RNA–Protein interactions for RNA: ENST00000584168.5

CDK5RAP3-232, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 2,684 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-232ENST00000584168 BTG4Q9NY30 223 aa14.04□□□□□ -0.16
CDK5RAP3-232ENST00000584168 NOB1Q9ULX3 412 aaKnown RBP14.04□□□□□ -0.16
CDK5RAP3-232ENST00000584168 KDRP35968 1356 aa14.04□□□□□ -0.16
CDK5RAP3-232ENST00000584168 GNAT3A8MTJ3 354 aa14.04□□□□□ -0.16
CDK5RAP3-232ENST00000584168 KCNQ3O43525 872 aa14.04□□□□□ -0.16
CDK5RAP3-232ENST00000584168 CEP89Q96ST8 783 aa14.04□□□□□ -0.16
CDK5RAP3-232ENST00000584168 DLG5Q8TDM6 1919 aa14.04□□□□□ -0.16
CDK5RAP3-232ENST00000584168 IL16Q14005 1332 aa14.03□□□□□ -0.16
CDK5RAP3-232ENST00000584168 GPT2Q8TD30 523 aa14.03□□□□□ -0.16
CDK5RAP3-232ENST00000584168 TMEM63CQ9P1W3 806 aa14.03□□□□□ -0.16
CDK5RAP3-232ENST00000584168 RGPD1P0DJD0 1748 aa14.02□□□□□ -0.16
CDK5RAP3-232ENST00000584168 TMEM57Q8N5G2 664 aa14.02□□□□□ -0.16
CDK5RAP3-232ENST00000584168 TSPY26PQ9H489 355 aa14.02□□□□□ -0.16
CDK5RAP3-232ENST00000584168 TSPYL4Q9UJ04 414 aa14.02□□□□□ -0.16
CDK5RAP3-232ENST00000584168 COL18A1P39060 1754 aa14.02□□□□□ -0.17
CDK5RAP3-232ENST00000584168 INHBEP58166 350 aa14.02□□□□□ -0.17
CDK5RAP3-232ENST00000584168 GAS2L2Q8NHY3 880 aa14.02□□□□□ -0.17
CDK5RAP3-232ENST00000584168 GNAI1P63096 354 aa14.01□□□□□ -0.17
CDK5RAP3-232ENST00000584168 RAPGEF4Q8WZA2 1011 aa14.01□□□□□ -0.17
CDK5RAP3-232ENST00000584168 PYCARDQ9ULZ3 195 aa14.01□□□□□ -0.17
CDK5RAP3-232ENST00000584168 RPS6KL1Q9Y6S9 549 aa14.01□□□□□ -0.17
CDK5RAP3-232ENST00000584168 CTAGE5O15320 804 aa14.01□□□□□ -0.17
CDK5RAP3-232ENST00000584168 RBM5P52756 815 aaKnown RBP eCLIP14.01□□□□□ -0.179e-32■■■■□ 20.3
CDK5RAP3-232ENST00000584168 MTA1Q13330 715 aa14.01□□□□□ -0.17
CDK5RAP3-232ENST00000584168 FBXO38Q6PIJ6 1188 aa14.01□□□□□ -0.17
CDK5RAP3-232ENST00000584168 CCDC112Q8NEF3 446 aa14.01□□□□□ -0.17
CDK5RAP3-232ENST00000584168 GTF3C6Q969F1 213 aa14.01□□□□□ -0.17
CDK5RAP3-232ENST00000584168 PAXBP1Q9Y5B6 917 aa14.01□□□□□ -0.17
CDK5RAP3-232ENST00000584168 GPS2Q13227 327 aa14□□□□□ -0.17
CDK5RAP3-232ENST00000584168 RABEP1Q15276 862 aa14□□□□□ -0.17
CDK5RAP3-232ENST00000584168 TWISTNBQ3B726 338 aaPredicted RBP14□□□□□ -0.17
CDK5RAP3-232ENST00000584168 DDX54Q8TDD1 881 aaKnown RBP14□□□□□ -0.17
CDK5RAP3-232ENST00000584168 IFT57Q9NWB7 429 aa14□□□□□ -0.17
CDK5RAP3-232ENST00000584168 VAMP4O75379 141 aa14□□□□□ -0.17
CDK5RAP3-232ENST00000584168 IPO7O95373 1038 aaKnown RBP14□□□□□ -0.17
CDK5RAP3-232ENST00000584168 CCDC96Q2M329 555 aa14□□□□□ -0.17
CDK5RAP3-232ENST00000584168 FBXO18Q8NFZ0 1043 aa14□□□□□ -0.17
CDK5RAP3-232ENST00000584168 PAIP2Q9BPZ3 127 aaKnown RBP14□□□□□ -0.17
CDK5RAP3-232ENST00000584168 ZBTB40Q9NUA8 1239 aa14□□□□□ -0.17
CDK5RAP3-232ENST00000584168 CAMTA1Q9Y6Y1 1673 aa14□□□□□ -0.17
CDK5RAP3-232ENST00000584168 JCADQ9P266 1359 aa14□□□□□ -0.17
CDK5RAP3-232ENST00000584168 PRPF40AO75400 957 aaKnown RBP13.99□□□□□ -0.17
CDK5RAP3-232ENST00000584168 MMS22LQ6ZRQ5 1243 aa13.99□□□□□ -0.17
CDK5RAP3-232ENST00000584168 NUCB2P80303 420 aa13.99□□□□□ -0.17
CDK5RAP3-232ENST00000584168 UVSSAQ2YD98 709 aa13.99□□□□□ -0.17
CDK5RAP3-232ENST00000584168 SLFNL1Q499Z3 407 aa13.99□□□□□ -0.17
CDK5RAP3-232ENST00000584168 PLEKHO1Q53GL0 409 aaPredicted RBP13.99□□□□□ -0.17
CDK5RAP3-232ENST00000584168 GOLGA5Q8TBA6 731 aa13.99□□□□□ -0.17
CDK5RAP3-232ENST00000584168 ZNF428Q96B54 188 aa13.99□□□□□ -0.17
CDK5RAP3-232ENST00000584168 LMO7Q8WWI1 1683 aa13.99□□□□□ -0.17
CDK5RAP3-232ENST00000584168 ADCY5O95622 1261 aa13.98□□□□□ -0.17
CDK5RAP3-232ENST00000584168 SLC39A6Q13433 755 aa13.98□□□□□ -0.17
CDK5RAP3-232ENST00000584168 ANKRD23Q86SG2 305 aa13.98□□□□□ -0.17
CDK5RAP3-232ENST00000584168 LNPKQ9C0E8 428 aa13.98□□□□□ -0.17
CDK5RAP3-232ENST00000584168 NUCKS1Q9H1E3 243 aaKnown RBP13.98□□□□□ -0.17
CDK5RAP3-232ENST00000584168 CWC22Q9HCG8 908 aaKnown RBP13.98□□□□□ -0.17
CDK5RAP3-232ENST00000584168 USP25Q9UHP3 1055 aa13.98□□□□□ -0.17
CDK5RAP3-232ENST00000584168 K7ELQ4 463 aaPredicted RBP13.98□□□□□ -0.17
CDK5RAP3-232ENST00000584168 CHL1O00533 1208 aa13.98□□□□□ -0.17
CDK5RAP3-232ENST00000584168 TPM4P67936 248 aa13.98□□□□□ -0.17
CDK5RAP3-232ENST00000584168 C1orf141Q5JVX7 400 aa13.98□□□□□ -0.17
CDK5RAP3-232ENST00000584168 TTC19Q6DKK2 380 aaPredicted RBP13.98□□□□□ -0.17
CDK5RAP3-232ENST00000584168 PPM1EQ8WY54 764 aa13.98□□□□□ -0.17
CDK5RAP3-232ENST00000584168 FAM208AQ9UK61 1670 aaKnown RBP13.98□□□□□ -0.17
CDK5RAP3-232ENST00000584168 MAP3K5Q99683 1374 aa13.98□□□□□ -0.17
CDK5RAP3-232ENST00000584168 ANKRD33BA6NCL7 494 aa13.98□□□□□ -0.17
CDK5RAP3-232ENST00000584168 COL14A1Q05707 1796 aaKnown RBP13.97□□□□□ -0.17
CDK5RAP3-232ENST00000584168 CRB1P82279 1406 aa13.97□□□□□ -0.17
CDK5RAP3-232ENST00000584168 PTPRCP08575 1304 aa13.97□□□□□ -0.17
CDK5RAP3-232ENST00000584168 PRAMEF22A3QJZ6 481 aa13.97□□□□□ -0.17
CDK5RAP3-232ENST00000584168 TPM3P06753 285 aa13.97□□□□□ -0.17
CDK5RAP3-232ENST00000584168 TATP17735 454 aaPredicted RBP13.97□□□□□ -0.17
CDK5RAP3-232ENST00000584168 PIK3R5Q8WYR1 880 aa13.97□□□□□ -0.17
CDK5RAP3-232ENST00000584168 SMARCE1Q969G3 411 aa13.97□□□□□ -0.17
CDK5RAP3-232ENST00000584168 MEGF6O75095 1541 aa13.97□□□□□ -0.17
CDK5RAP3-232ENST00000584168 SCP2P22307 547 aa13.97□□□□□ -0.17
CDK5RAP3-232ENST00000584168 NUCB1Q02818 461 aa13.97□□□□□ -0.17
CDK5RAP3-232ENST00000584168 A0A0G2JS52 829 aa13.96□□□□□ -0.17
CDK5RAP3-232ENST00000584168 CYP27B1O15528 508 aa13.96□□□□□ -0.17
CDK5RAP3-232ENST00000584168 EIF2S2P20042 333 aaKnown RBP13.96□□□□□ -0.17
CDK5RAP3-232ENST00000584168 HSPA1LP34931 641 aa13.96□□□□□ -0.17
CDK5RAP3-232ENST00000584168 CCT2P78371 535 aaKnown RBP13.96□□□□□ -0.17
CDK5RAP3-232ENST00000584168 KCNF1Q9H3M0 494 aa13.96□□□□□ -0.17
CDK5RAP3-232ENST00000584168 ANXA1P04083 346 aa13.96□□□□□ -0.18
CDK5RAP3-232ENST00000584168 ST5P78524 1137 aa13.96□□□□□ -0.18
CDK5RAP3-232ENST00000584168 TEFQ10587 303 aa13.95□□□□□ -0.18
CDK5RAP3-232ENST00000584168 DNAJC14Q6Y2X3 702 aaPredicted RBP13.95□□□□□ -0.18
CDK5RAP3-232ENST00000584168 CHD1LQ86WJ1 897 aa13.95□□□□□ -0.18
CDK5RAP3-232ENST00000584168 POLR3GO15318 223 aaPredicted RBP13.95□□□□□ -0.18
CDK5RAP3-232ENST00000584168 COQ9O75208 318 aa13.95□□□□□ -0.18
CDK5RAP3-232ENST00000584168 JAKMIP3Q5VZ66 844 aa13.95□□□□□ -0.18
CDK5RAP3-232ENST00000584168 KIF2CQ99661 725 aa13.95□□□□□ -0.18
CDK5RAP3-232ENST00000584168 SPATA31A6Q5VVP1 1343 aa13.94□□□□□ -0.18
CDK5RAP3-232ENST00000584168 WDR17Q8IZU2 1322 aa13.94□□□□□ -0.18
CDK5RAP3-232ENST00000584168 RNMTO43148 476 aaKnown RBP13.94□□□□□ -0.18
CDK5RAP3-232ENST00000584168 HTATSF1O43719 755 aaKnown RBP13.94□□□□□ -0.18
CDK5RAP3-232ENST00000584168 IRX1P78414 480 aaPredicted RBP13.94□□□□□ -0.18
CDK5RAP3-232ENST00000584168 TAF7Q15545 349 aaPredicted RBP13.94□□□□□ -0.18
CDK5RAP3-232ENST00000584168 NAIF1Q69YI7 327 aaPredicted RBP13.94□□□□□ -0.18
CDK5RAP3-232ENST00000584168 G2E3Q7L622 706 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms