RNA–Protein interactions for RNA: ENST00000586499.5

TPM4-204, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-204ENST00000586499 CELF1Q92879 486 aaKnown RBP24.39■■□□□ 1.49
TPM4-204ENST00000586499 COL4A1P02462 1669 aa24.38■■□□□ 1.49
TPM4-204ENST00000586499 NEXNQ0ZGT2 675 aa24.38■■□□□ 1.49
TPM4-204ENST00000586499 GRIPAP1Q4V328 841 aa24.38■■□□□ 1.49
TPM4-204ENST00000586499 TMX4Q9H1E5 349 aaPredicted RBP24.38■■□□□ 1.49
TPM4-204ENST00000586499 ZNF541Q9H0D2 1346 aa24.37■■□□□ 1.49
TPM4-204ENST00000586499 COL4A5P29400 1685 aa24.37■■□□□ 1.49
TPM4-204ENST00000586499 RBM46Q8TBY0 533 aaKnown RBP24.37■■□□□ 1.49
TPM4-204ENST00000586499 NEURL1BA8MQ27 555 aa24.36■■□□□ 1.49
TPM4-204ENST00000586499 CCDC85AQ96PX6 553 aaPredicted RBP24.36■■□□□ 1.49
TPM4-204ENST00000586499 WDR90Q96KV7 1748 aa24.35■■□□□ 1.49
TPM4-204ENST00000586499 FZD9O00144 591 aa24.35■■□□□ 1.49
TPM4-204ENST00000586499 HSPA6P17066 643 aa24.35■■□□□ 1.49
TPM4-204ENST00000586499 DPP8Q6V1X1 898 aaPredicted RBP24.35■■□□□ 1.49
TPM4-204ENST00000586499 MPNDQ8N594 471 aa24.35■■□□□ 1.49
TPM4-204ENST00000586499 SEC31BQ9NQW1 1179 aa24.35■■□□□ 1.49
TPM4-204ENST00000586499 PDE8AO60658 829 aa24.34■■□□□ 1.49
TPM4-204ENST00000586499 LARGE2Q8N3Y3 721 aa24.34■■□□□ 1.49
TPM4-204ENST00000586499 DNAAF4Q8WXU2 420 aa24.34■■□□□ 1.49
TPM4-204ENST00000586499 JDP2Q8WYK2 163 aa24.34■■□□□ 1.49
TPM4-204ENST00000586499 CDCA7LQ96GN5 454 aa24.34■■□□□ 1.49
TPM4-204ENST00000586499 F6X3S4 739 aa24.33■■□□□ 1.49
TPM4-204ENST00000586499 PPIP5K2O43314 1243 aa24.33■■□□□ 1.49
TPM4-204ENST00000586499 AOC3Q16853 763 aa24.33■■□□□ 1.49
TPM4-204ENST00000586499 DIEXFQ68CQ4 756 aaKnown RBP24.33■■□□□ 1.49
TPM4-204ENST00000586499 RTFDC1Q9BY42 306 aaPredicted RBP24.33■■□□□ 1.49
TPM4-204ENST00000586499 CACNA1FO60840 1977 aa24.33■■□□□ 1.48
TPM4-204ENST00000586499 HSP90B1P14625 803 aaKnown RBP24.32■■□□□ 1.48
TPM4-204ENST00000586499 SLFN5Q08AF3 891 aa24.32■■□□□ 1.48
TPM4-204ENST00000586499 MIER1Q8N108 512 aa24.32■■□□□ 1.48
TPM4-204ENST00000586499 CDHR2Q9BYE9 1310 aa24.32■■□□□ 1.48
TPM4-204ENST00000586499 CEP350Q5VT06 3117 aa24.31■■□□□ 1.48
TPM4-204ENST00000586499 E9PSI1 815 aa24.31■■□□□ 1.48
TPM4-204ENST00000586499 H7C1W4 665 aa24.31■■□□□ 1.48
TPM4-204ENST00000586499 RPS8P62241 208 aaKnown RBP24.31■■□□□ 1.48
TPM4-204ENST00000586499 GCKRQ14397 625 aa24.31■■□□□ 1.48
TPM4-204ENST00000586499 UBE3BQ7Z3V4 1068 aa24.31■■□□□ 1.48
TPM4-204ENST00000586499 TMC4Q7Z404 712 aa24.31■■□□□ 1.48
TPM4-204ENST00000586499 CCDC152Q4G0S7 254 aa24.3■■□□□ 1.48
TPM4-204ENST00000586499 NSFL1CQ9UNZ2 370 aaKnown RBP24.3■■□□□ 1.48
TPM4-204ENST00000586499 FSTL1Q12841 308 aa24.29■■□□□ 1.48
TPM4-204ENST00000586499 NIM1KQ8IY84 436 aa24.29■■□□□ 1.48
TPM4-204ENST00000586499 SUPT20HQ8NEM7 779 aa24.29■■□□□ 1.48
TPM4-204ENST00000586499 LINS1Q8NG48 757 aa24.29■■□□□ 1.48
TPM4-204ENST00000586499 L3MBTL3Q96JM7 780 aaPredicted RBP24.29■■□□□ 1.48
TPM4-204ENST00000586499 LRRC37AA6NMS7 1700 aa24.28■■□□□ 1.48
TPM4-204ENST00000586499 POTEIP0CG38 1075 aa24.28■■□□□ 1.48
TPM4-204ENST00000586499 POTEJP0CG39 1038 aa24.28■■□□□ 1.48
TPM4-204ENST00000586499 CTSWP56202 376 aa24.28■■□□□ 1.48
TPM4-204ENST00000586499 EIF6P56537 245 aaKnown RBP24.28■■□□□ 1.48
TPM4-204ENST00000586499 GPSM2P81274 684 aa24.28■■□□□ 1.48
TPM4-204ENST00000586499 TTLL11Q8NHH1 800 aa24.28■■□□□ 1.48
TPM4-204ENST00000586499 GJA3Q9Y6H8 435 aa24.28■■□□□ 1.48
TPM4-204ENST00000586499 CASP7P55210 303 aa24.27■■□□□ 1.48
TPM4-204ENST00000586499 SMC1BQ8NDV3 1235 aa24.27■■□□□ 1.48
TPM4-204ENST00000586499 VPS33BQ9H267 617 aa24.27■■□□□ 1.48
TPM4-204ENST00000586499 DUOX1Q9NRD9 1551 aa24.27■■□□□ 1.48
TPM4-204ENST00000586499 KIAA2012Q0VF49 1180 aa24.26■■□□□ 1.47
TPM4-204ENST00000586499 BEND3Q5T5X7 828 aa24.26■■□□□ 1.47
TPM4-204ENST00000586499 GPC2Q8N158 579 aa24.26■■□□□ 1.47
TPM4-204ENST00000586499 GREM2Q9H772 168 aa24.26■■□□□ 1.47
TPM4-204ENST00000586499 POLLQ9UGP5 575 aa24.26■■□□□ 1.47
TPM4-204ENST00000586499 MRPL50Q8N5N7 158 aaKnown RBP24.25■■□□□ 1.47
TPM4-204ENST00000586499 TAF1DQ9H5J8 278 aaPredicted RBP24.25■■□□□ 1.47
TPM4-204ENST00000586499 IQCA1LA6NCM1 817 aa24.24■■□□□ 1.47
TPM4-204ENST00000586499 C6orf229H3BNL8 230 aa24.24■■□□□ 1.47
TPM4-204ENST00000586499 TRMT2AQ8IZ69 625 aaKnown RBP24.24■■□□□ 1.47
TPM4-204ENST00000586499 GPR101Q96P66 508 aaPredicted RBP24.24■■□□□ 1.47
TPM4-204ENST00000586499 RIMBP2O15034 1052 aa24.23■■□□□ 1.47
TPM4-204ENST00000586499 SLC4A10Q6U841 1118 aa24.23■■□□□ 1.47
TPM4-204ENST00000586499 ANKRD18AQ8IVF6 992 aa24.23■■□□□ 1.47
TPM4-204ENST00000586499 SSH1Q8WYL5 1049 aa24.23■■□□□ 1.47
TPM4-204ENST00000586499 HACL1Q9UJ83 578 aa24.23■■□□□ 1.47
TPM4-204ENST00000586499 ZNRF3Q9ULT6 936 aa24.23■■□□□ 1.47
TPM4-204ENST00000586499 SCN4AP35499 1836 aa24.22■■□□□ 1.47
TPM4-204ENST00000586499 HTRA3P83110 453 aa24.22■■□□□ 1.47
TPM4-204ENST00000586499 CXCL9Q07325 125 aa24.22■■□□□ 1.47
TPM4-204ENST00000586499 BCL2L13Q9BXK5 485 aa24.22■■□□□ 1.47
TPM4-204ENST00000586499 EPHX2P34913 555 aa24.21■■□□□ 1.47
TPM4-204ENST00000586499 APLP1P51693 650 aa24.21■■□□□ 1.47
TPM4-204ENST00000586499 WASHC4Q2M389 1173 aa24.21■■□□□ 1.47
TPM4-204ENST00000586499 EAPPQ56P03 285 aaPredicted RBP24.21■■□□□ 1.47
TPM4-204ENST00000586499 TBC1D16Q8TBP0 767 aa24.21■■□□□ 1.47
TPM4-204ENST00000586499 PLA2G12BQ9BX93 195 aa24.21■■□□□ 1.47
TPM4-204ENST00000586499 MYH3P11055 1940 aa24.21■■□□□ 1.47
TPM4-204ENST00000586499 YDJCA8MPS7 323 aa24.2■■□□□ 1.46
TPM4-204ENST00000586499 ANKIB1Q9P2G1 1089 aa24.2■■□□□ 1.46
TPM4-204ENST00000586499 LTBP1Q14766 1721 aa24.2■■□□□ 1.46
TPM4-204ENST00000586499 RAD17O75943 681 aa24.19■■□□□ 1.46
TPM4-204ENST00000586499 SCNN1DP51172 638 aa24.19■■□□□ 1.46
TPM4-204ENST00000586499 CHADLQ6NUI6 762 aa24.19■■□□□ 1.46
TPM4-204ENST00000586499 CDC5LQ99459 802 aaKnown RBP24.19■■□□□ 1.46
TPM4-204ENST00000586499 DBNDD1Q9H9R9 158 aa24.19■■□□□ 1.46
TPM4-204ENST00000586499 PODXL2Q9NZ53 605 aa24.19■■□□□ 1.46
TPM4-204ENST00000586499 RTL9Q8NET4 1388 aa24.18■■□□□ 1.46
TPM4-204ENST00000586499 WTIPA6NIX2 430 aaPredicted RBP24.18■■□□□ 1.46
TPM4-204ENST00000586499 CSF1RP07333 972 aa24.18■■□□□ 1.46
TPM4-204ENST00000586499 EPS15P42566 896 aa24.18■■□□□ 1.46
TPM4-204ENST00000586499 DOK7Q18PE1 504 aa24.18■■□□□ 1.46
TPM4-204ENST00000586499 FAM161AQ3B820 660 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms