RNA–Protein interactions for RNA: ENST00000585400.1

NPHS1-203, Transcript of NPHS1, nephrin, humanhuman

TSL 1 (best)

Gene NPHS1, Length 999 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1-203ENST00000585400 SLC51AQ86UW1 340 aa28.51■■■□□ 2.15
NPHS1-203ENST00000585400 SRCIN1Q9C0H9 1055 aa28.51■■■□□ 2.15
NPHS1-203ENST00000585400 LTBP3Q9NS15 1303 aa28.5■■■□□ 2.15
NPHS1-203ENST00000585400 BBOX1O75936 387 aa28.5■■■□□ 2.15
NPHS1-203ENST00000585400 CC2D2BQ6DHV5 1058 aa28.5■■■□□ 2.15
NPHS1-203ENST00000585400 RTKN2Q8IZC4 609 aa28.5■■■□□ 2.15
NPHS1-203ENST00000585400 CCDC152Q4G0S7 254 aa28.49■■■□□ 2.15
NPHS1-203ENST00000585400 CCDC85AQ96PX6 553 aaPredicted RBP28.49■■■□□ 2.15
NPHS1-203ENST00000585400 FER1L6Q2WGJ9 1857 aa28.49■■■□□ 2.15
NPHS1-203ENST00000585400 ALDH1L1O75891 902 aa28.48■■■□□ 2.15
NPHS1-203ENST00000585400 BRPF1P55201 1214 aaPredicted RBP28.48■■■□□ 2.15
NPHS1-203ENST00000585400 CASP7P55210 303 aa28.48■■■□□ 2.15
NPHS1-203ENST00000585400 CTSWP56202 376 aa28.48■■■□□ 2.15
NPHS1-203ENST00000585400 FKBP4Q02790 459 aaKnown RBP eCLIP28.48■■■□□ 2.15
NPHS1-203ENST00000585400 NOB1Q9ULX3 412 aaKnown RBP28.48■■■□□ 2.15
NPHS1-203ENST00000585400 ATP6V0A2Q9Y487 856 aa28.48■■■□□ 2.15
NPHS1-203ENST00000585400 CELF1Q92879 486 aaKnown RBP28.47■■■□□ 2.15
NPHS1-203ENST00000585400 TMX4Q9H1E5 349 aaPredicted RBP28.47■■■□□ 2.15
NPHS1-203ENST00000585400 SEC31BQ9NQW1 1179 aa28.46■■■□□ 2.15
NPHS1-203ENST00000585400 SNED1Q8TER0 1413 aa28.45■■■□□ 2.15
NPHS1-203ENST00000585400 SBF1O95248 1867 aa28.45■■■□□ 2.15
NPHS1-203ENST00000585400 GRM8O00222 908 aa28.45■■■□□ 2.14
NPHS1-203ENST00000585400 SP8Q8IXZ3 490 aa28.45■■■□□ 2.14
NPHS1-203ENST00000585400 C9orf78Q9NZ63 289 aaPredicted RBP28.45■■■□□ 2.14
NPHS1-203ENST00000585400 TTLL11Q8NHH1 800 aa28.44■■■□□ 2.14
NPHS1-203ENST00000585400 PLA2G12BQ9BX93 195 aa28.44■■■□□ 2.14
NPHS1-203ENST00000585400 ZNF277Q9NRM2 450 aaPredicted RBP28.44■■■□□ 2.14
NPHS1-203ENST00000585400 GRIPAP1Q4V328 841 aa28.43■■■□□ 2.14
NPHS1-203ENST00000585400 TMC4Q7Z404 712 aa28.43■■■□□ 2.14
NPHS1-203ENST00000585400 KIF16BQ96L93 1317 aa28.43■■■□□ 2.14
NPHS1-203ENST00000585400 TAF1P21675 1872 aa28.42■■■□□ 2.14
NPHS1-203ENST00000585400 COL4A1P02462 1669 aa28.42■■■□□ 2.14
NPHS1-203ENST00000585400 BCAR3O75815 825 aa28.42■■■□□ 2.14
NPHS1-203ENST00000585400 RPS8P62241 208 aaKnown RBP28.42■■■□□ 2.14
NPHS1-203ENST00000585400 PSMD1Q99460 953 aa28.42■■■□□ 2.14
NPHS1-203ENST00000585400 API5Q9BZZ5 524 aaKnown RBP28.42■■■□□ 2.14
NPHS1-203ENST00000585400 GREM2Q9H772 168 aa28.41■■■□□ 2.14
NPHS1-203ENST00000585400 KIF3CO14782 793 aa28.39■■■□□ 2.14
NPHS1-203ENST00000585400 ZC3H4Q9UPT8 1303 aaKnown RBP28.39■■■□□ 2.13
NPHS1-203ENST00000585400 IARSP41252 1262 aaKnown RBP28.38■■■□□ 2.13
NPHS1-203ENST00000585400 DPP8Q6V1X1 898 aaPredicted RBP28.38■■■□□ 2.13
NPHS1-203ENST00000585400 ANKRD18AQ8IVF6 992 aa28.38■■■□□ 2.13
NPHS1-203ENST00000585400 MPNDQ8N594 471 aa28.38■■■□□ 2.13
NPHS1-203ENST00000585400 NMRK2Q9NPI5 230 aa28.38■■■□□ 2.13
NPHS1-203ENST00000585400 CCDC88AQ3V6T2 1871 aa28.38■■■□□ 2.13
NPHS1-203ENST00000585400 RTL9Q8NET4 1388 aa28.37■■■□□ 2.13
NPHS1-203ENST00000585400 CSF1RP07333 972 aa28.37■■■□□ 2.13
NPHS1-203ENST00000585400 FOXO4P98177 505 aa28.37■■■□□ 2.13
NPHS1-203ENST00000585400 ARHGAP45Q92619 1136 aa28.37■■■□□ 2.13
NPHS1-203ENST00000585400 FRAT1Q92837 279 aaPredicted RBP28.37■■■□□ 2.13
NPHS1-203ENST00000585400 CDC5LQ99459 802 aaKnown RBP28.37■■■□□ 2.13
NPHS1-203ENST00000585400 MYH3P11055 1940 aa28.36■■■□□ 2.13
NPHS1-203ENST00000585400 IPO8O15397 1037 aaKnown RBP28.36■■■□□ 2.13
NPHS1-203ENST00000585400 NBPF7P0C2Y1 421 aaPredicted RBP28.36■■■□□ 2.13
NPHS1-203ENST00000585400 CCT4P50991 539 aaKnown RBP28.36■■■□□ 2.13
NPHS1-203ENST00000585400 FAM161AQ3B820 660 aa28.36■■■□□ 2.13
NPHS1-203ENST00000585400 TIAM2Q8IVF5 1701 aa28.35■■■□□ 2.13
NPHS1-203ENST00000585400 EPHA10Q5JZY3 1008 aa28.35■■■□□ 2.13
NPHS1-203ENST00000585400 SUCLG2Q96I99 432 aa28.35■■■□□ 2.13
NPHS1-203ENST00000585400 CHMP3Q9Y3E7 222 aa28.35■■■□□ 2.13
NPHS1-203ENST00000585400 UTYO14607 1347 aa28.35■■■□□ 2.13
NPHS1-203ENST00000585400 ITGA6P23229 1130 aa28.34■■■□□ 2.13
NPHS1-203ENST00000585400 SUPT20HQ8NEM7 779 aa28.34■■■□□ 2.13
NPHS1-203ENST00000585400 RTFDC1Q9BY42 306 aaPredicted RBP28.34■■■□□ 2.13
NPHS1-203ENST00000585400 KDM2BQ8NHM5 1336 aa28.34■■■□□ 2.13
NPHS1-203ENST00000585400 LRRC37AA6NMS7 1700 aa28.33■■■□□ 2.13
NPHS1-203ENST00000585400 GPSM2P81274 684 aa28.33■■■□□ 2.13
NPHS1-203ENST00000585400 LMBR1LQ6UX01 489 aa28.33■■■□□ 2.13
NPHS1-203ENST00000585400 NSFL1CQ9UNZ2 370 aaKnown RBP28.33■■■□□ 2.13
NPHS1-203ENST00000585400 LARGE2Q8N3Y3 721 aa28.32■■■□□ 2.12
NPHS1-203ENST00000585400 USP44Q9H0E7 712 aa28.32■■■□□ 2.12
NPHS1-203ENST00000585400 DICER1Q9UPY3 1922 aaKnown RBP28.31■■■□□ 2.12
NPHS1-203ENST00000585400 PPIP5K2O43314 1243 aa28.31■■■□□ 2.12
NPHS1-203ENST00000585400 TRIM27P14373 513 aa28.31■■■□□ 2.12
NPHS1-203ENST00000585400 ATF7IPQ6VMQ6 1270 aa28.31■■■□□ 2.12
NPHS1-203ENST00000585400 C16orf71Q8IYS4 520 aaPredicted RBP28.31■■■□□ 2.12
NPHS1-203ENST00000585400 ANKRD18BA2A2Z9 1011 aa28.3■■■□□ 2.12
NPHS1-203ENST00000585400 IGHMBP2P38935 993 aaKnown RBP28.3■■■□□ 2.12
NPHS1-203ENST00000585400 AOC3Q16853 763 aa28.3■■■□□ 2.12
NPHS1-203ENST00000585400 JDP2Q8WYK2 163 aa28.3■■■□□ 2.12
NPHS1-203ENST00000585400 KAZALD1Q96I82 304 aa28.3■■■□□ 2.12
NPHS1-203ENST00000585400 TNNQ9UQP3 1299 aa28.3■■■□□ 2.12
NPHS1-203ENST00000585400 GLTPD2A6NH11 291 aa28.29■■■□□ 2.12
NPHS1-203ENST00000585400 IFIT5Q13325 482 aaKnown RBP28.29■■■□□ 2.12
NPHS1-203ENST00000585400 BSDC1Q9NW68 430 aaPredicted RBP28.29■■■□□ 2.12
NPHS1-203ENST00000585400 ZKSCAN2Q63HK3 967 aa28.28■■■□□ 2.12
NPHS1-203ENST00000585400 DPY19L2Q6NUT2 758 aa28.28■■■□□ 2.12
NPHS1-203ENST00000585400 ANKIB1Q9P2G1 1089 aa28.28■■■□□ 2.12
NPHS1-203ENST00000585400 DUOX1Q9NRD9 1551 aa28.28■■■□□ 2.12
NPHS1-203ENST00000585400 COL4A5P29400 1685 aa28.27■■■□□ 2.12
NPHS1-203ENST00000585400 C6orf229H3BNL8 230 aa28.27■■■□□ 2.12
NPHS1-203ENST00000585400 TOMM70O94826 608 aa28.27■■■□□ 2.12
NPHS1-203ENST00000585400 HSPA6P17066 643 aa28.27■■■□□ 2.12
NPHS1-203ENST00000585400 CLUAP1Q96AJ1 413 aa28.27■■■□□ 2.12
NPHS1-203ENST00000585400 YTHDC1Q96MU7 727 aaKnown RBP28.27■■■□□ 2.12
NPHS1-203ENST00000585400 VPS33BQ9H267 617 aa28.27■■■□□ 2.12
NPHS1-203ENST00000585400 BICC1Q9H694 974 aaKnown RBP28.27■■■□□ 2.12
NPHS1-203ENST00000585400 CCDC57Q2TAC2 916 aa28.26■■■□□ 2.11
NPHS1-203ENST00000585400 INTS3Q68E01 1043 aaKnown RBP28.26■■■□□ 2.11
NPHS1-203ENST00000585400 NIM1KQ8IY84 436 aa28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms