RNA–Protein interactions for RNA: ENST00000583683.1

NDEL1-217, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 1,802 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-217ENST00000583683 PTPN12Q05209 780 aaKnown RBP22.52■■□□□ 1.2
NDEL1-217ENST00000583683 FAM161AQ3B820 660 aa22.52■■□□□ 1.2
NDEL1-217ENST00000583683 ANKRD45Q5TZF3 282 aa22.52■■□□□ 1.2
NDEL1-217ENST00000583683 ILDR2Q71H61 639 aa22.52■■□□□ 1.2
NDEL1-217ENST00000583683 CCDC85AQ96PX6 553 aaPredicted RBP22.52■■□□□ 1.2
NDEL1-217ENST00000583683 PDGFDQ9GZP0 370 aaPredicted RBP22.52■■□□□ 1.2
NDEL1-217ENST00000583683 COPRSQ9NQ92 184 aa22.52■■□□□ 1.2
NDEL1-217ENST00000583683 SERPINB2P05120 415 aa22.51■■□□□ 1.19
NDEL1-217ENST00000583683 CNBD1Q8NA66 436 aa22.51■■□□□ 1.19
NDEL1-217ENST00000583683 GREM2Q9H772 168 aa22.51■■□□□ 1.19
NDEL1-217ENST00000583683 NRXN2Q9P2S2 1712 aa22.5■■□□□ 1.19
NDEL1-217ENST00000583683 CHD1LQ86WJ1 897 aa22.5■■□□□ 1.19
NDEL1-217ENST00000583683 APBB1O00213 710 aa22.5■■□□□ 1.19
NDEL1-217ENST00000583683 CCDC57Q2TAC2 916 aa22.5■■□□□ 1.19
NDEL1-217ENST00000583683 MSL1Q68DK7 614 aa22.5■■□□□ 1.19
NDEL1-217ENST00000583683 PRR5LQ6MZQ0 368 aa22.5■■□□□ 1.19
NDEL1-217ENST00000583683 CCDC24Q8N4L8 307 aa22.5■■□□□ 1.19
NDEL1-217ENST00000583683 TNRC6CQ9HCJ0 1690 aaKnown RBP22.49■■□□□ 1.19
NDEL1-217ENST00000583683 HSP90AB4PQ58FF6 505 aa22.49■■□□□ 1.19
NDEL1-217ENST00000583683 LNPKQ9C0E8 428 aa22.49■■□□□ 1.19
NDEL1-217ENST00000583683 NPHP1O15259 732 aa22.48■■□□□ 1.19
NDEL1-217ENST00000583683 RAB11FIP3O75154 756 aa22.48■■□□□ 1.19
NDEL1-217ENST00000583683 IFIT5Q13325 482 aaKnown RBP22.48■■□□□ 1.19
NDEL1-217ENST00000583683 C3orf67Q6ZVT6 689 aa22.48■■□□□ 1.19
NDEL1-217ENST00000583683 SIL1Q9H173 461 aa22.48■■□□□ 1.19
NDEL1-217ENST00000583683 MMP10P09238 476 aa22.47■■□□□ 1.19
NDEL1-217ENST00000583683 ITGA6P23229 1130 aa22.47■■□□□ 1.19
NDEL1-217ENST00000583683 SF3B3Q15393 1217 aaKnown RBP22.47■■□□□ 1.19
NDEL1-217ENST00000583683 CCDC152Q4G0S7 254 aa22.47■■□□□ 1.19
NDEL1-217ENST00000583683 ZNF594Q96JF6 807 aaPredicted RBP22.47■■□□□ 1.19
NDEL1-217ENST00000583683 LRRCC1Q9C099 1032 aa22.47■■□□□ 1.19
NDEL1-217ENST00000583683 RTL9Q8NET4 1388 aa22.47■■□□□ 1.19
NDEL1-217ENST00000583683 RIC1Q4ADV7 1423 aa22.47■■□□□ 1.19
NDEL1-217ENST00000583683 SMARCA5O60264 1052 aaPredicted RBP22.46■■□□□ 1.19
NDEL1-217ENST00000583683 ANKRD18BA2A2Z9 1011 aa22.45■■□□□ 1.19
NDEL1-217ENST00000583683 PDE4AP27815 886 aa22.45■■□□□ 1.19
NDEL1-217ENST00000583683 G3BP1Q13283 466 aaKnown RBP eCLIP22.45■■□□□ 1.19
NDEL1-217ENST00000583683 OS9Q13438 667 aaPredicted RBP22.45■■□□□ 1.19
NDEL1-217ENST00000583683 RHPN1Q8TCX5 695 aa22.45■■□□□ 1.19
NDEL1-217ENST00000583683 KIF1BPQ96EK5 621 aa22.45■■□□□ 1.19
NDEL1-217ENST00000583683 NLRP3Q96P20 1036 aa22.45■■□□□ 1.19
NDEL1-217ENST00000583683 TAF1P21675 1872 aa22.44■■□□□ 1.18
NDEL1-217ENST00000583683 SASH1O94885 1247 aa22.44■■□□□ 1.18
NDEL1-217ENST00000583683 ST5P78524 1137 aa22.44■■□□□ 1.18
NDEL1-217ENST00000583683 SLC16A10Q8TF71 515 aa22.44■■□□□ 1.18
NDEL1-217ENST00000583683 ZBTB47Q9UFB7 747 aaPredicted RBP22.44■■□□□ 1.18
NDEL1-217ENST00000583683 PARP3Q9Y6F1 533 aa22.44■■□□□ 1.18
NDEL1-217ENST00000583683 RGS3P49796 1198 aa22.43■■□□□ 1.18
NDEL1-217ENST00000583683 ERC1Q8IUD2 1116 aa22.43■■□□□ 1.18
NDEL1-217ENST00000583683 SEC31BQ9NQW1 1179 aa22.43■■□□□ 1.18
NDEL1-217ENST00000583683 ANKRD31Q8N7Z5 1873 aa22.43■■□□□ 1.18
NDEL1-217ENST00000583683 ATG9AQ7Z3C6 839 aa22.43■■□□□ 1.18
NDEL1-217ENST00000583683 LRP5O75197 1615 aa22.43■■□□□ 1.18
NDEL1-217ENST00000583683 SPEF2Q9C093 1822 aa22.42■■□□□ 1.18
NDEL1-217ENST00000583683 COL4A1P02462 1669 aa22.42■■□□□ 1.18
NDEL1-217ENST00000583683 EYA2O00167 538 aa22.42■■□□□ 1.18
NDEL1-217ENST00000583683 LRRC24Q50LG9 513 aa22.42■■□□□ 1.18
NDEL1-217ENST00000583683 TAF7LQ5H9L4 462 aa22.42■■□□□ 1.18
NDEL1-217ENST00000583683 IL1RAPL2Q9NP60 686 aa22.42■■□□□ 1.18
NDEL1-217ENST00000583683 FBXO3Q9UK99 471 aa22.42■■□□□ 1.18
NDEL1-217ENST00000583683 CIAO1O76071 339 aa22.41■■□□□ 1.18
NDEL1-217ENST00000583683 C16orf71Q8IYS4 520 aaPredicted RBP22.41■■□□□ 1.18
NDEL1-217ENST00000583683 PUS3Q9BZE2 481 aaKnown RBP22.41■■□□□ 1.18
NDEL1-217ENST00000583683 BCL11AQ9H165 835 aa22.41■■□□□ 1.18
NDEL1-217ENST00000583683 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.41■■□□□ 1.18
NDEL1-217ENST00000583683 R3HDM1Q15032 1099 aaKnown RBP22.4■■□□□ 1.18
NDEL1-217ENST00000583683 IL15P40933 162 aaPredicted RBP22.39■■□□□ 1.17
NDEL1-217ENST00000583683 LDHAL6AQ6ZMR3 332 aa22.39■■□□□ 1.17
NDEL1-217ENST00000583683 CRY2Q49AN0 593 aa22.38■■□□□ 1.17
NDEL1-217ENST00000583683 RIPOR2Q9Y4F9 1068 aa22.38■■□□□ 1.17
NDEL1-217ENST00000583683 KLRG2A4D1S0 409 aaPredicted RBP22.38■■□□□ 1.17
NDEL1-217ENST00000583683 OTUD7AQ8TE49 926 aaPredicted RBP22.38■■□□□ 1.17
NDEL1-217ENST00000583683 CDC5LQ99459 802 aaKnown RBP22.38■■□□□ 1.17
NDEL1-217ENST00000583683 BRIP1Q9BX63 1249 aa22.38■■□□□ 1.17
NDEL1-217ENST00000583683 TFCP2Q12800 502 aa22.37■■□□□ 1.17
NDEL1-217ENST00000583683 CLASRPQ8N2M8 674 aaKnown RBP22.36■■□□□ 1.17
NDEL1-217ENST00000583683 SALL3Q9BXA9 1300 aa22.36■■□□□ 1.17
NDEL1-217ENST00000583683 PLEKHM2Q8IWE5 1019 aa22.36■■□□□ 1.17
NDEL1-217ENST00000583683 MPHOSPH8Q99549 860 aa22.36■■□□□ 1.17
NDEL1-217ENST00000583683 CNNM1Q9NRU3 951 aa22.36■■□□□ 1.17
NDEL1-217ENST00000583683 IGHMBP2P38935 993 aaKnown RBP22.35■■□□□ 1.17
NDEL1-217ENST00000583683 DDX46Q7L014 1031 aaKnown RBP22.35■■□□□ 1.17
NDEL1-217ENST00000583683 CELF1Q92879 486 aaKnown RBP22.35■■□□□ 1.17
NDEL1-217ENST00000583683 ZBTB7AO95365 584 aa22.34■■□□□ 1.17
NDEL1-217ENST00000583683 ANKRD18AQ8IVF6 992 aa22.34■■□□□ 1.17
NDEL1-217ENST00000583683 EAF2Q96CJ1 260 aaPredicted RBP22.34■■□□□ 1.17
NDEL1-217ENST00000583683 COL11A2P13942 1736 aaPredicted RBP22.33■■□□□ 1.17
NDEL1-217ENST00000583683 PSDA5PKW4 1024 aaPredicted RBP22.33■■□□□ 1.16
NDEL1-217ENST00000583683 RPGRQ92834 1020 aaKnown RBP22.33■■□□□ 1.16
NDEL1-217ENST00000583683 ANP32EQ9BTT0 268 aa22.33■■□□□ 1.16
NDEL1-217ENST00000583683 MTFR1LQ9H019 292 aa22.33■■□□□ 1.16
NDEL1-217ENST00000583683 CEP126Q9P2H0 1117 aa22.33■■□□□ 1.16
NDEL1-217ENST00000583683 A0A1B0GUL6 1792 aa22.33■■□□□ 1.16
NDEL1-217ENST00000583683 RPS8P62241 208 aaKnown RBP22.32■■□□□ 1.16
NDEL1-217ENST00000583683 TNNI3KQ59H18 835 aa22.32■■□□□ 1.16
NDEL1-217ENST00000583683 AACSQ86V21 672 aa22.32■■□□□ 1.16
NDEL1-217ENST00000583683 VGLL2Q8N8G2 317 aa22.32■■□□□ 1.16
NDEL1-217ENST00000583683 BSDC1Q9NW68 430 aaPredicted RBP22.32■■□□□ 1.16
NDEL1-217ENST00000583683 FPGT-TNNI3KV9GXZ4 949 aa22.32■■□□□ 1.16
NDEL1-217ENST00000583683 MX1P20591 662 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 664 ms