RNA–Protein interactions for RNA: ENST00000585371.1

CHAF1A-202, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 5

Gene CHAF1A, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-202ENST00000585371 C16orf71Q8IYS4 520 aaPredicted RBP16.86■□□□□ 0.29
CHAF1A-202ENST00000585371 USP44Q9H0E7 712 aa16.86■□□□□ 0.29
CHAF1A-202ENST00000585371 RNF181Q9P0P0 153 aa16.86■□□□□ 0.29
CHAF1A-202ENST00000585371 NPHP1O15259 732 aa16.85■□□□□ 0.29
CHAF1A-202ENST00000585371 NBPF7P0C2Y1 421 aaPredicted RBP16.85■□□□□ 0.29
CHAF1A-202ENST00000585371 C2CD5Q86YS7 1000 aa16.85■□□□□ 0.29
CHAF1A-202ENST00000585371 TMEM57Q8N5G2 664 aa16.85■□□□□ 0.29
CHAF1A-202ENST00000585371 RBM46Q8TBY0 533 aaKnown RBP16.85■□□□□ 0.29
CHAF1A-202ENST00000585371 KAZALD1Q96I82 304 aa16.85■□□□□ 0.29
CHAF1A-202ENST00000585371 PLA2G12BQ9BX93 195 aa16.85■□□□□ 0.29
CHAF1A-202ENST00000585371 PDE8AO60658 829 aa16.84■□□□□ 0.29
CHAF1A-202ENST00000585371 SF3B3Q15393 1217 aaKnown RBP16.84■□□□□ 0.29
CHAF1A-202ENST00000585371 DZIP1LQ8IYY4 767 aaKnown RBP16.84■□□□□ 0.29
CHAF1A-202ENST00000585371 PDZRN3Q9UPQ7 1066 aa16.84■□□□□ 0.29
CHAF1A-202ENST00000585371 ZC3H4Q9UPT8 1303 aaKnown RBP16.84■□□□□ 0.29
CHAF1A-202ENST00000585371 HOXA10P31260 410 aaPredicted RBP16.83■□□□□ 0.28
CHAF1A-202ENST00000585371 FOXO4P98177 505 aa16.83■□□□□ 0.28
CHAF1A-202ENST00000585371 EPHA10Q5JZY3 1008 aa16.83■□□□□ 0.28
CHAF1A-202ENST00000585371 C20orf194Q5TEA3 1177 aa16.83■□□□□ 0.28
CHAF1A-202ENST00000585371 PANK1Q8TE04 598 aa16.83■□□□□ 0.28
CHAF1A-202ENST00000585371 NLRP3Q96P20 1036 aa16.83■□□□□ 0.28
CHAF1A-202ENST00000585371 SPEF2Q9C093 1822 aa16.82■□□□□ 0.28
CHAF1A-202ENST00000585371 WDR90Q96KV7 1748 aa16.82■□□□□ 0.28
CHAF1A-202ENST00000585371 H0YIN7 160 aa16.82■□□□□ 0.28
CHAF1A-202ENST00000585371 NPR1P16066 1061 aa16.82■□□□□ 0.28
CHAF1A-202ENST00000585371 STYK1Q6J9G0 422 aa16.82■□□□□ 0.28
CHAF1A-202ENST00000585371 SUCLG2Q96I99 432 aa16.82■□□□□ 0.28
CHAF1A-202ENST00000585371 MEIS3Q99687 375 aa16.82■□□□□ 0.28
CHAF1A-202ENST00000585371 C9orf78Q9NZ63 289 aaPredicted RBP16.82■□□□□ 0.28
CHAF1A-202ENST00000585371 CSF1RP07333 972 aa16.81■□□□□ 0.28
CHAF1A-202ENST00000585371 RRP1P56182 461 aaKnown RBP16.81■□□□□ 0.28
CHAF1A-202ENST00000585371 FSTL1Q12841 308 aa16.81■□□□□ 0.28
CHAF1A-202ENST00000585371 TTLL6Q8N841 843 aa16.81■□□□□ 0.28
CHAF1A-202ENST00000585371 TTLL11Q8NHH1 800 aa16.81■□□□□ 0.28
CHAF1A-202ENST00000585371 MASTLQ96GX5 879 aa16.81■□□□□ 0.28
CHAF1A-202ENST00000585371 LRRC37AA6NMS7 1700 aa16.8■□□□□ 0.28
CHAF1A-202ENST00000585371 CTSWP56202 376 aa16.8■□□□□ 0.28
CHAF1A-202ENST00000585371 PDE3AQ14432 1141 aa16.8■□□□□ 0.28
CHAF1A-202ENST00000585371 FER1L6Q2WGJ9 1857 aa16.8■□□□□ 0.28
CHAF1A-202ENST00000585371 RTL9Q8NET4 1388 aa16.79■□□□□ 0.28
CHAF1A-202ENST00000585371 LMNB1P20700 586 aa16.79■□□□□ 0.28
CHAF1A-202ENST00000585371 FTSJ3Q8IY81 847 aaKnown RBP16.79■□□□□ 0.28
CHAF1A-202ENST00000585371 ANKRD44Q8N8A2 993 aa16.79■□□□□ 0.28
CHAF1A-202ENST00000585371 ZNF622Q969S3 477 aaKnown RBP eCLIP16.79■□□□□ 0.285e-8■■■■□ 25.1
CHAF1A-202ENST00000585371 CRAMP1Q96RY5 1269 aa16.79■□□□□ 0.28
CHAF1A-202ENST00000585371 CCDC88AQ3V6T2 1871 aa16.79■□□□□ 0.28
CHAF1A-202ENST00000585371 ZBTB7BO15156 539 aaPredicted RBP16.78■□□□□ 0.28
CHAF1A-202ENST00000585371 HSP90B1P14625 803 aaKnown RBP16.78■□□□□ 0.28
CHAF1A-202ENST00000585371 RASSF7Q02833 373 aa16.78■□□□□ 0.28
CHAF1A-202ENST00000585371 RABL6Q3YEC7 729 aaPredicted RBP16.78■□□□□ 0.28
CHAF1A-202ENST00000585371 SLC51AQ86UW1 340 aa16.78■□□□□ 0.28
CHAF1A-202ENST00000585371 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.78■□□□□ 0.28
CHAF1A-202ENST00000585371 C7orf43Q8WVR3 580 aa16.78■□□□□ 0.28
CHAF1A-202ENST00000585371 RRAGCQ9HB90 399 aa16.78■□□□□ 0.28
CHAF1A-202ENST00000585371 SEC31BQ9NQW1 1179 aa16.78■□□□□ 0.28
CHAF1A-202ENST00000585371 A0A1B0GUL6 1792 aa16.77■□□□□ 0.28
CHAF1A-202ENST00000585371 TIAM2Q8IVF5 1701 aa16.77■□□□□ 0.28
CHAF1A-202ENST00000585371 MS4A1P11836 297 aa16.77■□□□□ 0.28
CHAF1A-202ENST00000585371 MVPQ14764 893 aaKnown RBP16.77■□□□□ 0.28
CHAF1A-202ENST00000585371 DNAJC5GQ8N7S2 189 aa16.77■□□□□ 0.28
CHAF1A-202ENST00000585371 CNKSR1Q969H4 720 aa16.77■□□□□ 0.28
CHAF1A-202ENST00000585371 BICC1Q9H694 974 aaKnown RBP16.77■□□□□ 0.28
CHAF1A-202ENST00000585371 COG6Q9Y2V7 657 aa16.77■□□□□ 0.28
CHAF1A-202ENST00000585371 SNED1Q8TER0 1413 aa16.77■□□□□ 0.27
CHAF1A-202ENST00000585371 PRPF40BQ6NWY9 871 aaKnown RBP16.76■□□□□ 0.27
CHAF1A-202ENST00000585371 ITPRIPQ8IWB1 547 aa16.76■□□□□ 0.27
CHAF1A-202ENST00000585371 RPGRQ92834 1020 aaKnown RBP16.76■□□□□ 0.27
CHAF1A-202ENST00000585371 CELF1Q92879 486 aaKnown RBP16.76■□□□□ 0.27
CHAF1A-202ENST00000585371 RBM17Q96I25 401 aaKnown RBP16.76■□□□□ 0.27
CHAF1A-202ENST00000585371 CCDC85AQ96PX6 553 aaPredicted RBP16.76■□□□□ 0.27
CHAF1A-202ENST00000585371 GREM2Q9H772 168 aa16.76■□□□□ 0.27
CHAF1A-202ENST00000585371 LTBP1Q14766 1721 aa16.76■□□□□ 0.27
CHAF1A-202ENST00000585371 UBTFL1P0CB47 393 aaPredicted RBP16.75■□□□□ 0.27
CHAF1A-202ENST00000585371 ALDH1B1P30837 517 aa16.75■□□□□ 0.27
CHAF1A-202ENST00000585371 FAM161AQ3B820 660 aa16.75■□□□□ 0.27
CHAF1A-202ENST00000585371 CCDC152Q4G0S7 254 aa16.75■□□□□ 0.27
CHAF1A-202ENST00000585371 LMBR1LQ6UX01 489 aa16.75■□□□□ 0.27
CHAF1A-202ENST00000585371 SMC1BQ8NDV3 1235 aa16.75■□□□□ 0.27
CHAF1A-202ENST00000585371 SUPT16HQ9Y5B9 1047 aaKnown RBP16.75■□□□□ 0.27
CHAF1A-202ENST00000585371 LRRFIP2Q9Y608 721 aaKnown RBP16.75■□□□□ 0.27
CHAF1A-202ENST00000585371 DICER1Q9UPY3 1922 aaKnown RBP16.74■□□□□ 0.27
CHAF1A-202ENST00000585371 GLTPD2A6NH11 291 aa16.74■□□□□ 0.27
CHAF1A-202ENST00000585371 GNAI3P08754 354 aa16.74■□□□□ 0.27
CHAF1A-202ENST00000585371 GRAPQ13588 217 aa16.74■□□□□ 0.27
CHAF1A-202ENST00000585371 DDX46Q7L014 1031 aaKnown RBP16.74■□□□□ 0.27
CHAF1A-202ENST00000585371 GRAPLQ8TC17 118 aaPredicted RBP16.74■□□□□ 0.27
CHAF1A-202ENST00000585371 VEGFAP15692 232 aaPredicted RBP16.73■□□□□ 0.27
CHAF1A-202ENST00000585371 NFKBIEO00221 500 aa16.72■□□□□ 0.27
CHAF1A-202ENST00000585371 ITGA6P23229 1130 aa16.72■□□□□ 0.27
CHAF1A-202ENST00000585371 RFX5P48382 616 aaPredicted RBP16.72■□□□□ 0.27
CHAF1A-202ENST00000585371 PRELPP51888 382 aa16.72■□□□□ 0.27
CHAF1A-202ENST00000585371 OLFM4Q6UX06 510 aa16.72■□□□□ 0.27
CHAF1A-202ENST00000585371 KLRG1Q96E93 195 aa16.72■□□□□ 0.27
CHAF1A-202ENST00000585371 DDX19BQ9UMR2 479 aa16.72■□□□□ 0.27
CHAF1A-202ENST00000585371 C21orf2O43822 256 aa16.71■□□□□ 0.27
CHAF1A-202ENST00000585371 BBOX1O75936 387 aa16.71■□□□□ 0.27
CHAF1A-202ENST00000585371 RPS8P62241 208 aaKnown RBP16.71■□□□□ 0.27
CHAF1A-202ENST00000585371 MTX1Q13505 466 aa16.71■□□□□ 0.27
CHAF1A-202ENST00000585371 ZBTB40Q9NUA8 1239 aa16.71■□□□□ 0.27
CHAF1A-202ENST00000585371 DUOX1Q9NRD9 1551 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms