■■□□□ 1.01
PKN1-209ENST00000587215 POLLQ9UGP5 575 aa21.35■■□□□ 1.01
PKN1-209ENST00000587215 PI4KAP2A4QPH2 592 aa21.34■■□□□ 1.01
PKN1-209ENST00000587215 RAD17O75943 681 aa21.34■■□□□ 1.01
PKN1-209ENST00000587215 IGKV5-2P06315 115 aa21.34■■□□□ 1.01
PKN1-209ENST00000587215 GMPSP49915 693 aaPredicted RBP21.34■■□□□ 1.01
PKN1-209ENST00000587215 G2E3Q7L622 706 aa21.34■■□□□ 1.01
PKN1-209ENST00000587215 PI4KAP1Q8N8J0 262 aa21.34■■□□□ 1.01
PKN1-209ENST00000587215 DUOX1Q9NRD9 1551 aa21.34■■□□□ 1.01
PKN1-209ENST00000587215 PDE8AO60658 829 aa21.33■■□□□ 1.01
PKN1-209ENST00000587215 HSP90B1P14625 803 aaKnown RBP21.33■■□□□ 1.01
PKN1-209ENST00000587215 WASHC4Q2M389 1173 aa21.33■■□□□ 1.01
PKN1-209ENST00000587215 COL13A1Q5TAT6 717 aaPredicted RBP21.33■■□□□ 1.01
PKN1-209ENST00000587215 ADARB2Q9NS39 739 aaKnown RBP21.33■■□□□ 1.01
PKN1-209ENST00000587215 SALL2Q9Y467 1007 aaPredicted RBP21.33■■□□□ 1.01
PKN1-209ENST00000587215 LRRC37AA6NMS7 1700 aa21.32■■□□□ 1
PKN1-209ENST00000587215 RIMBP2O15034 1052 aa21.32■■□□□ 1
PKN1-209ENST00000587215 SLC4A2P04920 1241 aa21.32■■□□□ 1
PKN1-209ENST00000587215 HSPA1AP0DMV8 641 aaKnown RBP21.32■■□□□ 1
PKN1-209ENST00000587215 HSPA1BP0DMV9 641 aaKnown RBP21.32■■□□□ 1
PKN1-209ENST00000587215 FMR1Q06787 632 aaKnown RBP eCLIP21.32■■□□□ 12e-6■□□□□ 9.3
PKN1-209ENST00000587215 TNIP1Q15025 636 aa21.32■■□□□ 1
PKN1-209ENST00000587215 STK31Q9BXU1 1019 aa21.32■■□□□ 1
PKN1-209ENST00000587215 CNTNAP1P78357 1384 aa21.32■■□□□ 1
PKN1-209ENST00000587215 C6orf229H3BNL8 230 aa21.31■■□□□ 1
PKN1-209ENST00000587215 WDR63Q8IWG1 891 aa21.31■■□□□ 1
PKN1-209ENST00000587215 TBC1D16Q8TBP0 767 aa21.31■■□□□ 1
PKN1-209ENST00000587215 VEGFBP49765 207 aa21.3■■□□□ 1
PKN1-209ENST00000587215 CCDC152Q4G0S7 254 aa21.3■■□□□ 1
PKN1-209ENST00000587215 CCDC85AQ96PX6 553 aaPredicted RBP21.3■■□□□ 1
PKN1-209ENST00000587215 HIRAP54198 1017 aaPredicted RBP21.29■■□□□ 1
PKN1-209ENST00000587215 GPR101Q96P66 508 aaPredicted RBP21.29■■□□□ 1
PKN1-209ENST00000587215 BCL2L13Q9BXK5 485 aa21.29■■□□□ 1
PKN1-209ENST00000587215 DBNDD1Q9H9R9 158 aa21.29■■□□□ 1
PKN1-209ENST00000587215 KCNQ5Q9NR82 932 aa21.29■■□□□ 1
PKN1-209ENST00000587215 PODXL2Q9NZ53 605 aa21.29■■□□□ 1
PKN1-209ENST00000587215 PGAP2Q9UHJ9 254 aa21.29■■□□□ 1
PKN1-209ENST00000587215 CDHR2Q9BYE9 1310 aa21.29■■□□□ 1
PKN1-209ENST00000587215 FANCIQ9NVI1 1328 aa21.29■■□□□ 1
PKN1-209ENST00000587215 VAMP4O75379 141 aa21.28■■□□□ 1
PKN1-209ENST00000587215 DOK7Q18PE1 504 aa21.28■■□□□ 1
PKN1-209ENST00000587215 CWF19L2Q2TBE0 894 aaKnown RBP21.28■■□□□ 1
PKN1-209ENST00000587215 CNOT7Q9UIV1 285 aaKnown RBP21.28■■□□□ 1
PKN1-209ENST00000587215 SHTN1A0MZ66 631 aa21.27■■□□□ 1
PKN1-209ENST00000587215 RASSF10A6NK89 507 aa21.27■■□□□ 1
PKN1-209ENST00000587215 NEURL1BA8MQ27 555 aa21.27■■□□□ 1
PKN1-209ENST00000587215 TRAF5O00463 557 aa21.27■■□□□ 1
PKN1-209ENST00000587215 PSMD14O00487 310 aa21.27■■□□□ 1
PKN1-209ENST00000587215 DEFB115Q30KQ5 88 aa21.27■■□□□ 1
PKN1-209ENST00000587215 EYA3Q99504 573 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms