RNA–Protein interactions for RNA: ENST00000585096.1

SRSF1-209, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 4 BASIC

Gene SRSF1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-209ENST00000585096 SLC4A2P04920 1241 aa22.94■■□□□ 1.26
SRSF1-209ENST00000585096 MPNDQ8N594 471 aa22.94■■□□□ 1.26
SRSF1-209ENST00000585096 PI4KAP2A4QPH2 592 aa22.93■■□□□ 1.26
SRSF1-209ENST00000585096 PPIP5K2O43314 1243 aa22.93■■□□□ 1.26
SRSF1-209ENST00000585096 PCCAP05165 728 aaPredicted RBP22.93■■□□□ 1.26
SRSF1-209ENST00000585096 NEXNQ0ZGT2 675 aa22.93■■□□□ 1.26
SRSF1-209ENST00000585096 SLC51AQ86UW1 340 aa22.93■■□□□ 1.26
SRSF1-209ENST00000585096 GPC2Q8N158 579 aa22.93■■□□□ 1.26
SRSF1-209ENST00000585096 PI4KAP1Q8N8J0 262 aa22.93■■□□□ 1.26
SRSF1-209ENST00000585096 RTFDC1Q9BY42 306 aaPredicted RBP22.93■■□□□ 1.26
SRSF1-209ENST00000585096 NIM1KQ8IY84 436 aa22.92■■□□□ 1.26
SRSF1-209ENST00000585096 MYH16Q9H6N6 1097 aa22.92■■□□□ 1.26
SRSF1-209ENST00000585096 TAF1DQ9H5J8 278 aaPredicted RBP22.91■■□□□ 1.26
SRSF1-209ENST00000585096 HACL1Q9UJ83 578 aa22.91■■□□□ 1.26
SRSF1-209ENST00000585096 EXOSC9Q06265 439 aaKnown RBP22.9■■□□□ 1.26
SRSF1-209ENST00000585096 AOC3Q16853 763 aa22.9■■□□□ 1.26
SRSF1-209ENST00000585096 CHADLQ6NUI6 762 aa22.9■■□□□ 1.26
SRSF1-209ENST00000585096 VAMP4O75379 141 aa22.89■■□□□ 1.25
SRSF1-209ENST00000585096 G2E3Q7L622 706 aa22.89■■□□□ 1.25
SRSF1-209ENST00000585096 CELF1Q92879 486 aaKnown RBP22.89■■□□□ 1.25
SRSF1-209ENST00000585096 GJA3Q9Y6H8 435 aa22.89■■□□□ 1.25
SRSF1-209ENST00000585096 CEP350Q5VT06 3117 aa22.88■■□□□ 1.25
SRSF1-209ENST00000585096 PDE8AO60658 829 aa22.88■■□□□ 1.25
SRSF1-209ENST00000585096 FLIIQ13045 1269 aa22.88■■□□□ 1.25
SRSF1-209ENST00000585096 CCDC152Q4G0S7 254 aa22.88■■□□□ 1.25
SRSF1-209ENST00000585096 IGKV5-2P06315 115 aa22.87■■□□□ 1.25
SRSF1-209ENST00000585096 EPHX2P34913 555 aa22.87■■□□□ 1.25
SRSF1-209ENST00000585096 RPS8P62241 208 aaKnown RBP22.87■■□□□ 1.25
SRSF1-209ENST00000585096 PNMA8AQ86V59 439 aaPredicted RBP22.87■■□□□ 1.25
SRSF1-209ENST00000585096 LDHDQ86WU2 507 aa22.87■■□□□ 1.25
SRSF1-209ENST00000585096 ZNRF3Q9ULT6 936 aa22.87■■□□□ 1.25
SRSF1-209ENST00000585096 LMOD1P29536 600 aaPredicted RBP22.86■■□□□ 1.25
SRSF1-209ENST00000585096 KIAA2012Q0VF49 1180 aa22.86■■□□□ 1.25
SRSF1-209ENST00000585096 FKBP5Q13451 457 aaPredicted RBP22.86■■□□□ 1.25
SRSF1-209ENST00000585096 DNAJC5GQ8N7S2 189 aa22.86■■□□□ 1.25
SRSF1-209ENST00000585096 JARID2Q92833 1246 aaPredicted RBP22.86■■□□□ 1.25
SRSF1-209ENST00000585096 SPINK5Q9NQ38 1064 aaPredicted RBP22.86■■□□□ 1.25
SRSF1-209ENST00000585096 NSFL1CQ9UNZ2 370 aaKnown RBP22.86■■□□□ 1.25
SRSF1-209ENST00000585096 CDHR2Q9BYE9 1310 aa22.85■■□□□ 1.25
SRSF1-209ENST00000585096 POTEIP0CG38 1075 aa22.85■■□□□ 1.25
SRSF1-209ENST00000585096 POTEJP0CG39 1038 aa22.85■■□□□ 1.25
SRSF1-209ENST00000585096 EAPPQ56P03 285 aaPredicted RBP22.85■■□□□ 1.25
SRSF1-209ENST00000585096 COL4A5P29400 1685 aa22.84■■□□□ 1.25
SRSF1-209ENST00000585096 NEURL1BA8MQ27 555 aa22.84■■□□□ 1.25
SRSF1-209ENST00000585096 HTRA3P83110 453 aa22.84■■□□□ 1.25
SRSF1-209ENST00000585096 CLEC11AQ9Y240 323 aa22.84■■□□□ 1.25
SRSF1-209ENST00000585096 LAMB2P55268 1798 aa22.84■■□□□ 1.25
SRSF1-209ENST00000585096 CWF19L2Q2TBE0 894 aaKnown RBP22.83■■□□□ 1.25
SRSF1-209ENST00000585096 SEC31BQ9NQW1 1179 aa22.83■■□□□ 1.25
SRSF1-209ENST00000585096 DDX60Q8IY21 1712 aaKnown RBP22.82■■□□□ 1.24
SRSF1-209ENST00000585096 GPSM2P81274 684 aa22.82■■□□□ 1.24
SRSF1-209ENST00000585096 WASHC4Q2M389 1173 aa22.82■■□□□ 1.24
SRSF1-209ENST00000585096 DNAAF4Q8WXU2 420 aa22.82■■□□□ 1.24
SRSF1-209ENST00000585096 C6orf229H3BNL8 230 aa22.81■■□□□ 1.24
SRSF1-209ENST00000585096 CXCL9Q07325 125 aa22.81■■□□□ 1.24
SRSF1-209ENST00000585096 KLRG1Q96E93 195 aa22.81■■□□□ 1.24
SRSF1-209ENST00000585096 CCDC85AQ96PX6 553 aaPredicted RBP22.81■■□□□ 1.24
SRSF1-209ENST00000585096 EYA3Q99504 573 aa22.81■■□□□ 1.24
SRSF1-209ENST00000585096 ZNF521Q96K83 1311 aa22.81■■□□□ 1.24
SRSF1-209ENST00000585096 H7C1W4 665 aa22.8■■□□□ 1.24
SRSF1-209ENST00000585096 SCNN1DP51172 638 aa22.8■■□□□ 1.24
SRSF1-209ENST00000585096 CTSWP56202 376 aa22.8■■□□□ 1.24
SRSF1-209ENST00000585096 TNIP1Q15025 636 aa22.8■■□□□ 1.24
SRSF1-209ENST00000585096 LINS1Q8NG48 757 aa22.8■■□□□ 1.24
SRSF1-209ENST00000585096 SCN4AP35499 1836 aa22.8■■□□□ 1.24
SRSF1-209ENST00000585096 GCKRQ14397 625 aa22.79■■□□□ 1.24
SRSF1-209ENST00000585096 CIAPIN1Q6FI81 312 aa22.79■■□□□ 1.24
SRSF1-209ENST00000585096 UBE3BQ7Z3V4 1068 aa22.79■■□□□ 1.24
SRSF1-209ENST00000585096 ANKRD18AQ8IVF6 992 aa22.79■■□□□ 1.24
SRSF1-209ENST00000585096 CDC5LQ99459 802 aaKnown RBP22.79■■□□□ 1.24
SRSF1-209ENST00000585096 EPS15P42566 896 aa22.78■■□□□ 1.24
SRSF1-209ENST00000585096 TTLL11Q8NHH1 800 aa22.78■■□□□ 1.24
SRSF1-209ENST00000585096 TBC1D16Q8TBP0 767 aa22.78■■□□□ 1.24
SRSF1-209ENST00000585096 PODXL2Q9NZ53 605 aa22.78■■□□□ 1.24
SRSF1-209ENST00000585096 ANKIB1Q9P2G1 1089 aa22.78■■□□□ 1.24
SRSF1-209ENST00000585096 POLLQ9UGP5 575 aa22.78■■□□□ 1.24
SRSF1-209ENST00000585096 RIMBP2O15034 1052 aa22.77■■□□□ 1.24
SRSF1-209ENST00000585096 USP50Q70EL3 339 aaPredicted RBP22.77■■□□□ 1.24
SRSF1-209ENST00000585096 RAD17O75943 681 aa22.76■■□□□ 1.23
SRSF1-209ENST00000585096 ZC3H12CQ9C0D7 883 aaKnown RBP22.76■■□□□ 1.23
SRSF1-209ENST00000585096 GPRC5DQ9NZD1 345 aa22.76■■□□□ 1.23
SRSF1-209ENST00000585096 E9PSI1 815 aa22.75■■□□□ 1.23
SRSF1-209ENST00000585096 CCER2I3L3R5 266 aa22.75■■□□□ 1.23
SRSF1-209ENST00000585096 GMPSP49915 693 aaPredicted RBP22.75■■□□□ 1.23
SRSF1-209ENST00000585096 CNTROBQ8N137 903 aa22.75■■□□□ 1.23
SRSF1-209ENST00000585096 BCL2L13Q9BXK5 485 aa22.75■■□□□ 1.23
SRSF1-209ENST00000585096 GREM2Q9H772 168 aa22.75■■□□□ 1.23
SRSF1-209ENST00000585096 CREBZFQ9NS37 354 aa22.75■■□□□ 1.23
SRSF1-209ENST00000585096 ADARB2Q9NS39 739 aaKnown RBP22.75■■□□□ 1.23
SRSF1-209ENST00000585096 GGA1Q9UJY5 639 aa22.75■■□□□ 1.23
SRSF1-209ENST00000585096 PASKQ96RG2 1323 aa22.75■■□□□ 1.23
SRSF1-209ENST00000585096 DUOX1Q9NRD9 1551 aa22.75■■□□□ 1.23
SRSF1-209ENST00000585096 LRRC37AA6NMS7 1700 aa22.74■■□□□ 1.23
SRSF1-209ENST00000585096 UFL1O94874 794 aa22.74■■□□□ 1.23
SRSF1-209ENST00000585096 ITGBL1O95965 494 aaPredicted RBP22.74■■□□□ 1.23
SRSF1-209ENST00000585096 MAP1SQ66K74 1059 aaPredicted RBP22.74■■□□□ 1.23
SRSF1-209ENST00000585096 PLA2G12BQ9BX93 195 aa22.74■■□□□ 1.23
SRSF1-209ENST00000585096 DBNDD1Q9H9R9 158 aa22.74■■□□□ 1.23
SRSF1-209ENST00000585096 RTL9Q8NET4 1388 aa22.74■■□□□ 1.23
SRSF1-209ENST00000585096 YDJCA8MPS7 323 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms