RNA–Protein interactions for RNA: ENST00000584439.1

CTC1-212, Transcript of CST telomere replication complex component 1, humanhuman

TSL 4

Gene CTC1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-212ENST00000584439 POTEFA5A3E0 1075 aa8.56□□□□□ -1.04
CTC1-212ENST00000584439 HSP90AB1P08238 724 aaKnown RBP8.56□□□□□ -1.04
CTC1-212ENST00000584439 LMOD1P29536 600 aaPredicted RBP8.56□□□□□ -1.04
CTC1-212ENST00000584439 RBM25P49756 843 aaKnown RBP8.56□□□□□ -1.04
CTC1-212ENST00000584439 HIRAP54198 1017 aaPredicted RBP8.56□□□□□ -1.04
CTC1-212ENST00000584439 EIF5P55010 431 aaKnown RBP8.56□□□□□ -1.04
CTC1-212ENST00000584439 HUNKP57058 714 aa8.56□□□□□ -1.04
CTC1-212ENST00000584439 TMCO4Q5TGY1 634 aa8.56□□□□□ -1.04
CTC1-212ENST00000584439 CNBD1Q8NA66 436 aa8.56□□□□□ -1.04
CTC1-212ENST00000584439 CARD14Q9BXL6 1004 aa8.56□□□□□ -1.04
CTC1-212ENST00000584439 LGR6Q9HBX8 967 aa8.56□□□□□ -1.04
CTC1-212ENST00000584439 PDZRN3Q9UPQ7 1066 aa8.56□□□□□ -1.04
CTC1-212ENST00000584439 NUP98P52948 1817 aa8.56□□□□□ -1.04
CTC1-212ENST00000584439 SHTN1A0MZ66 631 aa8.55□□□□□ -1.04
CTC1-212ENST00000584439 HAX1O00165 279 aa8.55□□□□□ -1.04
CTC1-212ENST00000584439 PYGBP11216 843 aa8.55□□□□□ -1.04
CTC1-212ENST00000584439 PLEKHO1Q53GL0 409 aaPredicted RBP8.55□□□□□ -1.04
CTC1-212ENST00000584439 CSRNP1Q96S65 589 aa8.55□□□□□ -1.04
CTC1-212ENST00000584439 SAGE1Q9NXZ1 904 aa8.55□□□□□ -1.04
CTC1-212ENST00000584439 POLKQ9UBT6 870 aa8.55□□□□□ -1.04
CTC1-212ENST00000584439 MRC1P22897 1456 aa8.54□□□□□ -1.04
CTC1-212ENST00000584439 MFAP1P55081 439 aaKnown RBP8.54□□□□□ -1.04
CTC1-212ENST00000584439 EIF6P56537 245 aaKnown RBP8.54□□□□□ -1.04
CTC1-212ENST00000584439 GZF1Q9H116 711 aaPredicted RBP8.54□□□□□ -1.04
CTC1-212ENST00000584439 ZNF330Q9Y3S2 320 aaPredicted RBP8.54□□□□□ -1.04
CTC1-212ENST00000584439 CAMTA2O94983 1202 aa8.53□□□□□ -1.04
CTC1-212ENST00000584439 AKAP4Q5JQC9 854 aa8.53□□□□□ -1.04
CTC1-212ENST00000584439 RGMBQ6NW40 437 aa8.53□□□□□ -1.04
CTC1-212ENST00000584439 USP48Q86UV5 1035 aa8.53□□□□□ -1.04
CTC1-212ENST00000584439 RTKN2Q8IZC4 609 aa8.53□□□□□ -1.04
CTC1-212ENST00000584439 TRPM4Q8TD43 1214 aa8.53□□□□□ -1.04
CTC1-212ENST00000584439 JDP2Q8WYK2 163 aa8.53□□□□□ -1.04
CTC1-212ENST00000584439 ADARB2Q9NS39 739 aaKnown RBP8.53□□□□□ -1.04
CTC1-212ENST00000584439 GPRC5DQ9NZD1 345 aa8.53□□□□□ -1.04
CTC1-212ENST00000584439 PGAP2Q9UHJ9 254 aa8.53□□□□□ -1.04
CTC1-212ENST00000584439 LAMB2P55268 1798 aa8.53□□□□□ -1.04
CTC1-212ENST00000584439 NPHP1O15259 732 aa8.52□□□□□ -1.05
CTC1-212ENST00000584439 NPR1P16066 1061 aa8.52□□□□□ -1.05
CTC1-212ENST00000584439 ST5P78524 1137 aa8.52□□□□□ -1.05
CTC1-212ENST00000584439 ZNF296Q8WUU4 475 aaPredicted RBP8.52□□□□□ -1.05
CTC1-212ENST00000584439 SETDB2Q96T68 719 aa8.52□□□□□ -1.05
CTC1-212ENST00000584439 SLC52A2Q9HAB3 445 aa8.52□□□□□ -1.05
CTC1-212ENST00000584439 LAMB4A4D0S4 1761 aa8.52□□□□□ -1.05
CTC1-212ENST00000584439 KDM3BQ7LBC6 1761 aa8.52□□□□□ -1.05
CTC1-212ENST00000584439 LAMA3Q16787 3333 aa8.52□□□□□ -1.05
CTC1-212ENST00000584439 KLRG2A4D1S0 409 aaPredicted RBP8.51□□□□□ -1.05
CTC1-212ENST00000584439 PPP1R37O75864 691 aa8.51□□□□□ -1.05
CTC1-212ENST00000584439 TBC1D8O95759 1140 aa8.51□□□□□ -1.05
CTC1-212ENST00000584439 TNNT2P45379 298 aaPredicted RBP8.51□□□□□ -1.05
CTC1-212ENST00000584439 PIP4K2AP48426 406 aaPredicted RBP8.51□□□□□ -1.05
CTC1-212ENST00000584439 ZNF157P51786 506 aaPredicted RBP8.51□□□□□ -1.05
CTC1-212ENST00000584439 EVX2Q03828 476 aa8.51□□□□□ -1.05
CTC1-212ENST00000584439 C1orf141Q5JVX7 400 aa8.51□□□□□ -1.05
CTC1-212ENST00000584439 PSMD1Q99460 953 aa8.51□□□□□ -1.05
CTC1-212ENST00000584439 MFRPQ9BY79 579 aa8.51□□□□□ -1.05
CTC1-212ENST00000584439 VCANP13611 3396 aa8.51□□□□□ -1.05
CTC1-212ENST00000584439 FAM177BA6PVY3 158 aa8.5□□□□□ -1.05
CTC1-212ENST00000584439 GMPSP49915 693 aaPredicted RBP8.5□□□□□ -1.05
CTC1-212ENST00000584439 CXCL9Q07325 125 aa8.5□□□□□ -1.05
CTC1-212ENST00000584439 RASEFQ8IZ41 740 aa8.5□□□□□ -1.05
CTC1-212ENST00000584439 LARGE2Q8N3Y3 721 aa8.5□□□□□ -1.05
CTC1-212ENST00000584439 OTUD5Q96G74 571 aa8.5□□□□□ -1.05
CTC1-212ENST00000584439 R3HDMLQ9H3Y0 253 aa8.5□□□□□ -1.05
CTC1-212ENST00000584439 NPC1L1Q9UHC9 1359 aa8.49□□□□□ -1.05
CTC1-212ENST00000584439 EYSQ5T1H1 3165 aa8.49□□□□□ -1.05
CTC1-212ENST00000584439 TCERG1O14776 1098 aaKnown RBP8.49□□□□□ -1.05
CTC1-212ENST00000584439 EGFRP00533 1210 aa8.49□□□□□ -1.05
CTC1-212ENST00000584439 A1BGP04217 495 aa8.49□□□□□ -1.05
CTC1-212ENST00000584439 SLC10A3P09131 477 aa8.49□□□□□ -1.05
CTC1-212ENST00000584439 EN2P19622 333 aaPredicted RBP8.49□□□□□ -1.05
CTC1-212ENST00000584439 MLLT3P42568 568 aaPredicted RBP8.49□□□□□ -1.05
CTC1-212ENST00000584439 PKN2Q16513 984 aaKnown RBP8.49□□□□□ -1.05
CTC1-212ENST00000584439 AMOTQ4VCS5 1084 aa8.49□□□□□ -1.05
CTC1-212ENST00000584439 FBXO46Q6PJ61 603 aaPredicted RBP8.49□□□□□ -1.05
CTC1-212ENST00000584439 CDC37L1Q7L3B6 337 aa8.49□□□□□ -1.05
CTC1-212ENST00000584439 DDRGK1Q96HY6 314 aa8.49□□□□□ -1.05
CTC1-212ENST00000584439 HDAC9Q9UKV0 1011 aa8.49□□□□□ -1.05
CTC1-212ENST00000584439 SCN9AQ15858 1988 aa8.49□□□□□ -1.05
CTC1-212ENST00000584439 A0A087WZG4 1122 aa8.48□□□□□ -1.05
CTC1-212ENST00000584439 ADM5C9JUS6 153 aa8.48□□□□□ -1.05
CTC1-212ENST00000584439 RNMTO43148 476 aaKnown RBP8.48□□□□□ -1.05
CTC1-212ENST00000584439 EIF5BO60841 1220 aaKnown RBP8.48□□□□□ -1.05
CTC1-212ENST00000584439 AOC3Q16853 763 aa8.48□□□□□ -1.05
CTC1-212ENST00000584439 NBPF5PQ86XG9 351 aaPredicted RBP8.48□□□□□ -1.05
CTC1-212ENST00000584439 GBA2Q9HCG7 927 aaPredicted RBP8.48□□□□□ -1.05
CTC1-212ENST00000584439 H0YGN5 161 aa8.47□□□□□ -1.05
CTC1-212ENST00000584439 RETREG2Q8NC44 543 aa8.47□□□□□ -1.05
CTC1-212ENST00000584439 CCDC102AQ96A19 550 aa8.47□□□□□ -1.05
CTC1-212ENST00000584439 ZNF496Q96IT1 587 aaPredicted RBP8.47□□□□□ -1.05
CTC1-212ENST00000584439 SPTBN5Q9NRC6 3674 aaKnown RBP8.47□□□□□ -1.05
CTC1-212ENST00000584439 ZSWIM8A7E2V4 1837 aa8.47□□□□□ -1.05
CTC1-212ENST00000584439 ABCC12Q96J65 1359 aa8.47□□□□□ -1.05
CTC1-212ENST00000584439 RAD17O75943 681 aa8.46□□□□□ -1.06
CTC1-212ENST00000584439 CDK11BP21127 795 aaKnown RBP8.46□□□□□ -1.06
CTC1-212ENST00000584439 IL6STP40189 918 aaPredicted RBP8.46□□□□□ -1.06
CTC1-212ENST00000584439 SULT6B1Q6IMI4 303 aa8.46□□□□□ -1.06
CTC1-212ENST00000584439 SAMD7Q7Z3H4 446 aa8.46□□□□□ -1.06
CTC1-212ENST00000584439 DZIP3Q86Y13 1208 aaKnown RBP8.46□□□□□ -1.06
CTC1-212ENST00000584439 RASAL3Q86YV0 1011 aa8.46□□□□□ -1.06
CTC1-212ENST00000584439 NIM1KQ8IY84 436 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms