RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 PA2G4Q9UQ80 394 aaKnown RBP12.59□□□□□ -0.39
APOC1-201ENST00000586638 HDAC5Q9UQL6 1122 aa12.59□□□□□ -0.39
APOC1-201ENST00000586638 AK9Q5TCS8 1911 aa12.58□□□□□ -0.39
APOC1-201ENST00000586638 SURF6O75683 361 aaKnown RBP12.58□□□□□ -0.4
APOC1-201ENST00000586638 EIF5P55010 431 aaKnown RBP12.58□□□□□ -0.4
APOC1-201ENST00000586638 RTL5Q5HYW3 569 aaPredicted RBP12.58□□□□□ -0.4
APOC1-201ENST00000586638 GIGYF2Q6Y7W6 1299 aaKnown RBP12.58□□□□□ -0.4
APOC1-201ENST00000586638 C10orf71Q711Q0 1435 aa12.58□□□□□ -0.4
APOC1-201ENST00000586638 PLEKHM2Q8IWE5 1019 aa12.58□□□□□ -0.4
APOC1-201ENST00000586638 CCDC191Q8NCU4 936 aa12.58□□□□□ -0.4
APOC1-201ENST00000586638 LRRCC1Q9C099 1032 aa12.58□□□□□ -0.4
APOC1-201ENST00000586638 SRP68Q9UHB9 627 aaKnown RBP12.58□□□□□ -0.4
APOC1-201ENST00000586638 DDX60Q8IY21 1712 aaKnown RBP12.57□□□□□ -0.4
APOC1-201ENST00000586638 H7C1W4 665 aa12.57□□□□□ -0.4
APOC1-201ENST00000586638 GPTP24298 496 aa12.57□□□□□ -0.4
APOC1-201ENST00000586638 FSTL1Q12841 308 aa12.57□□□□□ -0.4
APOC1-201ENST00000586638 OS9Q13438 667 aaPredicted RBP12.57□□□□□ -0.4
APOC1-201ENST00000586638 RRAGCQ9HB90 399 aa12.57□□□□□ -0.4
APOC1-201ENST00000586638 PCNTO95613 3336 aa12.56□□□□□ -0.4
APOC1-201ENST00000586638 GSPT1P15170 499 aaKnown RBP12.56□□□□□ -0.4
APOC1-201ENST00000586638 NPM2Q86SE8 214 aaKnown RBP12.56□□□□□ -0.4
APOC1-201ENST00000586638 IL1RAPL2Q9NP60 686 aa12.56□□□□□ -0.4
APOC1-201ENST00000586638 RNF181Q9P0P0 153 aa12.56□□□□□ -0.4
APOC1-201ENST00000586638 UBN2Q6ZU65 1347 aa12.56□□□□□ -0.4
APOC1-201ENST00000586638 SALL3Q9BXA9 1300 aa12.56□□□□□ -0.4
APOC1-201ENST00000586638 SPEF2Q9C093 1822 aa12.55□□□□□ -0.4
APOC1-201ENST00000586638 RAB11FIP3O75154 756 aa12.55□□□□□ -0.4
APOC1-201ENST00000586638 ZPR1O75312 459 aa12.55□□□□□ -0.4
APOC1-201ENST00000586638 CAMTA2O94983 1202 aa12.55□□□□□ -0.4
APOC1-201ENST00000586638 TM4SF1P30408 202 aa12.55□□□□□ -0.4
APOC1-201ENST00000586638 CHRNA5P30532 468 aa12.55□□□□□ -0.4
APOC1-201ENST00000586638 DDR1Q08345 913 aa12.55□□□□□ -0.4
APOC1-201ENST00000586638 RABL6Q3YEC7 729 aaPredicted RBP12.55□□□□□ -0.4
APOC1-201ENST00000586638 HSP90AB3PQ58FF7 597 aa12.55□□□□□ -0.4
APOC1-201ENST00000586638 BMP2KLQ5H9B9 411 aa12.55□□□□□ -0.4
APOC1-201ENST00000586638 TTC22Q5TAA0 569 aa12.55□□□□□ -0.4
APOC1-201ENST00000586638 KLHDC4Q8TBB5 520 aa12.55□□□□□ -0.4
APOC1-201ENST00000586638 RHPN1Q8TCX5 695 aa12.55□□□□□ -0.4
APOC1-201ENST00000586638 NOP58Q9Y2X3 529 aaKnown RBP12.55□□□□□ -0.4
APOC1-201ENST00000586638 CHMP3Q9Y3E7 222 aa12.55□□□□□ -0.4
APOC1-201ENST00000586638 ERVV-1B6SEH8 477 aa12.54□□□□□ -0.4
APOC1-201ENST00000586638 PCCAP05165 728 aaPredicted RBP12.54□□□□□ -0.4
APOC1-201ENST00000586638 RFX5P48382 616 aaPredicted RBP12.54□□□□□ -0.4
APOC1-201ENST00000586638 HTRA3P83110 453 aa12.54□□□□□ -0.4
APOC1-201ENST00000586638 FOXO4P98177 505 aa12.54□□□□□ -0.4
APOC1-201ENST00000586638 HSP90AB4PQ58FF6 505 aa12.54□□□□□ -0.4
APOC1-201ENST00000586638 TSHZ3Q63HK5 1081 aa12.54□□□□□ -0.4
APOC1-201ENST00000586638 NLRP10Q86W26 655 aa12.54□□□□□ -0.4
APOC1-201ENST00000586638 KLRG1Q96E93 195 aa12.54□□□□□ -0.4
APOC1-201ENST00000586638 KIF1BPQ96EK5 621 aa12.54□□□□□ -0.4
APOC1-201ENST00000586638 SIL1Q9H173 461 aa12.54□□□□□ -0.4
APOC1-201ENST00000586638 USP42Q9H9J4 1324 aaKnown RBP12.54□□□□□ -0.4
APOC1-201ENST00000586638 POLRMTO00411 1230 aaKnown RBP12.53□□□□□ -0.4
APOC1-201ENST00000586638 SEC24BO95487 1268 aa12.53□□□□□ -0.4
APOC1-201ENST00000586638 PRELPP51888 382 aa12.53□□□□□ -0.4
APOC1-201ENST00000586638 TRIM28Q13263 835 aaKnown RBP12.53□□□□□ -0.4
APOC1-201ENST00000586638 USPL1Q5W0Q7 1092 aa12.53□□□□□ -0.4
APOC1-201ENST00000586638 LMBR1LQ6UX01 489 aa12.53□□□□□ -0.4
APOC1-201ENST00000586638 NUTM1Q86Y26 1132 aa12.53□□□□□ -0.4
APOC1-201ENST00000586638 MX1P20591 662 aa12.52□□□□□ -0.41
APOC1-201ENST00000586638 PDE1AP54750 535 aa12.52□□□□□ -0.41
APOC1-201ENST00000586638 ZNF34Q8IZ26 560 aa12.52□□□□□ -0.41
APOC1-201ENST00000586638 SYNE4Q8N205 404 aa12.52□□□□□ -0.41
APOC1-201ENST00000586638 JMYQ8N9B5 988 aa12.52□□□□□ -0.41
APOC1-201ENST00000586638 ZBTB38Q8NAP3 1195 aaPredicted RBP12.52□□□□□ -0.41
APOC1-201ENST00000586638 FAM89AQ96GI7 184 aa12.52□□□□□ -0.41
APOC1-201ENST00000586638 CDHR2Q9BYE9 1310 aa12.52□□□□□ -0.41
APOC1-201ENST00000586638 KIF13BQ9NQT8 1826 aa12.51□□□□□ -0.41
APOC1-201ENST00000586638 PTPN12Q05209 780 aaKnown RBP12.51□□□□□ -0.41
APOC1-201ENST00000586638 G3BP1Q13283 466 aaKnown RBP eCLIP12.51□□□□□ -0.41
APOC1-201ENST00000586638 ERC1Q8IUD2 1116 aa12.51□□□□□ -0.41
APOC1-201ENST00000586638 SMC1BQ8NDV3 1235 aa12.51□□□□□ -0.41
APOC1-201ENST00000586638 PCDH10Q9P2E7 1040 aa12.51□□□□□ -0.41
APOC1-201ENST00000586638 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.51□□□□□ -0.41
APOC1-201ENST00000586638 FAM177BA6PVY3 158 aa12.5□□□□□ -0.41
APOC1-201ENST00000586638 CDC45O75419 566 aa12.5□□□□□ -0.41
APOC1-201ENST00000586638 CAPN15O75808 1086 aa12.5□□□□□ -0.41
APOC1-201ENST00000586638 SASH1O94885 1247 aa12.5□□□□□ -0.41
APOC1-201ENST00000586638 COL13A1Q5TAT6 717 aaPredicted RBP12.5□□□□□ -0.41
APOC1-201ENST00000586638 CCDC85AQ96PX6 553 aaPredicted RBP12.5□□□□□ -0.41
APOC1-201ENST00000586638 PLA2G12BQ9BX93 195 aa12.5□□□□□ -0.41
APOC1-201ENST00000586638 COPRSQ9NQ92 184 aa12.5□□□□□ -0.41
APOC1-201ENST00000586638 NARFQ9UHQ1 456 aa12.5□□□□□ -0.41
APOC1-201ENST00000586638 TRMT112Q9UI30 125 aaKnown RBP12.5□□□□□ -0.41
APOC1-201ENST00000586638 AOX1Q06278 1338 aa12.5□□□□□ -0.41
APOC1-201ENST00000586638 KIAA1551Q9HCM1 1747 aa12.49□□□□□ -0.41
APOC1-201ENST00000586638 ZNF609O15014 1411 aa12.49□□□□□ -0.41
APOC1-201ENST00000586638 SERPINB2P05120 415 aa12.49□□□□□ -0.41
APOC1-201ENST00000586638 VEGFAP15692 232 aaPredicted RBP12.49□□□□□ -0.41
APOC1-201ENST00000586638 ANP32AP39687 249 aaKnown RBP12.49□□□□□ -0.41
APOC1-201ENST00000586638 MFAP1P55081 439 aaKnown RBP12.49□□□□□ -0.41
APOC1-201ENST00000586638 NFIXQ14938 502 aa12.49□□□□□ -0.41
APOC1-201ENST00000586638 SUSD4Q5VX71 490 aa12.49□□□□□ -0.41
APOC1-201ENST00000586638 AACSQ86V21 672 aa12.49□□□□□ -0.41
APOC1-201ENST00000586638 OSBPL3Q9H4L5 887 aa12.49□□□□□ -0.41
APOC1-201ENST00000586638 A0A1B0GUL6 1792 aa12.48□□□□□ -0.41
APOC1-201ENST00000586638 RIC1Q4ADV7 1423 aa12.48□□□□□ -0.41
APOC1-201ENST00000586638 GLTPD2A6NH11 291 aa12.48□□□□□ -0.41
APOC1-201ENST00000586638 IRS4O14654 1257 aaPredicted RBP12.48□□□□□ -0.41
APOC1-201ENST00000586638 NTSR2O95665 410 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms