RNA–Protein interactions for RNA: ENST00000584335.5

SNX11-213, Transcript of sorting nexin 11, humanhuman

TSL 5

Gene SNX11, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-213ENST00000584335 RC3H1Q5TC82 1133 aaKnown RBP11.61□□□□□ -0.55
SNX11-213ENST00000584335 UBE3BQ7Z3V4 1068 aa11.61□□□□□ -0.55
SNX11-213ENST00000584335 RHPN1Q8TCX5 695 aa11.61□□□□□ -0.55
SNX11-213ENST00000584335 STAP2Q9UGK3 403 aa11.61□□□□□ -0.55
SNX11-213ENST00000584335 MYH14Q7Z406 1995 aaKnown RBP11.61□□□□□ -0.55
SNX11-213ENST00000584335 KAT6BQ8WYB5 2073 aa11.61□□□□□ -0.55
SNX11-213ENST00000584335 CNTNAP4Q9C0A0 1308 aa11.6□□□□□ -0.55
SNX11-213ENST00000584335 TUBGCP6Q96RT7 1819 aa11.6□□□□□ -0.55
SNX11-213ENST00000584335 POTEB2H3BUK9 544 aa11.6□□□□□ -0.55
SNX11-213ENST00000584335 PCCAP05165 728 aaPredicted RBP11.6□□□□□ -0.55
SNX11-213ENST00000584335 FOXO4P98177 505 aa11.6□□□□□ -0.55
SNX11-213ENST00000584335 EPHA10Q5JZY3 1008 aa11.6□□□□□ -0.55
SNX11-213ENST00000584335 ZNF772Q68DY9 489 aaPredicted RBP11.6□□□□□ -0.55
SNX11-213ENST00000584335 NPM2Q86SE8 214 aaKnown RBP11.6□□□□□ -0.55
SNX11-213ENST00000584335 DZIP3Q86Y13 1208 aaKnown RBP11.6□□□□□ -0.55
SNX11-213ENST00000584335 C16orf71Q8IYS4 520 aaPredicted RBP11.6□□□□□ -0.55
SNX11-213ENST00000584335 HS6ST3Q8IZP7 471 aa11.6□□□□□ -0.55
SNX11-213ENST00000584335 COPRSQ9NQ92 184 aa11.6□□□□□ -0.55
SNX11-213ENST00000584335 BRWD3Q6RI45 1802 aa11.6□□□□□ -0.55
SNX11-213ENST00000584335 CDHR2Q9BYE9 1310 aa11.6□□□□□ -0.55
SNX11-213ENST00000584335 TAF1LQ8IZX4 1826 aa11.59□□□□□ -0.55
SNX11-213ENST00000584335 EIF5BO60841 1220 aaKnown RBP11.59□□□□□ -0.55
SNX11-213ENST00000584335 PDE1AP54750 535 aa11.59□□□□□ -0.55
SNX11-213ENST00000584335 ZNF34Q8IZ26 560 aa11.59□□□□□ -0.55
SNX11-213ENST00000584335 ZBTB38Q8NAP3 1195 aaPredicted RBP11.59□□□□□ -0.55
SNX11-213ENST00000584335 PLA2G12BQ9BX93 195 aa11.59□□□□□ -0.55
SNX11-213ENST00000584335 ZNF330Q9Y3S2 320 aaPredicted RBP11.59□□□□□ -0.55
SNX11-213ENST00000584335 USP42Q9H9J4 1324 aaKnown RBP11.59□□□□□ -0.55
SNX11-213ENST00000584335 SCN7AQ01118 1682 aa11.59□□□□□ -0.55
SNX11-213ENST00000584335 APBB1O00213 710 aa11.58□□□□□ -0.56
SNX11-213ENST00000584335 GSPT1P15170 499 aaKnown RBP11.58□□□□□ -0.56
SNX11-213ENST00000584335 MX1P20591 662 aa11.58□□□□□ -0.56
SNX11-213ENST00000584335 ANP32AP39687 249 aaKnown RBP11.58□□□□□ -0.56
SNX11-213ENST00000584335 RFX5P48382 616 aaPredicted RBP11.58□□□□□ -0.56
SNX11-213ENST00000584335 HLFQ16534 295 aa11.58□□□□□ -0.56
SNX11-213ENST00000584335 NLRP10Q86W26 655 aa11.58□□□□□ -0.56
SNX11-213ENST00000584335 LINC00116Q8NCU8 138 aa11.58□□□□□ -0.56
SNX11-213ENST00000584335 OTUD7AQ8TE49 926 aaPredicted RBP11.58□□□□□ -0.56
SNX11-213ENST00000584335 CAMTA2O94983 1202 aa11.57□□□□□ -0.56
SNX11-213ENST00000584335 RBM6P78332 1123 aaKnown RBP11.57□□□□□ -0.56
SNX11-213ENST00000584335 PTPN12Q05209 780 aaKnown RBP11.57□□□□□ -0.56
SNX11-213ENST00000584335 G3BP1Q13283 466 aaKnown RBP eCLIP11.57□□□□□ -0.56
SNX11-213ENST00000584335 FAM196AQ6ZSG2 479 aa11.57□□□□□ -0.56
SNX11-213ENST00000584335 PTF1AQ7RTS3 328 aa11.57□□□□□ -0.56
SNX11-213ENST00000584335 AK7Q96M32 723 aa11.57□□□□□ -0.56
SNX11-213ENST00000584335 CDC45O75419 566 aa11.56□□□□□ -0.56
SNX11-213ENST00000584335 OS9Q13438 667 aaPredicted RBP11.56□□□□□ -0.56
SNX11-213ENST00000584335 LMBR1LQ6UX01 489 aa11.56□□□□□ -0.56
SNX11-213ENST00000584335 CLEC4GQ6UXB4 293 aa11.56□□□□□ -0.56
SNX11-213ENST00000584335 KRT27Q7Z3Y8 459 aa11.56□□□□□ -0.56
SNX11-213ENST00000584335 CLASRPQ8N2M8 674 aaKnown RBP11.56□□□□□ -0.56
SNX11-213ENST00000584335 PDCD7Q8N8D1 485 aaKnown RBP11.56□□□□□ -0.56
SNX11-213ENST00000584335 UPF2Q9HAU5 1272 aaKnown RBP11.56□□□□□ -0.56
SNX11-213ENST00000584335 TBC1D2BQ9UPU7 963 aa11.56□□□□□ -0.56
SNX11-213ENST00000584335 PA2G4Q9UQ80 394 aaKnown RBP11.56□□□□□ -0.56
SNX11-213ENST00000584335 LAMB2P55268 1798 aa11.56□□□□□ -0.56
SNX11-213ENST00000584335 TTC41PQ6P2S7 1318 aa11.56□□□□□ -0.56
SNX11-213ENST00000584335 C4BP0C0L5 1744 aa11.55□□□□□ -0.56
SNX11-213ENST00000584335 MYH3P11055 1940 aa11.55□□□□□ -0.56
SNX11-213ENST00000584335 RPS6KA4O75676 772 aa11.55□□□□□ -0.56
SNX11-213ENST00000584335 SASH1O94885 1247 aa11.55□□□□□ -0.56
SNX11-213ENST00000584335 CSF1RP07333 972 aa11.55□□□□□ -0.56
SNX11-213ENST00000584335 HMGB2P26583 209 aaKnown RBP11.55□□□□□ -0.56
SNX11-213ENST00000584335 PARP10Q53GL7 1025 aa11.55□□□□□ -0.56
SNX11-213ENST00000584335 FAM182BQ5T319 152 aa11.55□□□□□ -0.56
SNX11-213ENST00000584335 JARID2Q92833 1246 aaPredicted RBP11.55□□□□□ -0.56
SNX11-213ENST00000584335 IL1RAPL2Q9NP60 686 aa11.55□□□□□ -0.56
SNX11-213ENST00000584335 CCNL1Q9UK58 526 aaPredicted RBP11.55□□□□□ -0.56
SNX11-213ENST00000584335 ZNF652Q9Y2D9 606 aa11.55□□□□□ -0.56
SNX11-213ENST00000584335 UBN2Q6ZU65 1347 aa11.55□□□□□ -0.56
SNX11-213ENST00000584335 SDSP20132 328 aa11.54□□□□□ -0.56
SNX11-213ENST00000584335 TBC1D9Q6ZT07 1266 aa11.54□□□□□ -0.56
SNX11-213ENST00000584335 ARXQ96QS3 562 aa11.54□□□□□ -0.56
SNX11-213ENST00000584335 CIAO1O76071 339 aa11.53□□□□□ -0.56
SNX11-213ENST00000584335 POTEJP0CG39 1038 aa11.53□□□□□ -0.56
SNX11-213ENST00000584335 HSP90B1P14625 803 aaKnown RBP11.53□□□□□ -0.56
SNX11-213ENST00000584335 DPY19L2Q6NUT2 758 aa11.53□□□□□ -0.56
SNX11-213ENST00000584335 PI4K2BQ8TCG2 481 aa11.53□□□□□ -0.56
SNX11-213ENST00000584335 FAM89AQ96GI7 184 aa11.53□□□□□ -0.56
SNX11-213ENST00000584335 TBC1D32Q96NH3 1257 aa11.53□□□□□ -0.56
SNX11-213ENST00000584335 GPR108Q9NPR9 543 aa11.53□□□□□ -0.56
SNX11-213ENST00000584335 TRMT112Q9UI30 125 aaKnown RBP11.53□□□□□ -0.56
SNX11-213ENST00000584335 COL24A1Q17RW2 1714 aa11.52□□□□□ -0.56
SNX11-213ENST00000584335 PDE8AO60658 829 aa11.52□□□□□ -0.57
SNX11-213ENST00000584335 GPTP24298 496 aa11.52□□□□□ -0.57
SNX11-213ENST00000584335 SLC27A3Q5K4L6 730 aa11.52□□□□□ -0.57
SNX11-213ENST00000584335 CASC1Q6TDU7 716 aa11.52□□□□□ -0.57
SNX11-213ENST00000584335 DDRGK1Q96HY6 314 aa11.52□□□□□ -0.57
SNX11-213ENST00000584335 GPATCH3Q96I76 525 aa11.52□□□□□ -0.57
SNX11-213ENST00000584335 IPO9Q96P70 1041 aaKnown RBP11.52□□□□□ -0.57
SNX11-213ENST00000584335 LRP5O75197 1615 aa11.52□□□□□ -0.57
SNX11-213ENST00000584335 C4AP0C0L4 1744 aa11.52□□□□□ -0.57
SNX11-213ENST00000584335 DDX60Q8IY21 1712 aaKnown RBP11.52□□□□□ -0.57
SNX11-213ENST00000584335 IRS4O14654 1257 aaPredicted RBP11.51□□□□□ -0.57
SNX11-213ENST00000584335 ERC2O15083 957 aa11.51□□□□□ -0.57
SNX11-213ENST00000584335 GLRX3O76003 335 aaKnown RBP11.51□□□□□ -0.57
SNX11-213ENST00000584335 IFIT2P09913 472 aaKnown RBP11.51□□□□□ -0.57
SNX11-213ENST00000584335 IL15P40933 162 aaPredicted RBP11.51□□□□□ -0.57
SNX11-213ENST00000584335 CTSWP56202 376 aa11.51□□□□□ -0.57
SNX11-213ENST00000584335 CCDC57Q2TAC2 916 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms