RNA–Protein interactions for RNA: ENST00000584717.1

CCDC57-219, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-219ENST00000584717 CHPF2Q9P2E5 772 aa21.68■■□□□ 1.06
CCDC57-219ENST00000584717 SH3TC1Q8TE82 1336 aa21.67■■□□□ 1.06
CCDC57-219ENST00000584717 CHL1O00533 1208 aa21.67■■□□□ 1.06
CCDC57-219ENST00000584717 GMPSP49915 693 aaPredicted RBP21.67■■□□□ 1.06
CCDC57-219ENST00000584717 GRM1Q13255 1194 aa21.67■■□□□ 1.06
CCDC57-219ENST00000584717 GRAPQ13588 217 aa21.67■■□□□ 1.06
CCDC57-219ENST00000584717 GRAPLQ8TC17 118 aaPredicted RBP21.67■■□□□ 1.06
CCDC57-219ENST00000584717 THSD7BQ9C0I4 1608 aa21.66■■□□□ 1.06
CCDC57-219ENST00000584717 MYBBP1AQ9BQG0 1328 aaKnown RBP21.66■■□□□ 1.06
CCDC57-219ENST00000584717 HSPA8P11142 646 aaKnown RBP21.66■■□□□ 1.06
CCDC57-219ENST00000584717 MAP2K1Q02750 393 aaPredicted RBP21.66■■□□□ 1.06
CCDC57-219ENST00000584717 KIAA2012Q0VF49 1180 aa21.66■■□□□ 1.06
CCDC57-219ENST00000584717 CST9Q5W186 159 aa21.66■■□□□ 1.06
CCDC57-219ENST00000584717 CAPNS2Q96L46 248 aa21.66■■□□□ 1.06
CCDC57-219ENST00000584717 TRIM35Q9UPQ4 493 aa21.66■■□□□ 1.06
CCDC57-219ENST00000584717 DDX60Q8IY21 1712 aaKnown RBP21.66■■□□□ 1.06
CCDC57-219ENST00000584717 DUOX1Q9NRD9 1551 aa21.65■■□□□ 1.06
CCDC57-219ENST00000584717 RAD17O75943 681 aa21.65■■□□□ 1.06
CCDC57-219ENST00000584717 HDGFL1Q5TGJ6 251 aa21.65■■□□□ 1.06
CCDC57-219ENST00000584717 CIAPIN1Q6FI81 312 aa21.65■■□□□ 1.06
CCDC57-219ENST00000584717 CYP4F22Q6NT55 531 aa21.65■■□□□ 1.06
CCDC57-219ENST00000584717 DDX10Q13206 875 aaKnown RBP21.64■■□□□ 1.05
CCDC57-219ENST00000584717 RUNDC1Q96C34 613 aa21.64■■□□□ 1.05
CCDC57-219ENST00000584717 LRRC37AA6NMS7 1700 aa21.63■■□□□ 1.05
CCDC57-219ENST00000584717 WDR43Q15061 677 aaKnown RBP eCLIP21.63■■□□□ 1.05
CCDC57-219ENST00000584717 BCL2L13Q9BXK5 485 aa21.63■■□□□ 1.05
CCDC57-219ENST00000584717 TLL2Q9Y6L7 1015 aa21.63■■□□□ 1.05
CCDC57-219ENST00000584717 ECE1P42892 770 aa21.62■■□□□ 1.05
CCDC57-219ENST00000584717 PLBD2Q8NHP8 589 aa21.62■■□□□ 1.05
CCDC57-219ENST00000584717 GLIS2Q9BZE0 524 aaPredicted RBP21.62■■□□□ 1.05
CCDC57-219ENST00000584717 ATP5J2-PTCD1G3V325 749 aa21.61■■□□□ 1.05
CCDC57-219ENST00000584717 TNIP1Q15025 636 aa21.61■■□□□ 1.05
CCDC57-219ENST00000584717 TRPM4Q8TD43 1214 aa21.61■■□□□ 1.05
CCDC57-219ENST00000584717 FAM89AQ96GI7 184 aa21.61■■□□□ 1.05
CCDC57-219ENST00000584717 GPR101Q96P66 508 aaPredicted RBP21.61■■□□□ 1.05
CCDC57-219ENST00000584717 CDHR2Q9BYE9 1310 aa21.6■■□□□ 1.05
CCDC57-219ENST00000584717 COL4A1P02462 1669 aa21.6■■□□□ 1.05
CCDC57-219ENST00000584717 SHTN1A0MZ66 631 aa21.6■■□□□ 1.05
CCDC57-219ENST00000584717 YDJCA8MPS7 323 aa21.6■■□□□ 1.05
CCDC57-219ENST00000584717 CELF2O95319 508 aaKnown RBP21.6■■□□□ 1.05
CCDC57-219ENST00000584717 ANKRD13DQ6ZTN6 518 aa21.6■■□□□ 1.05
CCDC57-219ENST00000584717 ISCA1Q9BUE6 129 aa21.6■■□□□ 1.05
CCDC57-219ENST00000584717 AOC2O75106 756 aa21.59■■□□□ 1.05
CCDC57-219ENST00000584717 HIRAP54198 1017 aaPredicted RBP21.59■■□□□ 1.05
CCDC57-219ENST00000584717 RTL5Q5HYW3 569 aaPredicted RBP21.59■■□□□ 1.05
CCDC57-219ENST00000584717 TMC4Q7Z404 712 aa21.59■■□□□ 1.05
CCDC57-219ENST00000584717 CELF1Q92879 486 aaKnown RBP21.59■■□□□ 1.05
CCDC57-219ENST00000584717 DBF4Q9UBU7 674 aaPredicted RBP21.59■■□□□ 1.05
CCDC57-219ENST00000584717 HOXB7P09629 217 aa21.58■■□□□ 1.05
CCDC57-219ENST00000584717 BEGAINQ9BUH8 593 aa21.58■■□□□ 1.05
CCDC57-219ENST00000584717 ZNF408Q9H9D4 720 aa21.58■■□□□ 1.05
CCDC57-219ENST00000584717 CNOT7Q9UIV1 285 aaKnown RBP21.58■■□□□ 1.05
CCDC57-219ENST00000584717 ADAMTS8Q9UP79 889 aa21.58■■□□□ 1.05
CCDC57-219ENST00000584717 DUSP27Q5VZP5 1158 aa21.57■■□□□ 1.04
CCDC57-219ENST00000584717 SAPCD2Q86UD0 394 aa21.57■■□□□ 1.04
CCDC57-219ENST00000584717 PGAP2Q9UHJ9 254 aa21.57■■□□□ 1.04
CCDC57-219ENST00000584717 NSFL1CQ9UNZ2 370 aaKnown RBP21.57■■□□□ 1.04
CCDC57-219ENST00000584717 ZBTB12Q9Y330 459 aaPredicted RBP21.57■■□□□ 1.04
CCDC57-219ENST00000584717 RIMBP2O15034 1052 aa21.56■■□□□ 1.04
CCDC57-219ENST00000584717 SF3B3Q15393 1217 aaKnown RBP21.56■■□□□ 1.04
CCDC57-219ENST00000584717 WASHC4Q2M389 1173 aa21.56■■□□□ 1.04
CCDC57-219ENST00000584717 MICALL2Q8IY33 904 aa21.56■■□□□ 1.04
CCDC57-219ENST00000584717 CFAP44Q96MT7 982 aa21.56■■□□□ 1.04
CCDC57-219ENST00000584717 DBNDD1Q9H9R9 158 aa21.56■■□□□ 1.04
CCDC57-219ENST00000584717 HYPKQ9NX55 129 aa21.56■■□□□ 1.04
CCDC57-219ENST00000584717 TSKSQ9UJT2 592 aa21.56■■□□□ 1.04
CCDC57-219ENST00000584717 C6orf229H3BNL8 230 aa21.55■■□□□ 1.04
CCDC57-219ENST00000584717 H7C1D1 291 aa21.55■■□□□ 1.04
CCDC57-219ENST00000584717 GPSM2P81274 684 aa21.55■■□□□ 1.04
CCDC57-219ENST00000584717 ZC3H15Q8WU90 426 aaKnown RBP21.55■■□□□ 1.04
CCDC57-219ENST00000584717 ABHD8Q96I13 439 aa21.55■■□□□ 1.04
CCDC57-219ENST00000584717 MBIPQ9NS73 344 aa21.55■■□□□ 1.04
CCDC57-219ENST00000584717 PSMD14O00487 310 aa21.54■■□□□ 1.04
CCDC57-219ENST00000584717 IRS4O14654 1257 aaPredicted RBP21.54■■□□□ 1.04
CCDC57-219ENST00000584717 MAP2K2P36507 400 aa21.53■■□□□ 1.04
CCDC57-219ENST00000584717 CDC37L1Q7L3B6 337 aa21.53■■□□□ 1.04
CCDC57-219ENST00000584717 POLLQ9UGP5 575 aa21.53■■□□□ 1.04
CCDC57-219ENST00000584717 DOK7Q18PE1 504 aa21.52■■□□□ 1.04
CCDC57-219ENST00000584717 TBC1D10BQ4KMP7 808 aaPredicted RBP21.52■■□□□ 1.04
CCDC57-219ENST00000584717 DLK2Q6UY11 383 aa21.52■■□□□ 1.04
CCDC57-219ENST00000584717 SAMD7Q7Z3H4 446 aa21.52■■□□□ 1.04
CCDC57-219ENST00000584717 RIC3Q7Z5B4 369 aa21.52■■□□□ 1.04
CCDC57-219ENST00000584717 USP48Q86UV5 1035 aa21.52■■□□□ 1.04
CCDC57-219ENST00000584717 ECE2O60344 883 aa21.51■■□□□ 1.03
CCDC57-219ENST00000584717 ZEB1P37275 1124 aaPredicted RBP21.51■■□□□ 1.03
CCDC57-219ENST00000584717 GOLGA2Q08379 1002 aa21.51■■□□□ 1.03
CCDC57-219ENST00000584717 TRIM28Q13263 835 aaKnown RBP21.51■■□□□ 1.03
CCDC57-219ENST00000584717 DPF2Q92785 391 aa21.51■■□□□ 1.03
CCDC57-219ENST00000584717 PHAXQ9H814 394 aaKnown RBP21.51■■□□□ 1.03
CCDC57-219ENST00000584717 KCNQ5Q9NR82 932 aa21.51■■□□□ 1.03
CCDC57-219ENST00000584717 EGFRP00533 1210 aa21.5■■□□□ 1.03
CCDC57-219ENST00000584717 RPS8P62241 208 aaKnown RBP21.5■■□□□ 1.03
CCDC57-219ENST00000584717 HHIPL1Q96JK4 782 aa21.5■■□□□ 1.03
CCDC57-219ENST00000584717 RTL9Q8NET4 1388 aa21.49■■□□□ 1.03
CCDC57-219ENST00000584717 ELL2O00472 640 aaPredicted RBP21.49■■□□□ 1.03
CCDC57-219ENST00000584717 ZNF853P0CG23 659 aa21.49■■□□□ 1.03
CCDC57-219ENST00000584717 TBC1D16Q8TBP0 767 aa21.49■■□□□ 1.03
CCDC57-219ENST00000584717 EYA3Q99504 573 aa21.49■■□□□ 1.03
CCDC57-219ENST00000584717 MYD88Q99836 296 aa21.49■■□□□ 1.03
CCDC57-219ENST00000584717 SEC31BQ9NQW1 1179 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms