RNA–Protein interactions for RNA: ENST00000586856.1

ERCC2-209, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-209ENST00000586856 BBOX1O75936 387 aa30.66■■■□□ 2.5
ERCC2-209ENST00000586856 LINS1Q8NG48 757 aa30.66■■■□□ 2.5
ERCC2-209ENST00000586856 PSMD1Q99460 953 aa30.66■■■□□ 2.5
ERCC2-209ENST00000586856 KDM2BQ8NHM5 1336 aa30.66■■■□□ 2.5
ERCC2-209ENST00000586856 GRIPAP1Q4V328 841 aa30.65■■■□□ 2.5
ERCC2-209ENST00000586856 NMRK2Q9NPI5 230 aa30.65■■■□□ 2.5
ERCC2-209ENST00000586856 PDE8AO60658 829 aa30.64■■■□□ 2.5
ERCC2-209ENST00000586856 GCKRQ14397 625 aa30.64■■■□□ 2.5
ERCC2-209ENST00000586856 MRPL50Q8N5N7 158 aaKnown RBP30.64■■■□□ 2.5
ERCC2-209ENST00000586856 TMX4Q9H1E5 349 aaPredicted RBP30.64■■■□□ 2.5
ERCC2-209ENST00000586856 UBE3BQ7Z3V4 1068 aa30.63■■■□□ 2.49
ERCC2-209ENST00000586856 SSH1Q8WYL5 1049 aa30.63■■■□□ 2.49
ERCC2-209ENST00000586856 CELF1Q92879 486 aaKnown RBP30.63■■■□□ 2.49
ERCC2-209ENST00000586856 KIF3CO14782 793 aa30.62■■■□□ 2.49
ERCC2-209ENST00000586856 IARSP41252 1262 aaKnown RBP30.62■■■□□ 2.49
ERCC2-209ENST00000586856 HNRNPUQ00839 825 aaKnown RBP eCLIP30.62■■■□□ 2.49
ERCC2-209ENST00000586856 SP8Q8IXZ3 490 aa30.62■■■□□ 2.49
ERCC2-209ENST00000586856 H7C1W4 665 aa30.61■■■□□ 2.49
ERCC2-209ENST00000586856 CCDC152Q4G0S7 254 aa30.61■■■□□ 2.49
ERCC2-209ENST00000586856 BEND3Q5T5X7 828 aa30.61■■■□□ 2.49
ERCC2-209ENST00000586856 TMC4Q7Z404 712 aa30.61■■■□□ 2.49
ERCC2-209ENST00000586856 GLTPD2A6NH11 291 aa30.6■■■□□ 2.49
ERCC2-209ENST00000586856 COL4A5P29400 1685 aa30.6■■■□□ 2.49
ERCC2-209ENST00000586856 BCL2L13Q9BXK5 485 aa30.6■■■□□ 2.49
ERCC2-209ENST00000586856 DUOX1Q9NRD9 1551 aa30.59■■■□□ 2.49
ERCC2-209ENST00000586856 CTSWP56202 376 aa30.59■■■□□ 2.49
ERCC2-209ENST00000586856 CCDC85AQ96PX6 553 aaPredicted RBP30.59■■■□□ 2.49
ERCC2-209ENST00000586856 CT47B1P0C2W7 299 aaPredicted RBP30.58■■■□□ 2.49
ERCC2-209ENST00000586856 SEC31BQ9NQW1 1179 aa30.58■■■□□ 2.49
ERCC2-209ENST00000586856 WDR90Q96KV7 1748 aa30.58■■■□□ 2.49
ERCC2-209ENST00000586856 LTBP1Q14766 1721 aa30.57■■■□□ 2.48
ERCC2-209ENST00000586856 CASP7P55210 303 aa30.57■■■□□ 2.48
ERCC2-209ENST00000586856 C1QTNF8P60827 252 aa30.57■■■□□ 2.48
ERCC2-209ENST00000586856 ALDH1L2Q3SY69 923 aa30.57■■■□□ 2.48
ERCC2-209ENST00000586856 SPEF2Q9C093 1822 aa30.57■■■□□ 2.48
ERCC2-209ENST00000586856 PTPRCP08575 1304 aa30.56■■■□□ 2.48
ERCC2-209ENST00000586856 SLC4A10Q6U841 1118 aa30.56■■■□□ 2.48
ERCC2-209ENST00000586856 DPP8Q6V1X1 898 aaPredicted RBP30.56■■■□□ 2.48
ERCC2-209ENST00000586856 SMC4Q9NTJ3 1288 aa30.56■■■□□ 2.48
ERCC2-209ENST00000586856 RPS8P62241 208 aaKnown RBP30.55■■■□□ 2.48
ERCC2-209ENST00000586856 MPNDQ8N594 471 aa30.55■■■□□ 2.48
ERCC2-209ENST00000586856 RTFDC1Q9BY42 306 aaPredicted RBP30.55■■■□□ 2.48
ERCC2-209ENST00000586856 DPY19L2Q6NUT2 758 aa30.54■■■□□ 2.48
ERCC2-209ENST00000586856 TTLL11Q8NHH1 800 aa30.54■■■□□ 2.48
ERCC2-209ENST00000586856 PLA2G12BQ9BX93 195 aa30.54■■■□□ 2.48
ERCC2-209ENST00000586856 RTL9Q8NET4 1388 aa30.54■■■□□ 2.48
ERCC2-209ENST00000586856 ZNF541Q9H0D2 1346 aa30.53■■■□□ 2.48
ERCC2-209ENST00000586856 LARGE2Q8N3Y3 721 aa30.53■■■□□ 2.48
ERCC2-209ENST00000586856 SUPT20HQ8NEM7 779 aa30.53■■■□□ 2.48
ERCC2-209ENST00000586856 RRAGCQ9HB90 399 aa30.53■■■□□ 2.48
ERCC2-209ENST00000586856 ALDH1L1O75891 902 aa30.52■■■□□ 2.48
ERCC2-209ENST00000586856 JDP2Q8WYK2 163 aa30.52■■■□□ 2.48
ERCC2-209ENST00000586856 SRCIN1Q9C0H9 1055 aa30.52■■■□□ 2.48
ERCC2-209ENST00000586856 PPIP5K2O43314 1243 aa30.51■■■□□ 2.47
ERCC2-209ENST00000586856 GREM2Q9H772 168 aa30.51■■■□□ 2.47
ERCC2-209ENST00000586856 AOC3Q16853 763 aa30.5■■■□□ 2.47
ERCC2-209ENST00000586856 FZD9O00144 591 aa30.49■■■□□ 2.47
ERCC2-209ENST00000586856 GRM8O00222 908 aa30.49■■■□□ 2.47
ERCC2-209ENST00000586856 DDNO94850 711 aaPredicted RBP30.49■■■□□ 2.47
ERCC2-209ENST00000586856 ANKRD18AQ8IVF6 992 aa30.49■■■□□ 2.47
ERCC2-209ENST00000586856 GPSM2P81274 684 aa30.48■■■□□ 2.47
ERCC2-209ENST00000586856 NIM1KQ8IY84 436 aa30.48■■■□□ 2.47
ERCC2-209ENST00000586856 CDC5LQ99459 802 aaKnown RBP30.48■■■□□ 2.47
ERCC2-209ENST00000586856 VPS33BQ9H267 617 aa30.48■■■□□ 2.47
ERCC2-209ENST00000586856 NSFL1CQ9UNZ2 370 aaKnown RBP30.48■■■□□ 2.47
ERCC2-209ENST00000586856 FAM161AQ3B820 660 aa30.47■■■□□ 2.47
ERCC2-209ENST00000586856 ZBED9Q6R2W3 1325 aa30.47■■■□□ 2.47
ERCC2-209ENST00000586856 TOMM70O94826 608 aa30.46■■■□□ 2.47
ERCC2-209ENST00000586856 VEGFAP15692 232 aaPredicted RBP30.46■■■□□ 2.47
ERCC2-209ENST00000586856 C16orf71Q8IYS4 520 aaPredicted RBP30.46■■■□□ 2.47
ERCC2-209ENST00000586856 C9orf78Q9NZ63 289 aaPredicted RBP30.46■■■□□ 2.47
ERCC2-209ENST00000586856 RARSP54136 660 aaKnown RBP30.45■■■□□ 2.47
ERCC2-209ENST00000586856 KIAA2012Q0VF49 1180 aa30.45■■■□□ 2.47
ERCC2-209ENST00000586856 SCN4AP35499 1836 aa30.45■■■□□ 2.46
ERCC2-209ENST00000586856 POTECB2RU33 542 aa30.44■■■□□ 2.46
ERCC2-209ENST00000586856 CSF1RP07333 972 aa30.44■■■□□ 2.46
ERCC2-209ENST00000586856 BRPF1P55201 1214 aaPredicted RBP30.43■■■□□ 2.46
ERCC2-209ENST00000586856 EIF6P56537 245 aaKnown RBP30.43■■■□□ 2.46
ERCC2-209ENST00000586856 FOXO4P98177 505 aa30.43■■■□□ 2.46
ERCC2-209ENST00000586856 L3MBTL3Q96JM7 780 aaPredicted RBP30.43■■■□□ 2.46
ERCC2-209ENST00000586856 ITGA6P23229 1130 aa30.42■■■□□ 2.46
ERCC2-209ENST00000586856 POLLQ9UGP5 575 aa30.42■■■□□ 2.46
ERCC2-209ENST00000586856 C6orf229H3BNL8 230 aa30.41■■■□□ 2.46
ERCC2-209ENST00000586856 TBC1D16Q8TBP0 767 aa30.41■■■□□ 2.46
ERCC2-209ENST00000586856 RBM46Q8TBY0 533 aaKnown RBP30.41■■■□□ 2.46
ERCC2-209ENST00000586856 PODXL2Q9NZ53 605 aa30.41■■■□□ 2.46
ERCC2-209ENST00000586856 ANKIB1Q9P2G1 1089 aa30.41■■■□□ 2.46
ERCC2-209ENST00000586856 NOB1Q9ULX3 412 aaKnown RBP30.41■■■□□ 2.46
ERCC2-209ENST00000586856 EPHA10Q5JZY3 1008 aa30.4■■■□□ 2.46
ERCC2-209ENST00000586856 GPC2Q8N158 579 aa30.4■■■□□ 2.46
ERCC2-209ENST00000586856 BSDC1Q9NW68 430 aaPredicted RBP30.4■■■□□ 2.46
ERCC2-209ENST00000586856 UTYO14607 1347 aa30.4■■■□□ 2.46
ERCC2-209ENST00000586856 UFL1O94874 794 aa30.39■■■□□ 2.46
ERCC2-209ENST00000586856 NBPF7P0C2Y1 421 aaPredicted RBP30.39■■■□□ 2.46
ERCC2-209ENST00000586856 IGHMBP2P38935 993 aaKnown RBP30.39■■■□□ 2.46
ERCC2-209ENST00000586856 ZNRF3Q9ULT6 936 aa30.39■■■□□ 2.46
ERCC2-209ENST00000586856 CHMP3Q9Y3E7 222 aa30.39■■■□□ 2.46
ERCC2-209ENST00000586856 XDHP47989 1333 aa30.39■■■□□ 2.46
ERCC2-209ENST00000586856 KIF16BQ96L93 1317 aa30.39■■■□□ 2.46
ERCC2-209ENST00000586856 WASHC4Q2M389 1173 aa30.38■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms