RNA–Protein interactions for RNA: ENST00000584340.1

PSMD11-210, Transcript of proteasome 26S subunit, non-ATPase 11, human

TSL 4

Gene PSMD11, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD11-210	ENST00000584340	PRPF40B	Q6NWY9	871 aa	Known RBP	13.64	□□□□□ -0.23
PSMD11-210	ENST00000584340	SEC31B	Q9NQW1	1179 aa		13.64	□□□□□ -0.23
PSMD11-210	ENST00000584340	LTBP1	Q14766	1721 aa		13.64	□□□□□ -0.23
PSMD11-210	ENST00000584340	RTL9	Q8NET4	1388 aa		13.63	□□□□□ -0.23
PSMD11-210	ENST00000584340	CTSW	P56202	376 aa		13.63	□□□□□ -0.23
PSMD11-210	ENST00000584340	CELF1	Q92879	486 aa	Known RBP	13.63	□□□□□ -0.23
PSMD11-210	ENST00000584340	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
PSMD11-210	ENST00000584340	SUCLG2	Q96I99	432 aa		13.63	□□□□□ -0.23
PSMD11-210	ENST00000584340	BCS1L	Q9Y276	419 aa		13.63	□□□□□ -0.23
PSMD11-210	ENST00000584340	NFKBIE	O00221	500 aa		13.62	□□□□□ -0.23
PSMD11-210	ENST00000584340	CCT4	P50991	539 aa	Known RBP	13.62	□□□□□ -0.23
PSMD11-210	ENST00000584340	RABL6	Q3YEC7	729 aa	Predicted RBP	13.62	□□□□□ -0.23
PSMD11-210	ENST00000584340	ZKSCAN2	Q63HK3	967 aa		13.62	□□□□□ -0.23
PSMD11-210	ENST00000584340	TMEM57	Q8N5G2	664 aa		13.62	□□□□□ -0.23
PSMD11-210	ENST00000584340	ANKRD44	Q8N8A2	993 aa		13.62	□□□□□ -0.23
PSMD11-210	ENST00000584340	FRAT1	Q92837	279 aa	Predicted RBP	13.62	□□□□□ -0.23
PSMD11-210	ENST00000584340	CNKSR1	Q969H4	720 aa		13.62	□□□□□ -0.23
PSMD11-210	ENST00000584340	CHD4	Q14839	1912 aa		13.61	□□□□□ -0.23
PSMD11-210	ENST00000584340	IPO8	O15397	1037 aa	Known RBP	13.61	□□□□□ -0.23
PSMD11-210	ENST00000584340	PLIN1	O60240	522 aa		13.61	□□□□□ -0.23
PSMD11-210	ENST00000584340	ALDH1B1	P30837	517 aa		13.61	□□□□□ -0.23
PSMD11-210	ENST00000584340	C20orf194	Q5TEA3	1177 aa		13.61	□□□□□ -0.23
PSMD11-210	ENST00000584340	CLUAP1	Q96AJ1	413 aa		13.61	□□□□□ -0.23
PSMD11-210	ENST00000584340	MEIS3	Q99687	375 aa		13.61	□□□□□ -0.23
PSMD11-210	ENST00000584340	GREM2	Q9H772	168 aa		13.61	□□□□□ -0.23
PSMD11-210	ENST00000584340	DUOX1	Q9NRD9	1551 aa		13.61	□□□□□ -0.23
PSMD11-210	ENST00000584340	CCDC88A	Q3V6T2	1871 aa		13.61	□□□□□ -0.23
PSMD11-210	ENST00000584340	ZBTB7B	O15156	539 aa	Predicted RBP	13.6	□□□□□ -0.23
PSMD11-210	ENST00000584340	NPHP1	O15259	732 aa		13.6	□□□□□ -0.23
PSMD11-210	ENST00000584340	C21orf2	O43822	256 aa		13.6	□□□□□ -0.23
PSMD11-210	ENST00000584340	GRAP	Q13588	217 aa		13.6	□□□□□ -0.23
PSMD11-210	ENST00000584340	GPR162	Q16538	588 aa		13.6	□□□□□ -0.23
PSMD11-210	ENST00000584340	GRAPL	Q8TC17	118 aa	Predicted RBP	13.6	□□□□□ -0.23
PSMD11-210	ENST00000584340	RBM17	Q96I25	401 aa	Known RBP	13.6	□□□□□ -0.23
PSMD11-210	ENST00000584340	BBOX1	O75936	387 aa		13.59	□□□□□ -0.23
PSMD11-210	ENST00000584340	PANK1	Q8TE04	598 aa		13.59	□□□□□ -0.23
PSMD11-210	ENST00000584340	ATP6V0A2	Q9Y487	856 aa		13.59	□□□□□ -0.23
PSMD11-210	ENST00000584340	COL4A5	P29400	1685 aa		13.59	□□□□□ -0.23
PSMD11-210	ENST00000584340	GRIN3B	O60391	1043 aa		13.58	□□□□□ -0.24
PSMD11-210	ENST00000584340	RFX5	P48382	616 aa	Predicted RBP	13.58	□□□□□ -0.24
PSMD11-210	ENST00000584340	RPS8	P62241	208 aa	Known RBP	13.58	□□□□□ -0.24
PSMD11-210	ENST00000584340	FAM161A	Q3B820	660 aa		13.58	□□□□□ -0.24
PSMD11-210	ENST00000584340	LMBR1L	Q6UX01	489 aa		13.58	□□□□□ -0.24
PSMD11-210	ENST00000584340	SP8	Q8IXZ3	490 aa		13.58	□□□□□ -0.24
PSMD11-210	ENST00000584340	DZIP1L	Q8IYY4	767 aa	Known RBP	13.58	□□□□□ -0.24
PSMD11-210	ENST00000584340	RPGR	Q92834	1020 aa	Known RBP	13.58	□□□□□ -0.24
PSMD11-210	ENST00000584340	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.58	□□□□□ -0.24
PSMD11-210	ENST00000584340	BICC1	Q9H694	974 aa	Known RBP	13.58	□□□□□ -0.24
PSMD11-210	ENST00000584340	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.58	□□□□□ -0.24
PSMD11-210	ENST00000584340	DICER1	Q9UPY3	1922 aa	Known RBP	13.58	□□□□□ -0.24
PSMD11-210	ENST00000584340		A0A1B0GUL6	1792 aa		13.58	□□□□□ -0.24
PSMD11-210	ENST00000584340	SPEF2	Q9C093	1822 aa		13.57	□□□□□ -0.24
PSMD11-210	ENST00000584340	WTIP	A6NIX2	430 aa	Predicted RBP	13.57	□□□□□ -0.24
PSMD11-210	ENST00000584340	CCDC152	Q4G0S7	254 aa		13.57	□□□□□ -0.24
PSMD11-210	ENST00000584340	DDX46	Q7L014	1031 aa	Known RBP	13.57	□□□□□ -0.24
PSMD11-210	ENST00000584340	LTBP3	Q9NS15	1303 aa		13.57	□□□□□ -0.24
PSMD11-210	ENST00000584340	PPEF1	O14829	653 aa	Predicted RBP	13.56	□□□□□ -0.24
PSMD11-210	ENST00000584340	HSP90B1	P14625	803 aa	Known RBP	13.56	□□□□□ -0.24
PSMD11-210	ENST00000584340	ITGA6	P23229	1130 aa		13.56	□□□□□ -0.24
PSMD11-210	ENST00000584340	RASSF7	Q02833	373 aa		13.56	□□□□□ -0.24
PSMD11-210	ENST00000584340	PELP1	Q8IZL8	1130 aa	Known RBP	13.56	□□□□□ -0.24
PSMD11-210	ENST00000584340	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.56	□□□□□ -0.24
PSMD11-210	ENST00000584340	MTX1	Q13505	466 aa		13.55	□□□□□ -0.24
PSMD11-210	ENST00000584340	PDE3A	Q14432	1141 aa		13.55	□□□□□ -0.24
PSMD11-210	ENST00000584340	ARHGAP27	Q6ZUM4	889 aa		13.55	□□□□□ -0.24
PSMD11-210	ENST00000584340	BSDC1	Q9NW68	430 aa	Predicted RBP	13.55	□□□□□ -0.24
PSMD11-210	ENST00000584340	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.55	□□□□□ -0.24
PSMD11-210	ENST00000584340	ZNF594	Q96JF6	807 aa	Predicted RBP	13.54	□□□□□ -0.24
PSMD11-210	ENST00000584340	PSMD1	Q99460	953 aa		13.54	□□□□□ -0.24
PSMD11-210	ENST00000584340	PODXL2	Q9NZ53	605 aa		13.54	□□□□□ -0.24
PSMD11-210	ENST00000584340	MINPP1	Q9UNW1	487 aa		13.54	□□□□□ -0.24
PSMD11-210	ENST00000584340	LRRFIP2	Q9Y608	721 aa	Known RBP	13.54	□□□□□ -0.24
PSMD11-210	ENST00000584340	IRS2	Q9Y4H2	1338 aa		13.54	□□□□□ -0.24
PSMD11-210	ENST00000584340	GPSM2	P81274	684 aa		13.53	□□□□□ -0.24
PSMD11-210	ENST00000584340	PTPN12	Q05209	780 aa	Known RBP	13.53	□□□□□ -0.24
PSMD11-210	ENST00000584340	CCDC93	Q567U6	631 aa		13.53	□□□□□ -0.24
PSMD11-210	ENST00000584340	CC2D2B	Q6DHV5	1058 aa		13.53	□□□□□ -0.24
PSMD11-210	ENST00000584340	TMC4	Q7Z404	712 aa		13.53	□□□□□ -0.24
PSMD11-210	ENST00000584340	ZBTB40	Q9NUA8	1239 aa		13.53	□□□□□ -0.24
PSMD11-210	ENST00000584340	POLL	Q9UGP5	575 aa		13.53	□□□□□ -0.24
PSMD11-210	ENST00000584340	RIPOR2	Q9Y4F9	1068 aa		13.53	□□□□□ -0.24
PSMD11-210	ENST00000584340	UBTFL1	P0CB47	393 aa	Predicted RBP	13.52	□□□□□ -0.25
PSMD11-210	ENST00000584340	RRP1	P56182	461 aa	Known RBP	13.52	□□□□□ -0.25
PSMD11-210	ENST00000584340	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.52	□□□□□ -0.25
PSMD11-210	ENST00000584340	MVP	Q14764	893 aa	Known RBP	13.52	□□□□□ -0.25
PSMD11-210	ENST00000584340	RTKN2	Q8IZC4	609 aa		13.52	□□□□□ -0.25
PSMD11-210	ENST00000584340	PUS3	Q9BZE2	481 aa	Known RBP	13.52	□□□□□ -0.25
PSMD11-210	ENST00000584340	COG6	Q9Y2V7	657 aa		13.52	□□□□□ -0.25
PSMD11-210	ENST00000584340	PNMA6E	A0A0J9YXQ4	647 aa		13.51	□□□□□ -0.25
PSMD11-210	ENST00000584340	GNAI3	P08754	354 aa		13.51	□□□□□ -0.25
PSMD11-210	ENST00000584340	SOGA3	Q5TF21	947 aa		13.51	□□□□□ -0.25
PSMD11-210	ENST00000584340	ANKRD18A	Q8IVF6	992 aa		13.51	□□□□□ -0.25
PSMD11-210	ENST00000584340	KLHDC4	Q8TBB5	520 aa		13.51	□□□□□ -0.25
PSMD11-210	ENST00000584340	ZNF646	O15015	1829 aa	Predicted RBP	13.5	□□□□□ -0.25
PSMD11-210	ENST00000584340	ANKRD18B	A2A2Z9	1011 aa		13.5	□□□□□ -0.25
PSMD11-210	ENST00000584340	LMNB1	P20700	586 aa		13.5	□□□□□ -0.25
PSMD11-210	ENST00000584340	IFIT5	Q13325	482 aa	Known RBP	13.5	□□□□□ -0.25
PSMD11-210	ENST00000584340	POLA2	Q14181	598 aa		13.5	□□□□□ -0.25
PSMD11-210	ENST00000584340	GRIPAP1	Q4V328	841 aa		13.5	□□□□□ -0.25
PSMD11-210	ENST00000584340	LRRC24	Q50LG9	513 aa		13.5	□□□□□ -0.25

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