RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 LRFN2Q9ULH4 789 aa6.41□□□□□ -1.38
VAPA-208ENST00000584796 ZBTB42B2RXF5 422 aa6.4□□□□□ -1.38
VAPA-208ENST00000584796 OPLAHO14841 1288 aa6.4□□□□□ -1.38
VAPA-208ENST00000584796 EGFRP00533 1210 aa6.4□□□□□ -1.38
VAPA-208ENST00000584796 TARSP26639 723 aaKnown RBP6.4□□□□□ -1.38
VAPA-208ENST00000584796 GPLD1P80108 840 aa6.4□□□□□ -1.38
VAPA-208ENST00000584796 NRG1Q02297 640 aaPredicted RBP6.4□□□□□ -1.38
VAPA-208ENST00000584796 GRIK5Q16478 980 aa6.4□□□□□ -1.38
VAPA-208ENST00000584796 DHX32Q7L7V1 743 aaKnown RBP6.4□□□□□ -1.38
VAPA-208ENST00000584796 VTI1AQ96AJ9 217 aa6.4□□□□□ -1.38
VAPA-208ENST00000584796 ZNF777Q9ULD5 760 aaPredicted RBP6.4□□□□□ -1.38
VAPA-208ENST00000584796 CPB1P15086 417 aa6.39□□□□□ -1.39
VAPA-208ENST00000584796 SWI5Q1ZZU3 235 aa6.39□□□□□ -1.39
VAPA-208ENST00000584796 FOXD4L6Q3SYB3 417 aaPredicted RBP6.39□□□□□ -1.39
VAPA-208ENST00000584796 PERM1Q5SV97 790 aa6.39□□□□□ -1.39
VAPA-208ENST00000584796 ZMYM1Q5SVZ6 1142 aa6.39□□□□□ -1.39
VAPA-208ENST00000584796 MSL1Q68DK7 614 aa6.39□□□□□ -1.39
VAPA-208ENST00000584796 SHISA2Q6UWI4 295 aa6.39□□□□□ -1.39
VAPA-208ENST00000584796 FOXD4L3Q6VB84 417 aaPredicted RBP6.39□□□□□ -1.39
VAPA-208ENST00000584796 KRT25Q7Z3Z0 450 aa6.39□□□□□ -1.39
VAPA-208ENST00000584796 TXNRD3Q86VQ6 643 aa6.39□□□□□ -1.39
VAPA-208ENST00000584796 DMRTC2Q8IXT2 367 aaPredicted RBP6.39□□□□□ -1.39
VAPA-208ENST00000584796 TTC9Q92623 222 aa6.39□□□□□ -1.39
VAPA-208ENST00000584796 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.39□□□□□ -1.392e-7■■■■□ 21.2
VAPA-208ENST00000584796 NOVA2Q9UNW9 492 aaKnown RBP6.39□□□□□ -1.39
VAPA-208ENST00000584796 SASH3O75995 380 aa6.38□□□□□ -1.39
VAPA-208ENST00000584796 RARAP10276 462 aa6.38□□□□□ -1.39
VAPA-208ENST00000584796 NRLP54845 237 aa6.38□□□□□ -1.39
VAPA-208ENST00000584796 FKBP5Q13451 457 aaPredicted RBP6.38□□□□□ -1.39
VAPA-208ENST00000584796 DTWD1Q8N5C7 304 aa6.38□□□□□ -1.39
VAPA-208ENST00000584796 RTCBQ9Y3I0 505 aaKnown RBP6.38□□□□□ -1.39
VAPA-208ENST00000584796 ACIN1Q9UKV3 1341 aaKnown RBP6.38□□□□□ -1.39
VAPA-208ENST00000584796 H2AFB1P0C5Y9 115 aa6.37□□□□□ -1.39
VAPA-208ENST00000584796 H2AFB2P0C5Z0 115 aa6.37□□□□□ -1.39
VAPA-208ENST00000584796 RFX1P22670 979 aa6.37□□□□□ -1.39
VAPA-208ENST00000584796 PLAURQ03405 335 aa6.37□□□□□ -1.39
VAPA-208ENST00000584796 ELOAQ14241 798 aaKnown RBP6.37□□□□□ -1.39
VAPA-208ENST00000584796 OCLNQ16625 522 aa6.37□□□□□ -1.39
VAPA-208ENST00000584796 CDCA8Q53HL2 280 aa6.37□□□□□ -1.39
VAPA-208ENST00000584796 COX20Q5RI15 118 aa6.37□□□□□ -1.39
VAPA-208ENST00000584796 FBXO11Q86XK2 927 aa6.37□□□□□ -1.39
VAPA-208ENST00000584796 TREML1Q86YW5 311 aa6.37□□□□□ -1.39
VAPA-208ENST00000584796 SSBP4Q9BWG4 385 aaPredicted RBP6.37□□□□□ -1.39
VAPA-208ENST00000584796 ZMIZ1Q9ULJ6 1067 aa6.37□□□□□ -1.39
VAPA-208ENST00000584796 HOXD8P13378 290 aaPredicted RBP6.36□□□□□ -1.39
VAPA-208ENST00000584796 MLLT1Q03111 559 aaPredicted RBP6.36□□□□□ -1.39
VAPA-208ENST00000584796 FAM69CQ0P6D2 419 aa6.36□□□□□ -1.39
VAPA-208ENST00000584796 PRSS36Q5K4E3 855 aa6.36□□□□□ -1.39
VAPA-208ENST00000584796 ELMSAN1Q6PJG2 1045 aa6.36□□□□□ -1.39
VAPA-208ENST00000584796 TLR7Q9NYK1 1049 aaKnown RBP6.36□□□□□ -1.39
VAPA-208ENST00000584796 USP20Q9Y2K6 914 aa6.36□□□□□ -1.39
VAPA-208ENST00000584796 KCNMB2Q9Y691 235 aa6.36□□□□□ -1.39
VAPA-208ENST00000584796 XYLBO75191 536 aa6.35□□□□□ -1.39
VAPA-208ENST00000584796 ARID4AP29374 1257 aaPredicted RBP6.35□□□□□ -1.39
VAPA-208ENST00000584796 SRPK2P78362 688 aaKnown RBP6.35□□□□□ -1.39
VAPA-208ENST00000584796 RGL4Q8IZJ4 473 aa6.35□□□□□ -1.39
VAPA-208ENST00000584796 COL26A1Q96A83 441 aa6.35□□□□□ -1.39
VAPA-208ENST00000584796 PRIMPOLQ96LW4 560 aa6.35□□□□□ -1.39
VAPA-208ENST00000584796 USP21Q9UK80 565 aa6.35□□□□□ -1.39
VAPA-208ENST00000584796 PRMT3O60678 531 aa6.34□□□□□ -1.39
VAPA-208ENST00000584796 WFDC8Q8IUA0 241 aa6.34□□□□□ -1.39
VAPA-208ENST00000584796 ETFBKMTQ8IXQ9 262 aa6.34□□□□□ -1.39
VAPA-208ENST00000584796 SMG9Q9H0W8 520 aaKnown RBP6.34□□□□□ -1.39
VAPA-208ENST00000584796 DEAF1O75398 565 aaPredicted RBP6.33□□□□□ -1.4
VAPA-208ENST00000584796 SOX18P35713 384 aa6.33□□□□□ -1.4
VAPA-208ENST00000584796 HFE2Q6ZVN8 426 aa6.33□□□□□ -1.4
VAPA-208ENST00000584796 CMTR1Q8N1G2 835 aaKnown RBP6.33□□□□□ -1.4
VAPA-208ENST00000584796 STK32AQ8WU08 396 aa6.33□□□□□ -1.4
VAPA-208ENST00000584796 SAP130Q9H0E3 1048 aa6.33□□□□□ -1.4
VAPA-208ENST00000584796 TNFRSF10BO14763 440 aa6.32□□□□□ -1.4
VAPA-208ENST00000584796 MMP20O60882 483 aa6.32□□□□□ -1.4
VAPA-208ENST00000584796 PSAPP07602 524 aa6.32□□□□□ -1.4
VAPA-208ENST00000584796 EIF2AK2P19525 551 aaKnown RBP6.32□□□□□ -1.4
VAPA-208ENST00000584796 C16orf46Q6P387 395 aa6.32□□□□□ -1.4
VAPA-208ENST00000584796 IGF2-ASQ6U949 168 aa6.32□□□□□ -1.4
VAPA-208ENST00000584796 TP53INP1Q96A56 240 aa6.32□□□□□ -1.4
VAPA-208ENST00000584796 PLD4Q96BZ4 506 aa6.32□□□□□ -1.4
VAPA-208ENST00000584796 CXXC1Q9P0U4 656 aaPredicted RBP6.32□□□□□ -1.4
VAPA-208ENST00000584796 LOC102724428A0A0B4J2F2 783 aa6.31□□□□□ -1.4
VAPA-208ENST00000584796 DLL1O00548 723 aa6.31□□□□□ -1.4
VAPA-208ENST00000584796 ATG7O95352 703 aa6.31□□□□□ -1.4
VAPA-208ENST00000584796 BRD2P25440 801 aaKnown RBP6.31□□□□□ -1.4
VAPA-208ENST00000584796 NOS3P29474 1203 aa6.31□□□□□ -1.4
VAPA-208ENST00000584796 SIK1P57059 783 aa6.31□□□□□ -1.4
VAPA-208ENST00000584796 TRIP4Q15650 581 aaPredicted RBP6.31□□□□□ -1.4
VAPA-208ENST00000584796 FAM26DQ5JW98 314 aa6.31□□□□□ -1.4
VAPA-208ENST00000584796 ARTNQ5T4W7 220 aa6.31□□□□□ -1.4
VAPA-208ENST00000584796 WFDC12Q8WWY7 111 aa6.31□□□□□ -1.4
VAPA-208ENST00000584796 KRTAP4-8Q9BYQ9 185 aa6.31□□□□□ -1.4
VAPA-208ENST00000584796 SCO2A0A1W2PP80 73 aa6.3□□□□□ -1.4
VAPA-208ENST00000584796 J3QW42 95 aa6.3□□□□□ -1.4
VAPA-208ENST00000584796 CAPN12Q6ZSI9 719 aa6.3□□□□□ -1.4
VAPA-208ENST00000584796 NLRP13Q86W25 1043 aa6.3□□□□□ -1.4
VAPA-208ENST00000584796 NSUN5Q96P11 429 aaKnown RBP6.3□□□□□ -1.4
VAPA-208ENST00000584796 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.29□□□□□ -1.4
VAPA-208ENST00000584796 IREB2P48200 963 aaKnown RBP6.29□□□□□ -1.4
VAPA-208ENST00000584796 TMEM164Q5U3C3 297 aa6.29□□□□□ -1.4
VAPA-208ENST00000584796 SRA1Q9HD15 236 aaKnown RBP6.29□□□□□ -1.4
VAPA-208ENST00000584796 PTCD1O75127 700 aaKnown RBP6.28□□□□□ -1.4
VAPA-208ENST00000584796 GHRHP01286 108 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms