RNA–Protein interactions for RNA: ENST00000586134.5

ZNF540-203, Transcript of zinc finger protein 540, humanhuman

TSL 5

Gene ZNF540, Length 2,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-203ENST00000586134 NOM1Q5C9Z4 860 aaKnown RBP11.88□□□□□ -0.51
ZNF540-203ENST00000586134 CWC15Q9P013 229 aaKnown RBP11.88□□□□□ -0.51
ZNF540-203ENST00000586134 DIAPH1O60610 1272 aaKnown RBP11.87□□□□□ -0.51
ZNF540-203ENST00000586134 SSFA2P28290 1259 aa11.87□□□□□ -0.51
ZNF540-203ENST00000586134 NCBP1Q09161 790 aaKnown RBP11.87□□□□□ -0.51
ZNF540-203ENST00000586134 C1orf141Q5JVX7 400 aa11.87□□□□□ -0.51
ZNF540-203ENST00000586134 C22orf23Q9BZE7 217 aa11.87□□□□□ -0.51
ZNF540-203ENST00000586134 SUFUQ9UMX1 484 aa11.87□□□□□ -0.51
ZNF540-203ENST00000586134 CCDC189A1A4V9 331 aa11.87□□□□□ -0.51
ZNF540-203ENST00000586134 ATP2B1P20020 1258 aa11.87□□□□□ -0.51
ZNF540-203ENST00000586134 ANAPC15P60006 121 aa11.87□□□□□ -0.51
ZNF540-203ENST00000586134 AKAP4Q5JQC9 854 aa11.87□□□□□ -0.51
ZNF540-203ENST00000586134 CASC1Q6TDU7 716 aa11.87□□□□□ -0.51
ZNF540-203ENST00000586134 LRSAM1Q6UWE0 723 aa11.87□□□□□ -0.51
ZNF540-203ENST00000586134 SYT17Q9BSW7 474 aa11.87□□□□□ -0.51
ZNF540-203ENST00000586134 ATG3Q9NT62 314 aa11.87□□□□□ -0.51
ZNF540-203ENST00000586134 MAFGO15525 162 aa11.86□□□□□ -0.51
ZNF540-203ENST00000586134 TPM3P06753 285 aa11.86□□□□□ -0.51
ZNF540-203ENST00000586134 RC3H1Q5TC82 1133 aaKnown RBP11.86□□□□□ -0.51
ZNF540-203ENST00000586134 LRCH2Q5VUJ6 765 aa11.86□□□□□ -0.51
ZNF540-203ENST00000586134 COL23A1Q86Y22 540 aaPredicted RBP11.86□□□□□ -0.51
ZNF540-203ENST00000586134 FHDC1Q9C0D6 1143 aaPredicted RBP11.86□□□□□ -0.51
ZNF540-203ENST00000586134 KCNQ4P56696 695 aa11.86□□□□□ -0.51
ZNF540-203ENST00000586134 NOL10Q9BSC4 688 aaKnown RBP11.86□□□□□ -0.51
ZNF540-203ENST00000586134 ASAP1Q9ULH1 1129 aa11.86□□□□□ -0.51
ZNF540-203ENST00000586134 MYO1CO00159 1063 aa11.85□□□□□ -0.51
ZNF540-203ENST00000586134 SUGP1Q8IWZ8 645 aaKnown RBP11.85□□□□□ -0.51
ZNF540-203ENST00000586134 ITFG2Q969R8 447 aa11.85□□□□□ -0.51
ZNF540-203ENST00000586134 AK7Q96M32 723 aa11.85□□□□□ -0.51
ZNF540-203ENST00000586134 FAM210AQ96ND0 272 aa11.85□□□□□ -0.51
ZNF540-203ENST00000586134 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.85□□□□□ -0.51
ZNF540-203ENST00000586134 UBR2Q8IWV8 1755 aa11.85□□□□□ -0.51
ZNF540-203ENST00000586134 TJP1Q07157 1748 aa11.85□□□□□ -0.51
ZNF540-203ENST00000586134 SIPA1L3O60292 1781 aaPredicted RBP11.84□□□□□ -0.51
ZNF540-203ENST00000586134 CNTNAP4Q9C0A0 1308 aa11.84□□□□□ -0.51
ZNF540-203ENST00000586134 MYH14Q7Z406 1995 aaKnown RBP11.84□□□□□ -0.51
ZNF540-203ENST00000586134 LIG1P18858 919 aa11.84□□□□□ -0.51
ZNF540-203ENST00000586134 ATP6V1AP38606 617 aa11.84□□□□□ -0.51
ZNF540-203ENST00000586134 CABP4P57796 275 aa11.84□□□□□ -0.51
ZNF540-203ENST00000586134 UVSSAQ2YD98 709 aa11.84□□□□□ -0.51
ZNF540-203ENST00000586134 ZNF397Q8NF99 534 aaPredicted RBP11.84□□□□□ -0.51
ZNF540-203ENST00000586134 KIF13BQ9NQT8 1826 aa11.84□□□□□ -0.51
ZNF540-203ENST00000586134 CCDC196A0A1B0GTZ2 297 aa11.84□□□□□ -0.51
ZNF540-203ENST00000586134 KLHL33A6NCF5 533 aa11.84□□□□□ -0.51
ZNF540-203ENST00000586134 ADRA2BP18089 450 aa11.84□□□□□ -0.51
ZNF540-203ENST00000586134 RABEP1Q15276 862 aa11.84□□□□□ -0.51
ZNF540-203ENST00000586134 C11orf91Q3C1V1 193 aa11.84□□□□□ -0.51
ZNF540-203ENST00000586134 TEX35Q5T0J7 233 aa11.84□□□□□ -0.51
ZNF540-203ENST00000586134 JMYQ8N9B5 988 aa11.84□□□□□ -0.51
ZNF540-203ENST00000586134 KIF1BPQ96EK5 621 aa11.84□□□□□ -0.51
ZNF540-203ENST00000586134 TRERF1Q96PN7 1200 aa11.84□□□□□ -0.51
ZNF540-203ENST00000586134 ITPK1Q13572 414 aa11.83□□□□□ -0.52
ZNF540-203ENST00000586134 LINC00116Q8NCU8 138 aa11.83□□□□□ -0.52
ZNF540-203ENST00000586134 CDCA7LQ96GN5 454 aa11.83□□□□□ -0.52
ZNF540-203ENST00000586134 FAM177BA6PVY3 158 aa11.82□□□□□ -0.52
ZNF540-203ENST00000586134 BAG4O95429 457 aaKnown RBP11.82□□□□□ -0.52
ZNF540-203ENST00000586134 SLFNL1Q499Z3 407 aa11.82□□□□□ -0.52
ZNF540-203ENST00000586134 CC2D2BQ6DHV5 1058 aa11.82□□□□□ -0.52
ZNF540-203ENST00000586134 CFAP53Q96M91 514 aa11.82□□□□□ -0.52
ZNF540-203ENST00000586134 NBPF3Q9H094 633 aa11.82□□□□□ -0.52
ZNF540-203ENST00000586134 C4AP0C0L4 1744 aa11.82□□□□□ -0.52
ZNF540-203ENST00000586134 TTC31Q49AM3 519 aaPredicted RBP11.82□□□□□ -0.52
ZNF540-203ENST00000586134 CAVIN1Q6NZI2 390 aaKnown RBP11.82□□□□□ -0.52
ZNF540-203ENST00000586134 TACO1Q9BSH4 297 aaKnown RBP11.82□□□□□ -0.52
ZNF540-203ENST00000586134 MRVI1Q9Y6F6 885 aa11.82□□□□□ -0.52
ZNF540-203ENST00000586134 SMTNL1A8MU46 457 aa11.81□□□□□ -0.52
ZNF540-203ENST00000586134 FAM184AQ8NB25 1140 aa11.81□□□□□ -0.52
ZNF540-203ENST00000586134 CEP89Q96ST8 783 aa11.81□□□□□ -0.52
ZNF540-203ENST00000586134 SLC52A2Q9HAB3 445 aa11.81□□□□□ -0.52
ZNF540-203ENST00000586134 CD2APQ9Y5K6 639 aa11.81□□□□□ -0.52
ZNF540-203ENST00000586134 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.81□□□□□ -0.52
ZNF540-203ENST00000586134 RNMTO43148 476 aaKnown RBP11.81□□□□□ -0.52
ZNF540-203ENST00000586134 TMEM132AQ24JP5 1023 aa11.81□□□□□ -0.52
ZNF540-203ENST00000586134 GAS2L2Q8NHY3 880 aa11.81□□□□□ -0.52
ZNF540-203ENST00000586134 TBC1D22AQ8WUA7 517 aa11.81□□□□□ -0.52
ZNF540-203ENST00000586134 SLC4A9Q96Q91 983 aa11.81□□□□□ -0.52
ZNF540-203ENST00000586134 TMX1Q9H3N1 280 aa11.81□□□□□ -0.52
ZNF540-203ENST00000586134 C10orf67Q8IYJ2 551 aa11.8□□□□□ -0.52
ZNF540-203ENST00000586134 NFATC2IPQ8NCF5 419 aa11.8□□□□□ -0.52
ZNF540-203ENST00000586134 KCPQ6ZWJ8 1503 aa11.8□□□□□ -0.52
ZNF540-203ENST00000586134 RPS6KA4O75676 772 aa11.79□□□□□ -0.52
ZNF540-203ENST00000586134 HMOX1P09601 288 aa11.79□□□□□ -0.52
ZNF540-203ENST00000586134 GPS2Q13227 327 aa11.79□□□□□ -0.52
ZNF540-203ENST00000586134 MTHFSDQ2M296 383 aaKnown RBP11.79□□□□□ -0.52
ZNF540-203ENST00000586134 MCTP2Q6DN12 878 aa11.79□□□□□ -0.52
ZNF540-203ENST00000586134 SYT10Q6XYQ8 523 aa11.79□□□□□ -0.52
ZNF540-203ENST00000586134 DRC1Q96MC2 740 aa11.79□□□□□ -0.52
ZNF540-203ENST00000586134 TOMM22Q9NS69 142 aa11.79□□□□□ -0.52
ZNF540-203ENST00000586134 ZNF446Q9NWS9 450 aa11.79□□□□□ -0.52
ZNF540-203ENST00000586134 RTCBQ9Y3I0 505 aaKnown RBP11.79□□□□□ -0.52
ZNF540-203ENST00000586134 PAXBP1Q9Y5B6 917 aa11.79□□□□□ -0.52
ZNF540-203ENST00000586134 GNPATO15228 680 aa11.79□□□□□ -0.52
ZNF540-203ENST00000586134 PPP2R1AP30153 589 aa11.79□□□□□ -0.52
ZNF540-203ENST00000586134 BMS1Q14692 1282 aaKnown RBP11.79□□□□□ -0.52
ZNF540-203ENST00000586134 RNF20Q5VTR2 975 aa11.79□□□□□ -0.52
ZNF540-203ENST00000586134 PRDM16Q9HAZ2 1276 aa11.79□□□□□ -0.52
ZNF540-203ENST00000586134 IGHDP01880 384 aa11.78□□□□□ -0.52
ZNF540-203ENST00000586134 MAP2K2P36507 400 aa11.78□□□□□ -0.52
ZNF540-203ENST00000586134 MAGEA9P43362 315 aa11.78□□□□□ -0.52
ZNF540-203ENST00000586134 NUCB2P80303 420 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms