RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 ALDH1L2Q3SY69 923 aa29.42■■■□□ 2.3
LSM7-202ENST00000585395 ISCA1Q9BUE6 129 aa29.42■■■□□ 2.3
LSM7-202ENST00000585395 TMX4Q9H1E5 349 aaPredicted RBP29.42■■■□□ 2.3
LSM7-202ENST00000585395 WBP1LQ9NX94 342 aa29.42■■■□□ 2.3
LSM7-202ENST00000585395 ITGBL1O95965 494 aaPredicted RBP29.4■■■□□ 2.3
LSM7-202ENST00000585395 FLIIQ13045 1269 aa29.4■■■□□ 2.3
LSM7-202ENST00000585395 SLC10A5Q5PT55 438 aa29.4■■■□□ 2.3
LSM7-202ENST00000585395 RTL5Q5HYW3 569 aaPredicted RBP29.39■■■□□ 2.3
LSM7-202ENST00000585395 CRAMP1Q96RY5 1269 aa29.39■■■□□ 2.3
LSM7-202ENST00000585395 HOXA10P31260 410 aaPredicted RBP29.38■■■□□ 2.29
LSM7-202ENST00000585395 LBX1P52954 281 aa29.38■■■□□ 2.29
LSM7-202ENST00000585395 FKBP5Q13451 457 aaPredicted RBP29.38■■■□□ 2.29
LSM7-202ENST00000585395 KSR2Q6VAB6 950 aa29.38■■■□□ 2.29
LSM7-202ENST00000585395 C3orf67Q6ZVT6 689 aa29.38■■■□□ 2.29
LSM7-202ENST00000585395 RTKN2Q8IZC4 609 aa29.38■■■□□ 2.29
LSM7-202ENST00000585395 SYNE4Q8N205 404 aa29.38■■■□□ 2.29
LSM7-202ENST00000585395 FAM89AQ96GI7 184 aa29.38■■■□□ 2.29
LSM7-202ENST00000585395 MAP3K2Q9Y2U5 619 aa29.38■■■□□ 2.29
LSM7-202ENST00000585395 LAMB2P55268 1798 aa29.38■■■□□ 2.29
LSM7-202ENST00000585395 PPEF1O14829 653 aaPredicted RBP29.37■■■□□ 2.29
LSM7-202ENST00000585395 NEXNQ0ZGT2 675 aa29.37■■■□□ 2.29
LSM7-202ENST00000585395 DDX46Q7L014 1031 aaKnown RBP29.36■■■□□ 2.29
LSM7-202ENST00000585395 C7orf43Q8WVR3 580 aa29.36■■■□□ 2.29
LSM7-202ENST00000585395 METTL22Q9BUU2 404 aaPredicted RBP29.36■■■□□ 2.29
LSM7-202ENST00000585395 SMC4Q9NTJ3 1288 aa29.36■■■□□ 2.29
LSM7-202ENST00000585395 PI4KAP2A4QPH2 592 aa29.35■■■□□ 2.29
LSM7-202ENST00000585395 FKBP4Q02790 459 aaKnown RBP eCLIP29.35■■■□□ 2.29
LSM7-202ENST00000585395 TRIM28Q13263 835 aaKnown RBP29.35■■■□□ 2.29
LSM7-202ENST00000585395 CC2D2BQ6DHV5 1058 aa29.35■■■□□ 2.29
LSM7-202ENST00000585395 OLFM4Q6UX06 510 aa29.35■■■□□ 2.29
LSM7-202ENST00000585395 PI4KAP1Q8N8J0 262 aa29.35■■■□□ 2.29
LSM7-202ENST00000585395 HSP90B1P14625 803 aaKnown RBP29.34■■■□□ 2.29
LSM7-202ENST00000585395 CCDC191Q8NCU4 936 aa29.34■■■□□ 2.29
LSM7-202ENST00000585395 SSH1Q8WYL5 1049 aa29.34■■■□□ 2.29
LSM7-202ENST00000585395 CWC25Q9NXE8 425 aaPredicted RBP29.34■■■□□ 2.29
LSM7-202ENST00000585395 RASSF10A6NK89 507 aa29.33■■■□□ 2.29
LSM7-202ENST00000585395 IRS4O14654 1257 aaPredicted RBP29.33■■■□□ 2.29
LSM7-202ENST00000585395 EAPPQ56P03 285 aaPredicted RBP29.33■■■□□ 2.29
LSM7-202ENST00000585395 G2E3Q7L622 706 aa29.33■■■□□ 2.29
LSM7-202ENST00000585395 ABHD8Q96I13 439 aa29.33■■■□□ 2.29
LSM7-202ENST00000585395 YTHDC1Q96MU7 727 aaKnown RBP29.33■■■□□ 2.29
LSM7-202ENST00000585395 HACL1Q9UJ83 578 aa29.33■■■□□ 2.29
LSM7-202ENST00000585395 DDX60Q8IY21 1712 aaKnown RBP29.33■■■□□ 2.29
LSM7-202ENST00000585395 ABCC4O15439 1325 aa29.32■■■□□ 2.28
LSM7-202ENST00000585395 PTPRCP08575 1304 aa29.32■■■□□ 2.28
LSM7-202ENST00000585395 DEFB115Q30KQ5 88 aa29.32■■■□□ 2.28
LSM7-202ENST00000585395 MRPL50Q8N5N7 158 aaKnown RBP29.32■■■□□ 2.28
LSM7-202ENST00000585395 CLEC11AQ9Y240 323 aa29.32■■■□□ 2.28
LSM7-202ENST00000585395 MAP2K1Q02750 393 aaPredicted RBP29.31■■■□□ 2.28
LSM7-202ENST00000585395 PNMA8AQ86V59 439 aaPredicted RBP29.31■■■□□ 2.28
LSM7-202ENST00000585395 ZBTB38Q8NAP3 1195 aaPredicted RBP29.31■■■□□ 2.28
LSM7-202ENST00000585395 ZNF277Q9NRM2 450 aaPredicted RBP29.31■■■□□ 2.28
LSM7-202ENST00000585395 ADAMTSL1Q8N6G6 1762 aa29.31■■■□□ 2.28
LSM7-202ENST00000585395 HSPA8P11142 646 aaKnown RBP29.3■■■□□ 2.28
LSM7-202ENST00000585395 GRIPAP1Q4V328 841 aa29.3■■■□□ 2.28
LSM7-202ENST00000585395 EPHX2P34913 555 aa29.29■■■□□ 2.28
LSM7-202ENST00000585395 DNAAF4Q8WXU2 420 aa29.29■■■□□ 2.28
LSM7-202ENST00000585395 KIF16BQ96L93 1317 aa29.28■■■□□ 2.28
LSM7-202ENST00000585395 ZNF541Q9H0D2 1346 aa29.28■■■□□ 2.28
LSM7-202ENST00000585395 RARSP54136 660 aaKnown RBP29.28■■■□□ 2.28
LSM7-202ENST00000585395 FAM161AQ3B820 660 aa29.28■■■□□ 2.28
LSM7-202ENST00000585395 BBOX1O75936 387 aa29.27■■■□□ 2.28
LSM7-202ENST00000585395 PCCAP05165 728 aaPredicted RBP29.27■■■□□ 2.28
LSM7-202ENST00000585395 BRPF1P55201 1214 aaPredicted RBP29.27■■■□□ 2.28
LSM7-202ENST00000585395 GRAPQ13588 217 aa29.27■■■□□ 2.28
LSM7-202ENST00000585395 CNTROBQ8N137 903 aa29.27■■■□□ 2.28
LSM7-202ENST00000585395 GRAPLQ8TC17 118 aaPredicted RBP29.27■■■□□ 2.28
LSM7-202ENST00000585395 BCL2L13Q9BXK5 485 aa29.27■■■□□ 2.28
LSM7-202ENST00000585395 WDR33Q9C0J8 1336 aaKnown RBP29.26■■■□□ 2.27
LSM7-202ENST00000585395 IARSP41252 1262 aaKnown RBP29.26■■■□□ 2.27
LSM7-202ENST00000585395 PSMD1Q99460 953 aa29.26■■■□□ 2.27
LSM7-202ENST00000585395 JARID2Q92833 1246 aaPredicted RBP29.25■■■□□ 2.27
LSM7-202ENST00000585395 ATP6V0A2Q9Y487 856 aa29.25■■■□□ 2.27
LSM7-202ENST00000585395 TAF1P21675 1872 aa29.24■■■□□ 2.27
LSM7-202ENST00000585395 JDP2Q8WYK2 163 aa29.24■■■□□ 2.27
LSM7-202ENST00000585395 IPO8O15397 1037 aaKnown RBP29.23■■■□□ 2.27
LSM7-202ENST00000585395 SF3B3Q15393 1217 aaKnown RBP29.23■■■□□ 2.27
LSM7-202ENST00000585395 CWF19L2Q2TBE0 894 aaKnown RBP29.23■■■□□ 2.27
LSM7-202ENST00000585395 MAP1SQ66K74 1059 aaPredicted RBP29.23■■■□□ 2.27
LSM7-202ENST00000585395 LINS1Q8NG48 757 aa29.23■■■□□ 2.27
LSM7-202ENST00000585395 API5Q9BZZ5 524 aaKnown RBP29.23■■■□□ 2.27
LSM7-202ENST00000585395 ABT1Q9ULW3 272 aaKnown RBP29.23■■■□□ 2.27
LSM7-202ENST00000585395 PDE8AO60658 829 aa29.22■■■□□ 2.27
LSM7-202ENST00000585395 TMC4Q7Z404 712 aa29.22■■■□□ 2.27
LSM7-202ENST00000585395 GPC2Q8N158 579 aa29.22■■■□□ 2.27
LSM7-202ENST00000585395 NEURL1BA8MQ27 555 aa29.21■■■□□ 2.27
LSM7-202ENST00000585395 FZD9O00144 591 aa29.21■■■□□ 2.27
LSM7-202ENST00000585395 IGKV5-2P06315 115 aa29.21■■■□□ 2.27
LSM7-202ENST00000585395 CCDC152Q4G0S7 254 aa29.21■■■□□ 2.27
LSM7-202ENST00000585395 SP8Q8IXZ3 490 aa29.21■■■□□ 2.27
LSM7-202ENST00000585395 LARGE2Q8N3Y3 721 aa29.21■■■□□ 2.27
LSM7-202ENST00000585395 DPP8Q6V1X1 898 aaPredicted RBP29.2■■■□□ 2.26
LSM7-202ENST00000585395 MPNDQ8N594 471 aa29.2■■■□□ 2.26
LSM7-202ENST00000585395 SUPT20HQ8NEM7 779 aa29.2■■■□□ 2.26
LSM7-202ENST00000585395 ARHGAP45Q92619 1136 aa29.19■■■□□ 2.26
LSM7-202ENST00000585395 CCDC85AQ96PX6 553 aaPredicted RBP29.19■■■□□ 2.26
LSM7-202ENST00000585395 CDHR2Q9BYE9 1310 aa29.19■■■□□ 2.26
LSM7-202ENST00000585395 F6X3S4 739 aa29.18■■■□□ 2.26
LSM7-202ENST00000585395 MLLT1Q03111 559 aaPredicted RBP29.18■■■□□ 2.26
LSM7-202ENST00000585395 SLC4A10Q6U841 1118 aa29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms