RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 PCCAP05165 728 aaPredicted RBP25.18■■□□□ 1.62
ATG4D-204ENST00000586417 NUTM1Q86Y26 1132 aa25.18■■□□□ 1.62
ATG4D-204ENST00000586417 NLGN1Q8N2Q7 840 aa25.18■■□□□ 1.62
ATG4D-204ENST00000586417 UTP14AQ9BVJ6 771 aaKnown RBP25.18■■□□□ 1.62
ATG4D-204ENST00000586417 DDR1Q08345 913 aa25.17■■□□□ 1.62
ATG4D-204ENST00000586417 IL1RAPL2Q9NP60 686 aa25.17■■□□□ 1.62
ATG4D-204ENST00000586417 PSDA5PKW4 1024 aaPredicted RBP25.16■■□□□ 1.62
ATG4D-204ENST00000586417 MX1P20591 662 aa25.16■■□□□ 1.62
ATG4D-204ENST00000586417 IPO9Q96P70 1041 aaKnown RBP25.16■■□□□ 1.62
ATG4D-204ENST00000586417 STAP2Q9UGK3 403 aa25.16■■□□□ 1.62
ATG4D-204ENST00000586417 CARMIL3Q8ND23 1372 aa25.14■■□□□ 1.62
ATG4D-204ENST00000586417 CASZ1Q86V15 1759 aa25.14■■□□□ 1.62
ATG4D-204ENST00000586417 FOXO4P98177 505 aa25.14■■□□□ 1.62
ATG4D-204ENST00000586417 NBPF5PQ86XG9 351 aaPredicted RBP25.14■■□□□ 1.62
ATG4D-204ENST00000586417 CCDC24Q8N4L8 307 aa25.14■■□□□ 1.62
ATG4D-204ENST00000586417 POLRMTO00411 1230 aaKnown RBP25.13■■□□□ 1.61
ATG4D-204ENST00000586417 RFX5P48382 616 aaPredicted RBP25.13■■□□□ 1.61
ATG4D-204ENST00000586417 ERFEQ4G0M1 354 aa25.13■■□□□ 1.61
ATG4D-204ENST00000586417 SH3TC1Q8TE82 1336 aa25.13■■□□□ 1.61
ATG4D-204ENST00000586417 MMP10P09238 476 aa25.13■■□□□ 1.61
ATG4D-204ENST00000586417 TBC1D9Q6ZT07 1266 aa25.13■■□□□ 1.61
ATG4D-204ENST00000586417 ERC1Q8IUD2 1116 aa25.13■■□□□ 1.61
ATG4D-204ENST00000586417 IRS4O14654 1257 aaPredicted RBP25.12■■□□□ 1.61
ATG4D-204ENST00000586417 SERPINB2P05120 415 aa25.12■■□□□ 1.61
ATG4D-204ENST00000586417 HCLS1P14317 486 aaPredicted RBP25.12■■□□□ 1.61
ATG4D-204ENST00000586417 SDSP20132 328 aa25.12■■□□□ 1.61
ATG4D-204ENST00000586417 OS9Q13438 667 aaPredicted RBP25.12■■□□□ 1.61
ATG4D-204ENST00000586417 TSHZ3Q63HK5 1081 aa25.12■■□□□ 1.61
ATG4D-204ENST00000586417 AOX1Q06278 1338 aa25.12■■□□□ 1.61
ATG4D-204ENST00000586417 DDX60Q8IY21 1712 aaKnown RBP25.12■■□□□ 1.61
ATG4D-204ENST00000586417 CDC45O75419 566 aa25.11■■□□□ 1.61
ATG4D-204ENST00000586417 TBC1D32Q96NH3 1257 aa25.11■■□□□ 1.61
ATG4D-204ENST00000586417 COPRSQ9NQ92 184 aa25.11■■□□□ 1.61
ATG4D-204ENST00000586417 CDHR2Q9BYE9 1310 aa25.11■■□□□ 1.61
ATG4D-204ENST00000586417 TPTE2Q6XPS3 522 aa25.1■■□□□ 1.61
ATG4D-204ENST00000586417 UPF2Q9HAU5 1272 aaKnown RBP25.1■■□□□ 1.61
ATG4D-204ENST00000586417 SASH1O94885 1247 aa25.1■■□□□ 1.61
ATG4D-204ENST00000586417 ZBTB7AO95365 584 aa25.1■■□□□ 1.61
ATG4D-204ENST00000586417 LMBR1LQ6UX01 489 aa25.1■■□□□ 1.61
ATG4D-204ENST00000586417 KLHDC4Q8TBB5 520 aa25.1■■□□□ 1.61
ATG4D-204ENST00000586417 NYXQ9GZU5 481 aa25.1■■□□□ 1.61
ATG4D-204ENST00000586417 ABCC12Q96J65 1359 aa25.1■■□□□ 1.61
ATG4D-204ENST00000586417 GTF2E1P29083 439 aaPredicted RBP25.09■■□□□ 1.61
ATG4D-204ENST00000586417 MFAP1P55081 439 aaKnown RBP25.09■■□□□ 1.61
ATG4D-204ENST00000586417 PTPN12Q05209 780 aaKnown RBP25.09■■□□□ 1.61
ATG4D-204ENST00000586417 SLC16A10Q8TF71 515 aa25.09■■□□□ 1.61
ATG4D-204ENST00000586417 G3BP1Q13283 466 aaKnown RBP eCLIP25.08■■□□□ 1.61
ATG4D-204ENST00000586417 PRR5LQ6MZQ0 368 aa25.08■■□□□ 1.61
ATG4D-204ENST00000586417 MYH3P11055 1940 aa25.08■■□□□ 1.61
ATG4D-204ENST00000586417 CNBD1Q8NA66 436 aa25.08■■□□□ 1.6
ATG4D-204ENST00000586417 NPHP1O15259 732 aa25.07■■□□□ 1.6
ATG4D-204ENST00000586417 C3orf67Q6ZVT6 689 aa25.07■■□□□ 1.6
ATG4D-204ENST00000586417 PLA2G12BQ9BX93 195 aa25.07■■□□□ 1.6
ATG4D-204ENST00000586417 SIL1Q9H173 461 aa25.07■■□□□ 1.6
ATG4D-204ENST00000586417 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.07■■□□□ 1.6
ATG4D-204ENST00000586417 LAMB2P55268 1798 aa25.07■■□□□ 1.6
ATG4D-204ENST00000586417 NRXN2Q9P2S2 1712 aa25.07■■□□□ 1.6
ATG4D-204ENST00000586417 CLASRPQ8N2M8 674 aaKnown RBP25.06■■□□□ 1.6
ATG4D-204ENST00000586417 CCDC85AQ96PX6 553 aaPredicted RBP25.06■■□□□ 1.6
ATG4D-204ENST00000586417 ATF5Q9Y2D1 282 aaPredicted RBP25.06■■□□□ 1.6
ATG4D-204ENST00000586417 PARP3Q9Y6F1 533 aa25.06■■□□□ 1.6
ATG4D-204ENST00000586417 PI4K2BQ8TCG2 481 aa25.05■■□□□ 1.6
ATG4D-204ENST00000586417 PDE8AO60658 829 aa25.05■■□□□ 1.6
ATG4D-204ENST00000586417 SLC10A5Q5PT55 438 aa25.05■■□□□ 1.6
ATG4D-204ENST00000586417 TNRC6CQ9HCJ0 1690 aaKnown RBP25.04■■□□□ 1.6
ATG4D-204ENST00000586417 DDRGK1Q96HY6 314 aa25.04■■□□□ 1.6
ATG4D-204ENST00000586417 CTSWP56202 376 aa25.03■■□□□ 1.6
ATG4D-204ENST00000586417 TTLL11Q8NHH1 800 aa25.03■■□□□ 1.6
ATG4D-204ENST00000586417 C22orf23Q9BZE7 217 aa25.03■■□□□ 1.6
ATG4D-204ENST00000586417 MTFR1LQ9H019 292 aa25.03■■□□□ 1.6
ATG4D-204ENST00000586417 CHMP3Q9Y3E7 222 aa25.03■■□□□ 1.6
ATG4D-204ENST00000586417 CSF1RP07333 972 aa25.02■■□□□ 1.6
ATG4D-204ENST00000586417 TTC41PQ6P2S7 1318 aa25.01■■□□□ 1.59
ATG4D-204ENST00000586417 SOCS7O14512 581 aa25.01■■□□□ 1.59
ATG4D-204ENST00000586417 EAF2Q96CJ1 260 aaPredicted RBP25.01■■□□□ 1.59
ATG4D-204ENST00000586417 ANKRD31Q8N7Z5 1873 aa25.01■■□□□ 1.59
ATG4D-204ENST00000586417 AACSQ86V21 672 aa25■■□□□ 1.59
ATG4D-204ENST00000586417 ST5P78524 1137 aa25■■□□□ 1.59
ATG4D-204ENST00000586417 GREM2Q9H772 168 aa25■■□□□ 1.59
ATG4D-204ENST00000586417 TAF1P21675 1872 aa24.98■■□□□ 1.59
ATG4D-204ENST00000586417 IFIT2P09913 472 aaKnown RBP24.98■■□□□ 1.59
ATG4D-204ENST00000586417 NLRP3Q96P20 1036 aa24.98■■□□□ 1.59
ATG4D-204ENST00000586417 SRCAPQ6ZRS2 3230 aa24.98■■□□□ 1.59
ATG4D-204ENST00000586417 RBM25P49756 843 aaKnown RBP24.98■■□□□ 1.59
ATG4D-204ENST00000586417 ECHDC1Q9NTX5 307 aa24.98■■□□□ 1.59
ATG4D-204ENST00000586417 HSP90B1P14625 803 aaKnown RBP24.97■■□□□ 1.59
ATG4D-204ENST00000586417 ATG9AQ7Z3C6 839 aa24.97■■□□□ 1.59
ATG4D-204ENST00000586417 TFCP2Q12800 502 aa24.96■■□□□ 1.59
ATG4D-204ENST00000586417 SF3B3Q15393 1217 aaKnown RBP24.96■■□□□ 1.59
ATG4D-204ENST00000586417 SEC31BQ9NQW1 1179 aa24.96■■□□□ 1.59
ATG4D-204ENST00000586417 TLR7Q9NYK1 1049 aaKnown RBP24.96■■□□□ 1.59
ATG4D-204ENST00000586417 COL4A1P02462 1669 aa24.96■■□□□ 1.59
ATG4D-204ENST00000586417 TRIM6-TRIM34B2RNG4 842 aa24.95■■□□□ 1.59
ATG4D-204ENST00000586417 EIF5BO60841 1220 aaKnown RBP24.95■■□□□ 1.59
ATG4D-204ENST00000586417 GLRX3O76003 335 aaKnown RBP24.95■■□□□ 1.59
ATG4D-204ENST00000586417 ITGA6P23229 1130 aa24.95■■□□□ 1.59
ATG4D-204ENST00000586417 CASC1Q6TDU7 716 aa24.95■■□□□ 1.59
ATG4D-204ENST00000586417 ZNF594Q96JF6 807 aaPredicted RBP24.95■■□□□ 1.59
ATG4D-204ENST00000586417 SGIP1Q9BQI5 828 aa24.95■■□□□ 1.59
ATG4D-204ENST00000586417 RIC1Q4ADV7 1423 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms