RNA–Protein interactions for RNA: ENST00000586407.1

LIG3-208, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 815 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-208ENST00000586407 LRRC37AA6NMS7 1700 aa36.04■■■■□ 3.36
LIG3-208ENST00000586407 BBOX1O75936 387 aa36.04■■■■□ 3.36
LIG3-208ENST00000586407 FLIIQ13045 1269 aa36.04■■■■□ 3.36
LIG3-208ENST00000586407 CELF1Q92879 486 aaKnown RBP36.04■■■■□ 3.36
LIG3-208ENST00000586407 PCCAP05165 728 aaPredicted RBP36.03■■■■□ 3.36
LIG3-208ENST00000586407 CWF19L2Q2TBE0 894 aaKnown RBP36.03■■■■□ 3.36
LIG3-208ENST00000586407 SP8Q8IXZ3 490 aa36.02■■■■□ 3.36
LIG3-208ENST00000586407 TMX4Q9H1E5 349 aaPredicted RBP36.02■■■■□ 3.36
LIG3-208ENST00000586407 LARGE2Q8N3Y3 721 aa36.01■■■■□ 3.36
LIG3-208ENST00000586407 CCDC85AQ96PX6 553 aaPredicted RBP36■■■■□ 3.35
LIG3-208ENST00000586407 FZD9O00144 591 aa35.99■■■■□ 3.35
LIG3-208ENST00000586407 FKBP5Q13451 457 aaPredicted RBP35.99■■■■□ 3.35
LIG3-208ENST00000586407 AOC3Q16853 763 aa35.99■■■■□ 3.35
LIG3-208ENST00000586407 GRIPAP1Q4V328 841 aa35.99■■■■□ 3.35
LIG3-208ENST00000586407 JDP2Q8WYK2 163 aa35.99■■■■□ 3.35
LIG3-208ENST00000586407 DUOX1Q9NRD9 1551 aa35.98■■■■□ 3.35
LIG3-208ENST00000586407 PPIP5K2O43314 1243 aa35.98■■■■□ 3.35
LIG3-208ENST00000586407 NEXNQ0ZGT2 675 aa35.98■■■■□ 3.35
LIG3-208ENST00000586407 DPP8Q6V1X1 898 aaPredicted RBP35.98■■■■□ 3.35
LIG3-208ENST00000586407 SEC31BQ9NQW1 1179 aa35.98■■■■□ 3.35
LIG3-208ENST00000586407 NEURL1BA8MQ27 555 aa35.97■■■■□ 3.35
LIG3-208ENST00000586407 MPNDQ8N594 471 aa35.97■■■■□ 3.35
LIG3-208ENST00000586407 SCN4AP35499 1836 aa35.97■■■■□ 3.35
LIG3-208ENST00000586407 MYH3P11055 1940 aa35.96■■■■□ 3.35
LIG3-208ENST00000586407 SMC1BQ8NDV3 1235 aa35.95■■■■□ 3.35
LIG3-208ENST00000586407 CCER2I3L3R5 266 aa35.94■■■■□ 3.34
LIG3-208ENST00000586407 PDE8AO60658 829 aa35.94■■■■□ 3.34
LIG3-208ENST00000586407 POTEIP0CG38 1075 aa35.94■■■■□ 3.34
LIG3-208ENST00000586407 POTEJP0CG39 1038 aa35.94■■■■□ 3.34
LIG3-208ENST00000586407 FSTL1Q12841 308 aa35.94■■■■□ 3.34
LIG3-208ENST00000586407 NIM1KQ8IY84 436 aa35.93■■■■□ 3.34
LIG3-208ENST00000586407 DNAAF4Q8WXU2 420 aa35.93■■■■□ 3.34
LIG3-208ENST00000586407 L3MBTL3Q96JM7 780 aaPredicted RBP35.93■■■■□ 3.34
LIG3-208ENST00000586407 RTFDC1Q9BY42 306 aaPredicted RBP35.93■■■■□ 3.34
LIG3-208ENST00000586407 SPEF2Q9C093 1822 aa35.92■■■■□ 3.34
LIG3-208ENST00000586407 CDHR2Q9BYE9 1310 aa35.92■■■■□ 3.34
LIG3-208ENST00000586407 F6X3S4 739 aa35.92■■■■□ 3.34
LIG3-208ENST00000586407 GJA3Q9Y6H8 435 aa35.92■■■■□ 3.34
LIG3-208ENST00000586407 EIF6P56537 245 aaKnown RBP35.91■■■■□ 3.34
LIG3-208ENST00000586407 UBE3BQ7Z3V4 1068 aa35.91■■■■□ 3.34
LIG3-208ENST00000586407 RPS8P62241 208 aaKnown RBP35.9■■■■□ 3.34
LIG3-208ENST00000586407 HTRA3P83110 453 aa35.9■■■■□ 3.34
LIG3-208ENST00000586407 TMC4Q7Z404 712 aa35.9■■■■□ 3.34
LIG3-208ENST00000586407 SUPT20HQ8NEM7 779 aa35.9■■■■□ 3.34
LIG3-208ENST00000586407 LTBP1Q14766 1721 aa35.9■■■■□ 3.34
LIG3-208ENST00000586407 HSP90B1P14625 803 aaKnown RBP35.89■■■■□ 3.34
LIG3-208ENST00000586407 CCDC152Q4G0S7 254 aa35.89■■■■□ 3.34
LIG3-208ENST00000586407 GPSM2P81274 684 aa35.88■■■■□ 3.33
LIG3-208ENST00000586407 TAF1DQ9H5J8 278 aaPredicted RBP35.88■■■■□ 3.33
LIG3-208ENST00000586407 NSFL1CQ9UNZ2 370 aaKnown RBP35.88■■■■□ 3.33
LIG3-208ENST00000586407 APLP1P51693 650 aa35.87■■■■□ 3.33
LIG3-208ENST00000586407 CTSWP56202 376 aa35.87■■■■□ 3.33
LIG3-208ENST00000586407 GCKRQ14397 625 aa35.87■■■■□ 3.33
LIG3-208ENST00000586407 GPC2Q8N158 579 aa35.87■■■■□ 3.33
LIG3-208ENST00000586407 CDCA7LQ96GN5 454 aa35.87■■■■□ 3.33
LIG3-208ENST00000586407 IQCA1LA6NCM1 817 aa35.86■■■■□ 3.33
LIG3-208ENST00000586407 GPR101Q96P66 508 aaPredicted RBP35.86■■■■□ 3.33
LIG3-208ENST00000586407 H7C1W4 665 aa35.85■■■■□ 3.33
LIG3-208ENST00000586407 KIAA2012Q0VF49 1180 aa35.85■■■■□ 3.33
LIG3-208ENST00000586407 LINS1Q8NG48 757 aa35.85■■■■□ 3.33
LIG3-208ENST00000586407 HACL1Q9UJ83 578 aa35.85■■■■□ 3.33
LIG3-208ENST00000586407 E9PSI1 815 aa35.84■■■■□ 3.33
LIG3-208ENST00000586407 SLFN5Q08AF3 891 aa35.83■■■■□ 3.33
LIG3-208ENST00000586407 EAPPQ56P03 285 aaPredicted RBP35.83■■■■□ 3.33
LIG3-208ENST00000586407 VPS33BQ9H267 617 aa35.83■■■■□ 3.33
LIG3-208ENST00000586407 POLLQ9UGP5 575 aa35.83■■■■□ 3.33
LIG3-208ENST00000586407 EPHX2P34913 555 aa35.82■■■■□ 3.32
LIG3-208ENST00000586407 TTLL11Q8NHH1 800 aa35.82■■■■□ 3.32
LIG3-208ENST00000586407 GREM2Q9H772 168 aa35.82■■■■□ 3.32
LIG3-208ENST00000586407 ZNRF3Q9ULT6 936 aa35.82■■■■□ 3.32
LIG3-208ENST00000586407 C6orf229H3BNL8 230 aa35.81■■■■□ 3.32
LIG3-208ENST00000586407 RIMBP2O15034 1052 aa35.81■■■■□ 3.32
LIG3-208ENST00000586407 CASP7P55210 303 aa35.81■■■■□ 3.32
LIG3-208ENST00000586407 CXCL9Q07325 125 aa35.8■■■■□ 3.32
LIG3-208ENST00000586407 BEND3Q5T5X7 828 aa35.8■■■■□ 3.32
LIG3-208ENST00000586407 CHADLQ6NUI6 762 aa35.8■■■■□ 3.32
LIG3-208ENST00000586407 CEP350Q5VT06 3117 aa35.79■■■■□ 3.32
LIG3-208ENST00000586407 ADAMTSL1Q8N6G6 1762 aa35.79■■■■□ 3.32
LIG3-208ENST00000586407 SCNN1DP51172 638 aa35.78■■■■□ 3.32
LIG3-208ENST00000586407 ANKRD18AQ8IVF6 992 aa35.78■■■■□ 3.32
LIG3-208ENST00000586407 MIER1Q8N108 512 aa35.78■■■■□ 3.32
LIG3-208ENST00000586407 YDJCA8MPS7 323 aa35.77■■■■□ 3.32
LIG3-208ENST00000586407 RAD17O75943 681 aa35.77■■■■□ 3.32
LIG3-208ENST00000586407 WASHC4Q2M389 1173 aa35.77■■■■□ 3.32
LIG3-208ENST00000586407 TBC1D16Q8TBP0 767 aa35.77■■■■□ 3.32
LIG3-208ENST00000586407 EPS15P42566 896 aa35.76■■■■□ 3.32
LIG3-208ENST00000586407 DIEXFQ68CQ4 756 aaKnown RBP35.76■■■■□ 3.32
LIG3-208ENST00000586407 MRPL50Q8N5N7 158 aaKnown RBP35.76■■■■□ 3.32
LIG3-208ENST00000586407 DBNDD1Q9H9R9 158 aa35.76■■■■□ 3.32
LIG3-208ENST00000586407 SLC4A10Q6U841 1118 aa35.75■■■■□ 3.31
LIG3-208ENST00000586407 LDHDQ86WU2 507 aa35.75■■■■□ 3.31
LIG3-208ENST00000586407 ANKIB1Q9P2G1 1089 aa35.75■■■■□ 3.31
LIG3-208ENST00000586407 UFL1O94874 794 aa35.74■■■■□ 3.31
LIG3-208ENST00000586407 LMOD1P29536 600 aaPredicted RBP35.74■■■■□ 3.31
LIG3-208ENST00000586407 PLA2G12BQ9BX93 195 aa35.74■■■■□ 3.31
LIG3-208ENST00000586407 BCL2L13Q9BXK5 485 aa35.74■■■■□ 3.31
LIG3-208ENST00000586407 CLEC11AQ9Y240 323 aa35.74■■■■□ 3.31
LIG3-208ENST00000586407 DOK7Q18PE1 504 aa35.73■■■■□ 3.31
LIG3-208ENST00000586407 FAM161AQ3B820 660 aa35.73■■■■□ 3.31
LIG3-208ENST00000586407 CIAPIN1Q6FI81 312 aa35.73■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms