RNA–Protein interactions for RNA: ENST00000586607.5

H3F3B-204, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 4 BASIC

Gene H3F3B, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-204ENST00000586607 PSMD1Q99460 953 aa12.41□□□□□ -0.42
H3F3B-204ENST00000586607 BCL2L13Q9BXK5 485 aa12.41□□□□□ -0.42
H3F3B-204ENST00000586607 API5Q9BZZ5 524 aaKnown RBP12.41□□□□□ -0.42
H3F3B-204ENST00000586607 ATP6V0A2Q9Y487 856 aa12.41□□□□□ -0.42
H3F3B-204ENST00000586607 GRM8O00222 908 aa12.4□□□□□ -0.42
H3F3B-204ENST00000586607 PPEF1O14829 653 aaPredicted RBP12.4□□□□□ -0.42
H3F3B-204ENST00000586607 CSF1RP07333 972 aa12.4□□□□□ -0.42
H3F3B-204ENST00000586607 LMNB1P20700 586 aa12.4□□□□□ -0.42
H3F3B-204ENST00000586607 CTSWP56202 376 aa12.4□□□□□ -0.42
H3F3B-204ENST00000586607 FKBP4Q02790 459 aaKnown RBP eCLIP12.4□□□□□ -0.42
H3F3B-204ENST00000586607 RTL5Q5HYW3 569 aaPredicted RBP12.4□□□□□ -0.42
H3F3B-204ENST00000586607 UBE3BQ7Z3V4 1068 aa12.4□□□□□ -0.42
H3F3B-204ENST00000586607 SP8Q8IXZ3 490 aa12.4□□□□□ -0.42
H3F3B-204ENST00000586607 TTLL11Q8NHH1 800 aa12.4□□□□□ -0.42
H3F3B-204ENST00000586607 TAOK3Q9H2K8 898 aa12.4□□□□□ -0.42
H3F3B-204ENST00000586607 NOB1Q9ULX3 412 aaKnown RBP12.4□□□□□ -0.42
H3F3B-204ENST00000586607 IPO8O15397 1037 aaKnown RBP12.39□□□□□ -0.43
H3F3B-204ENST00000586607 CCT4P50991 539 aaKnown RBP12.39□□□□□ -0.43
H3F3B-204ENST00000586607 VPS33BQ9H267 617 aa12.39□□□□□ -0.43
H3F3B-204ENST00000586607 LRRC37AA6NMS7 1700 aa12.38□□□□□ -0.43
H3F3B-204ENST00000586607 PRELPP51888 382 aa12.38□□□□□ -0.43
H3F3B-204ENST00000586607 RPS8P62241 208 aaKnown RBP12.38□□□□□ -0.43
H3F3B-204ENST00000586607 RASSF7Q02833 373 aa12.38□□□□□ -0.43
H3F3B-204ENST00000586607 C9orf131Q5VYM1 1079 aa12.38□□□□□ -0.43
H3F3B-204ENST00000586607 SLC4A10Q6U841 1118 aa12.38□□□□□ -0.43
H3F3B-204ENST00000586607 RTFDC1Q9BY42 306 aaPredicted RBP12.38□□□□□ -0.43
H3F3B-204ENST00000586607 TMX4Q9H1E5 349 aaPredicted RBP12.38□□□□□ -0.43
H3F3B-204ENST00000586607 JARID2Q92833 1246 aaPredicted RBP12.37□□□□□ -0.43
H3F3B-204ENST00000586607 CELF1Q92879 486 aaKnown RBP12.37□□□□□ -0.43
H3F3B-204ENST00000586607 CDC5LQ99459 802 aaKnown RBP12.37□□□□□ -0.43
H3F3B-204ENST00000586607 C9orf78Q9NZ63 289 aaPredicted RBP12.37□□□□□ -0.43
H3F3B-204ENST00000586607 RNF181Q9P0P0 153 aa12.37□□□□□ -0.43
H3F3B-204ENST00000586607 SBF1O95248 1867 aa12.36□□□□□ -0.43
H3F3B-204ENST00000586607 CACNA1SQ13698 1873 aa12.36□□□□□ -0.43
H3F3B-204ENST00000586607 BCAR3O75815 825 aa12.36□□□□□ -0.43
H3F3B-204ENST00000586607 FOXO4P98177 505 aa12.36□□□□□ -0.43
H3F3B-204ENST00000586607 INTS3Q68E01 1043 aaKnown RBP12.36□□□□□ -0.43
H3F3B-204ENST00000586607 ATF7IPQ6VMQ6 1270 aa12.36□□□□□ -0.43
H3F3B-204ENST00000586607 SUPT20HQ8NEM7 779 aa12.36□□□□□ -0.43
H3F3B-204ENST00000586607 USP44Q9H0E7 712 aa12.36□□□□□ -0.43
H3F3B-204ENST00000586607 ZNF219Q9P2Y4 722 aaPredicted RBP12.36□□□□□ -0.43
H3F3B-204ENST00000586607 MYH3P11055 1940 aa12.35□□□□□ -0.43
H3F3B-204ENST00000586607 TRIM27P14373 513 aa12.35□□□□□ -0.43
H3F3B-204ENST00000586607 RABL6Q3YEC7 729 aaPredicted RBP12.35□□□□□ -0.43
H3F3B-204ENST00000586607 OLFM4Q6UX06 510 aa12.35□□□□□ -0.43
H3F3B-204ENST00000586607 ANKRD18AQ8IVF6 992 aa12.35□□□□□ -0.43
H3F3B-204ENST00000586607 ZNF784Q8NCA9 323 aaPredicted RBP12.35□□□□□ -0.43
H3F3B-204ENST00000586607 GREM2Q9H772 168 aa12.35□□□□□ -0.43
H3F3B-204ENST00000586607 SEC31BQ9NQW1 1179 aa12.35□□□□□ -0.43
H3F3B-204ENST00000586607 BSDC1Q9NW68 430 aaPredicted RBP12.35□□□□□ -0.43
H3F3B-204ENST00000586607 PODXL2Q9NZ53 605 aa12.35□□□□□ -0.43
H3F3B-204ENST00000586607 NBPF7P0C2Y1 421 aaPredicted RBP12.34□□□□□ -0.43
H3F3B-204ENST00000586607 IARSP41252 1262 aaKnown RBP12.34□□□□□ -0.43
H3F3B-204ENST00000586607 ZKSCAN2Q63HK3 967 aa12.34□□□□□ -0.43
H3F3B-204ENST00000586607 MPNDQ8N594 471 aa12.34□□□□□ -0.43
H3F3B-204ENST00000586607 KAZALD1Q96I82 304 aa12.34□□□□□ -0.43
H3F3B-204ENST00000586607 HDAC5Q9UQL6 1122 aa12.34□□□□□ -0.43
H3F3B-204ENST00000586607 COL4A1P02462 1669 aa12.34□□□□□ -0.43
H3F3B-204ENST00000586607 DICER1Q9UPY3 1922 aaKnown RBP12.33□□□□□ -0.44
H3F3B-204ENST00000586607 ITGA6P23229 1130 aa12.33□□□□□ -0.44
H3F3B-204ENST00000586607 EPHA10Q5JZY3 1008 aa12.33□□□□□ -0.44
H3F3B-204ENST00000586607 DPP8Q6V1X1 898 aaPredicted RBP12.33□□□□□ -0.44
H3F3B-204ENST00000586607 SUCLG2Q96I99 432 aa12.33□□□□□ -0.44
H3F3B-204ENST00000586607 DUOX1Q9NRD9 1551 aa12.33□□□□□ -0.44
H3F3B-204ENST00000586607 LTBP1Q14766 1721 aa12.33□□□□□ -0.44
H3F3B-204ENST00000586607 ANKRD18BA2A2Z9 1011 aa12.32□□□□□ -0.44
H3F3B-204ENST00000586607 GLTPD2A6NH11 291 aa12.32□□□□□ -0.44
H3F3B-204ENST00000586607 FZD9O00144 591 aa12.32□□□□□ -0.44
H3F3B-204ENST00000586607 IGHMBP2P38935 993 aaKnown RBP12.32□□□□□ -0.44
H3F3B-204ENST00000586607 IFIT5Q13325 482 aaKnown RBP12.32□□□□□ -0.44
H3F3B-204ENST00000586607 FAM161AQ3B820 660 aa12.32□□□□□ -0.44
H3F3B-204ENST00000586607 LMBR1LQ6UX01 489 aa12.32□□□□□ -0.44
H3F3B-204ENST00000586607 ZNF277Q9NRM2 450 aaPredicted RBP12.32□□□□□ -0.44
H3F3B-204ENST00000586607 TIAM2Q8IVF5 1701 aa12.31□□□□□ -0.44
H3F3B-204ENST00000586607 KIAA2012Q0VF49 1180 aa12.31□□□□□ -0.44
H3F3B-204ENST00000586607 SLC51AQ86UW1 340 aa12.31□□□□□ -0.44
H3F3B-204ENST00000586607 FRAT1Q92837 279 aaPredicted RBP12.31□□□□□ -0.44
H3F3B-204ENST00000586607 CCDC85AQ96PX6 553 aaPredicted RBP12.31□□□□□ -0.44
H3F3B-204ENST00000586607 MINPP1Q9UNW1 487 aa12.31□□□□□ -0.44
H3F3B-204ENST00000586607 XDHP47989 1333 aa12.31□□□□□ -0.44
H3F3B-204ENST00000586607 KDM2BQ8NHM5 1336 aa12.31□□□□□ -0.44
H3F3B-204ENST00000586607 TAF1P21675 1872 aa12.3□□□□□ -0.44
H3F3B-204ENST00000586607 GNAI3P08754 354 aa12.3□□□□□ -0.44
H3F3B-204ENST00000586607 UBTFL1P0CB47 393 aaPredicted RBP12.3□□□□□ -0.44
H3F3B-204ENST00000586607 MS4A1P11836 297 aa12.3□□□□□ -0.44
H3F3B-204ENST00000586607 GPSM2P81274 684 aa12.3□□□□□ -0.44
H3F3B-204ENST00000586607 CCDC57Q2TAC2 916 aa12.3□□□□□ -0.44
H3F3B-204ENST00000586607 DPY19L2Q6NUT2 758 aa12.3□□□□□ -0.44
H3F3B-204ENST00000586607 ANKRD44Q8N8A2 993 aa12.3□□□□□ -0.44
H3F3B-204ENST00000586607 JDP2Q8WYK2 163 aa12.3□□□□□ -0.44
H3F3B-204ENST00000586607 EYA3Q99504 573 aa12.3□□□□□ -0.44
H3F3B-204ENST00000586607 BICC1Q9H694 974 aaKnown RBP12.3□□□□□ -0.44
H3F3B-204ENST00000586607 RCAN3Q9UKA8 241 aa12.3□□□□□ -0.44
H3F3B-204ENST00000586607 NSFL1CQ9UNZ2 370 aaKnown RBP12.3□□□□□ -0.44
H3F3B-204ENST00000586607 ATP2B4P23634 1241 aa12.29□□□□□ -0.44
H3F3B-204ENST00000586607 DZIP1LQ8IYY4 767 aaKnown RBP12.29□□□□□ -0.44
H3F3B-204ENST00000586607 LARGE2Q8N3Y3 721 aa12.29□□□□□ -0.44
H3F3B-204ENST00000586607 TBC1D16Q8TBP0 767 aa12.29□□□□□ -0.44
H3F3B-204ENST00000586607 MPHOSPH8Q99549 860 aa12.29□□□□□ -0.44
H3F3B-204ENST00000586607 ANKRD2Q9GZV1 360 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms