RNA–Protein interactions for RNA: ENST00000586985.1

SMARCA4-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 534 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-212ENST00000586985 LTBP3Q9NS15 1303 aa18.38■□□□□ 0.53
SMARCA4-212ENST00000586985 COL11A2P13942 1736 aaPredicted RBP18.37■□□□□ 0.53
SMARCA4-212ENST00000586985 DLEC1Q9Y238 1755 aa18.37■□□□□ 0.53
SMARCA4-212ENST00000586985 BRPF1P55201 1214 aaPredicted RBP18.37■□□□□ 0.53
SMARCA4-212ENST00000586985 ZNF526Q8TF50 670 aaPredicted RBP18.37■□□□□ 0.53
SMARCA4-212ENST00000586985 CELF1Q92879 486 aaKnown RBP18.37■□□□□ 0.53
SMARCA4-212ENST00000586985 TNRC6CQ9HCJ0 1690 aaKnown RBP18.37■□□□□ 0.53
SMARCA4-212ENST00000586985 GRM8O00222 908 aa18.36■□□□□ 0.53
SMARCA4-212ENST00000586985 PRELPP51888 382 aa18.36■□□□□ 0.53
SMARCA4-212ENST00000586985 CTSWP56202 376 aa18.36■□□□□ 0.53
SMARCA4-212ENST00000586985 TTLL11Q8NHH1 800 aa18.36■□□□□ 0.53
SMARCA4-212ENST00000586985 API5Q9BZZ5 524 aaKnown RBP18.36■□□□□ 0.53
SMARCA4-212ENST00000586985 GPBP1L1Q9HC44 474 aaPredicted RBP18.36■□□□□ 0.53
SMARCA4-212ENST00000586985 ARFGEF1Q9Y6D6 1849 aa18.36■□□□□ 0.53
SMARCA4-212ENST00000586985 SLX4Q8IY92 1834 aa18.35■□□□□ 0.53
SMARCA4-212ENST00000586985 CASP7P55210 303 aa18.35■□□□□ 0.53
SMARCA4-212ENST00000586985 MPNDQ8N594 471 aa18.35■□□□□ 0.53
SMARCA4-212ENST00000586985 PSMD1Q99460 953 aa18.35■□□□□ 0.53
SMARCA4-212ENST00000586985 PLA2G12BQ9BX93 195 aa18.35■□□□□ 0.53
SMARCA4-212ENST00000586985 SEC31BQ9NQW1 1179 aa18.35■□□□□ 0.53
SMARCA4-212ENST00000586985 IPO8O15397 1037 aaKnown RBP18.34■□□□□ 0.53
SMARCA4-212ENST00000586985 DPP8Q6V1X1 898 aaPredicted RBP18.34■□□□□ 0.53
SMARCA4-212ENST00000586985 SUPT20HQ8NEM7 779 aa18.34■□□□□ 0.53
SMARCA4-212ENST00000586985 ZNF277Q9NRM2 450 aaPredicted RBP18.34■□□□□ 0.53
SMARCA4-212ENST00000586985 CHD4Q14839 1912 aa18.33■□□□□ 0.53
SMARCA4-212ENST00000586985 KIF16BQ96L93 1317 aa18.33■□□□□ 0.53
SMARCA4-212ENST00000586985 ZC3H4Q9UPT8 1303 aaKnown RBP18.33■□□□□ 0.53
SMARCA4-212ENST00000586985 DPY19L2Q6NUT2 758 aa18.33■□□□□ 0.52
SMARCA4-212ENST00000586985 ANKRD18AQ8IVF6 992 aa18.33■□□□□ 0.52
SMARCA4-212ENST00000586985 ARHGAP45Q92619 1136 aa18.33■□□□□ 0.52
SMARCA4-212ENST00000586985 CDC5LQ99459 802 aaKnown RBP18.33■□□□□ 0.52
SMARCA4-212ENST00000586985 NSFL1CQ9UNZ2 370 aaKnown RBP18.33■□□□□ 0.52
SMARCA4-212ENST00000586985 IARSP41252 1262 aaKnown RBP18.32■□□□□ 0.52
SMARCA4-212ENST00000586985 CCT4P50991 539 aaKnown RBP18.32■□□□□ 0.52
SMARCA4-212ENST00000586985 JDP2Q8WYK2 163 aa18.32■□□□□ 0.52
SMARCA4-212ENST00000586985 FRAT1Q92837 279 aaPredicted RBP18.32■□□□□ 0.52
SMARCA4-212ENST00000586985 GREM2Q9H772 168 aa18.32■□□□□ 0.52
SMARCA4-212ENST00000586985 KDM2BQ8NHM5 1336 aa18.31■□□□□ 0.52
SMARCA4-212ENST00000586985 BCAR3O75815 825 aa18.31■□□□□ 0.52
SMARCA4-212ENST00000586985 CSF1RP07333 972 aa18.31■□□□□ 0.52
SMARCA4-212ENST00000586985 CHMP3Q9Y3E7 222 aa18.31■□□□□ 0.52
SMARCA4-212ENST00000586985 CACNA1FO60840 1977 aa18.3■□□□□ 0.52
SMARCA4-212ENST00000586985 FOXO4P98177 505 aa18.3■□□□□ 0.52
SMARCA4-212ENST00000586985 LARGE2Q8N3Y3 721 aa18.3■□□□□ 0.52
SMARCA4-212ENST00000586985 VPS33BQ9H267 617 aa18.3■□□□□ 0.52
SMARCA4-212ENST00000586985 ANKRD18BA2A2Z9 1011 aa18.29■□□□□ 0.52
SMARCA4-212ENST00000586985 GLTPD2A6NH11 291 aa18.29■□□□□ 0.52
SMARCA4-212ENST00000586985 NBPF7P0C2Y1 421 aaPredicted RBP18.29■□□□□ 0.52
SMARCA4-212ENST00000586985 ITGA6P23229 1130 aa18.29■□□□□ 0.52
SMARCA4-212ENST00000586985 IGHMBP2P38935 993 aaKnown RBP18.29■□□□□ 0.52
SMARCA4-212ENST00000586985 LMBR1LQ6UX01 489 aa18.29■□□□□ 0.52
SMARCA4-212ENST00000586985 SLC51AQ86UW1 340 aa18.29■□□□□ 0.52
SMARCA4-212ENST00000586985 RTFDC1Q9BY42 306 aaPredicted RBP18.29■□□□□ 0.52
SMARCA4-212ENST00000586985 C6orf229H3BNL8 230 aa18.28■□□□□ 0.52
SMARCA4-212ENST00000586985 PPIP5K2O43314 1243 aa18.28■□□□□ 0.52
SMARCA4-212ENST00000586985 GPSM2P81274 684 aa18.28■□□□□ 0.52
SMARCA4-212ENST00000586985 IFIT5Q13325 482 aaKnown RBP18.28■□□□□ 0.52
SMARCA4-212ENST00000586985 MPHOSPH8Q99549 860 aa18.28■□□□□ 0.52
SMARCA4-212ENST00000586985 USP44Q9H0E7 712 aa18.28■□□□□ 0.52
SMARCA4-212ENST00000586985 ANKIB1Q9P2G1 1089 aa18.28■□□□□ 0.52
SMARCA4-212ENST00000586985 RTL9Q8NET4 1388 aa18.28■□□□□ 0.52
SMARCA4-212ENST00000586985 UTYO14607 1347 aa18.27■□□□□ 0.52
SMARCA4-212ENST00000586985 DDX60Q8IY21 1712 aaKnown RBP18.27■□□□□ 0.52
SMARCA4-212ENST00000586985 FAM161AQ3B820 660 aa18.27■□□□□ 0.52
SMARCA4-212ENST00000586985 BSDC1Q9NW68 430 aaPredicted RBP18.27■□□□□ 0.52
SMARCA4-212ENST00000586985 EIF6P56537 245 aaKnown RBP18.26■□□□□ 0.51
SMARCA4-212ENST00000586985 CCDC57Q2TAC2 916 aa18.26■□□□□ 0.51
SMARCA4-212ENST00000586985 EPHA10Q5JZY3 1008 aa18.26■□□□□ 0.51
SMARCA4-212ENST00000586985 ZKSCAN2Q63HK3 967 aa18.26■□□□□ 0.51
SMARCA4-212ENST00000586985 ATF7IPQ6VMQ6 1270 aa18.26■□□□□ 0.51
SMARCA4-212ENST00000586985 NIM1KQ8IY84 436 aa18.26■□□□□ 0.51
SMARCA4-212ENST00000586985 SUCLG2Q96I99 432 aa18.26■□□□□ 0.51
SMARCA4-212ENST00000586985 EYA3Q99504 573 aa18.26■□□□□ 0.51
SMARCA4-212ENST00000586985 RRAGCQ9HB90 399 aa18.26■□□□□ 0.51
SMARCA4-212ENST00000586985 HDAC5Q9UQL6 1122 aa18.26■□□□□ 0.51
SMARCA4-212ENST00000586985 SNED1Q8TER0 1413 aa18.25■□□□□ 0.51
SMARCA4-212ENST00000586985 AOC3Q16853 763 aa18.25■□□□□ 0.51
SMARCA4-212ENST00000586985 WASHC4Q2M389 1173 aa18.25■□□□□ 0.51
SMARCA4-212ENST00000586985 TAF7LQ5H9L4 462 aa18.25■□□□□ 0.51
SMARCA4-212ENST00000586985 FZD9O00144 591 aa18.24■□□□□ 0.51
SMARCA4-212ENST00000586985 RIMBP2O15034 1052 aa18.24■□□□□ 0.51
SMARCA4-212ENST00000586985 TRIM27P14373 513 aa18.24■□□□□ 0.51
SMARCA4-212ENST00000586985 KIAA2012Q0VF49 1180 aa18.24■□□□□ 0.51
SMARCA4-212ENST00000586985 INTS3Q68E01 1043 aaKnown RBP18.24■□□□□ 0.51
SMARCA4-212ENST00000586985 TBC1D16Q8TBP0 767 aa18.24■□□□□ 0.51
SMARCA4-212ENST00000586985 ZC3H12CQ9C0D7 883 aaKnown RBP18.24■□□□□ 0.51
SMARCA4-212ENST00000586985 NMRK2Q9NPI5 230 aa18.24■□□□□ 0.51
SMARCA4-212ENST00000586985 PODXL2Q9NZ53 605 aa18.24■□□□□ 0.51
SMARCA4-212ENST00000586985 POLLQ9UGP5 575 aa18.24■□□□□ 0.51
SMARCA4-212ENST00000586985 GGA1Q9UJY5 639 aa18.24■□□□□ 0.51
SMARCA4-212ENST00000586985 MINPP1Q9UNW1 487 aa18.24■□□□□ 0.51
SMARCA4-212ENST00000586985 CACNA1SQ13698 1873 aa18.24■□□□□ 0.51
SMARCA4-212ENST00000586985 FER1L6Q2WGJ9 1857 aa18.23■□□□□ 0.51
SMARCA4-212ENST00000586985 LAMB2P55268 1798 aa18.23■□□□□ 0.51
SMARCA4-212ENST00000586985 G3V3G9 751 aa18.23■□□□□ 0.51
SMARCA4-212ENST00000586985 DDNO94850 711 aaPredicted RBP18.23■□□□□ 0.51
SMARCA4-212ENST00000586985 UBTFL1P0CB47 393 aaPredicted RBP18.23■□□□□ 0.51
SMARCA4-212ENST00000586985 ATP2B4P23634 1241 aa18.23■□□□□ 0.51
SMARCA4-212ENST00000586985 DCAF8Q5TAQ9 597 aa18.23■□□□□ 0.51
SMARCA4-212ENST00000586985 CLUAP1Q96AJ1 413 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms