RNA–Protein interactions for RNA: ENST00000583277.1

SENP3-208, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 1,578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-208ENST00000583277 SKAP1Q86WV1 359 aa18.1■□□□□ 0.49
SENP3-208ENST00000583277 COL23A1Q86Y22 540 aaPredicted RBP18.1■□□□□ 0.49
SENP3-208ENST00000583277 TTLL11Q8NHH1 800 aa18.1■□□□□ 0.49
SENP3-208ENST00000583277 ANO8Q9HCE9 1232 aaPredicted RBP18.1■□□□□ 0.49
SENP3-208ENST00000583277 PA2G4Q9UQ80 394 aaKnown RBP18.1■□□□□ 0.49
SENP3-208ENST00000583277 RTL9Q8NET4 1388 aa18.1■□□□□ 0.49
SENP3-208ENST00000583277 IFIT5Q13325 482 aaKnown RBP18.09■□□□□ 0.49
SENP3-208ENST00000583277 FAM161AQ3B820 660 aa18.09■□□□□ 0.49
SENP3-208ENST00000583277 NUTM1Q86Y26 1132 aa18.09■□□□□ 0.49
SENP3-208ENST00000583277 FBXO3Q9UK99 471 aa18.09■□□□□ 0.49
SENP3-208ENST00000583277 RIC1Q4ADV7 1423 aa18.09■□□□□ 0.49
SENP3-208ENST00000583277 MSH5O43196 834 aa18.08■□□□□ 0.49
SENP3-208ENST00000583277 HCLS1P14317 486 aaPredicted RBP18.08■□□□□ 0.49
SENP3-208ENST00000583277 PDE4AP27815 886 aa18.08■□□□□ 0.49
SENP3-208ENST00000583277 ERFEQ4G0M1 354 aa18.08■□□□□ 0.49
SENP3-208ENST00000583277 CCDC152Q4G0S7 254 aa18.08■□□□□ 0.49
SENP3-208ENST00000583277 SLC10A5Q5PT55 438 aa18.08■□□□□ 0.49
SENP3-208ENST00000583277 NLGN1Q8N2Q7 840 aa18.08■□□□□ 0.49
SENP3-208ENST00000583277 RHPN1Q8TCX5 695 aa18.08■□□□□ 0.49
SENP3-208ENST00000583277 LRP5O75197 1615 aa18.08■□□□□ 0.49
SENP3-208ENST00000583277 NPHP1O15259 732 aa18.08■□□□□ 0.48
SENP3-208ENST00000583277 CNBD1Q8NA66 436 aa18.08■□□□□ 0.48
SENP3-208ENST00000583277 ABCC12Q96J65 1359 aa18.08■□□□□ 0.48
SENP3-208ENST00000583277 ANKRD18BA2A2Z9 1011 aa18.07■□□□□ 0.48
SENP3-208ENST00000583277 CIAO1O76071 339 aa18.07■□□□□ 0.48
SENP3-208ENST00000583277 TM4SF1P30408 202 aa18.07■□□□□ 0.48
SENP3-208ENST00000583277 TAF7LQ5H9L4 462 aa18.07■□□□□ 0.48
SENP3-208ENST00000583277 SIL1Q9H173 461 aa18.07■□□□□ 0.48
SENP3-208ENST00000583277 GREM2Q9H772 168 aa18.07■□□□□ 0.48
SENP3-208ENST00000583277 NRXN2Q9P2S2 1712 aa18.06■□□□□ 0.48
SENP3-208ENST00000583277 SMARCA5O60264 1052 aaPredicted RBP18.06■□□□□ 0.48
SENP3-208ENST00000583277 ITGA6P23229 1130 aa18.06■□□□□ 0.48
SENP3-208ENST00000583277 KLHDC4Q8TBB5 520 aa18.06■□□□□ 0.48
SENP3-208ENST00000583277 EYA2O00167 538 aa18.04■□□□□ 0.48
SENP3-208ENST00000583277 IL15P40933 162 aaPredicted RBP18.04■□□□□ 0.48
SENP3-208ENST00000583277 ST5P78524 1137 aa18.04■□□□□ 0.48
SENP3-208ENST00000583277 SF3B3Q15393 1217 aaKnown RBP18.04■□□□□ 0.48
SENP3-208ENST00000583277 CLASRPQ8N2M8 674 aaKnown RBP18.04■□□□□ 0.48
SENP3-208ENST00000583277 CCDC85AQ96PX6 553 aaPredicted RBP18.04■□□□□ 0.48
SENP3-208ENST00000583277 TNRC6CQ9HCJ0 1690 aaKnown RBP18.04■□□□□ 0.48
SENP3-208ENST00000583277 SERPINB2P05120 415 aa18.04■□□□□ 0.48
SENP3-208ENST00000583277 NLRP3Q96P20 1036 aa18.04■□□□□ 0.48
SENP3-208ENST00000583277 IL1RAPL2Q9NP60 686 aa18.04■□□□□ 0.48
SENP3-208ENST00000583277 SPEF2Q9C093 1822 aa18.03■□□□□ 0.48
SENP3-208ENST00000583277 POLRMTO00411 1230 aaKnown RBP18.03■□□□□ 0.48
SENP3-208ENST00000583277 SASH1O94885 1247 aa18.03■□□□□ 0.48
SENP3-208ENST00000583277 DDR1Q08345 913 aa18.03■□□□□ 0.48
SENP3-208ENST00000583277 PRR5LQ6MZQ0 368 aa18.02■□□□□ 0.48
SENP3-208ENST00000583277 PLEKHM2Q8IWE5 1019 aa18.02■□□□□ 0.48
SENP3-208ENST00000583277 ZNF594Q96JF6 807 aaPredicted RBP18.02■□□□□ 0.48
SENP3-208ENST00000583277 CDC5LQ99459 802 aaKnown RBP18.02■□□□□ 0.48
SENP3-208ENST00000583277 ATG9AQ7Z3C6 839 aa18.01■□□□□ 0.47
SENP3-208ENST00000583277 AOX1Q06278 1338 aa18.01■□□□□ 0.47
SENP3-208ENST00000583277 SALL3Q9BXA9 1300 aa18.01■□□□□ 0.47
SENP3-208ENST00000583277 MX1P20591 662 aa18■□□□□ 0.47
SENP3-208ENST00000583277 LDHAL6AQ6ZMR3 332 aa18■□□□□ 0.47
SENP3-208ENST00000583277 C16orf71Q8IYS4 520 aaPredicted RBP18■□□□□ 0.47
SENP3-208ENST00000583277 UPF1Q92900 1129 aaKnown RBP eCLIP18■□□□□ 0.47
SENP3-208ENST00000583277 BCL11AQ9H165 835 aa18■□□□□ 0.47
SENP3-208ENST00000583277 OSBPL3Q9H4L5 887 aa18■□□□□ 0.47
SENP3-208ENST00000583277 MMP10P09238 476 aa18■□□□□ 0.47
SENP3-208ENST00000583277 IFIT2P09913 472 aaKnown RBP18■□□□□ 0.47
SENP3-208ENST00000583277 IGHMBP2P38935 993 aaKnown RBP18■□□□□ 0.47
SENP3-208ENST00000583277 OTUD7AQ8TE49 926 aaPredicted RBP18■□□□□ 0.47
SENP3-208ENST00000583277 GPATCH3Q96I76 525 aa18■□□□□ 0.47
SENP3-208ENST00000583277 GPR108Q9NPR9 543 aa18■□□□□ 0.47
SENP3-208ENST00000583277 CNNM1Q9NRU3 951 aa18■□□□□ 0.47
SENP3-208ENST00000583277 PARP3Q9Y6F1 533 aa18■□□□□ 0.47
SENP3-208ENST00000583277 PDE1AP54750 535 aa17.99■□□□□ 0.47
SENP3-208ENST00000583277 TFCP2Q12800 502 aa17.99■□□□□ 0.47
SENP3-208ENST00000583277 LRRC24Q50LG9 513 aa17.99■□□□□ 0.47
SENP3-208ENST00000583277 BMP2KLQ5H9B9 411 aa17.99■□□□□ 0.47
SENP3-208ENST00000583277 C3orf67Q6ZVT6 689 aa17.99■□□□□ 0.47
SENP3-208ENST00000583277 AACSQ86V21 672 aa17.99■□□□□ 0.47
SENP3-208ENST00000583277 MPHOSPH8Q99549 860 aa17.99■□□□□ 0.47
SENP3-208ENST00000583277 STAP2Q9UGK3 403 aa17.99■□□□□ 0.47
SENP3-208ENST00000583277 ANKRD31Q8N7Z5 1873 aa17.98■□□□□ 0.47
SENP3-208ENST00000583277 SLC16A10Q8TF71 515 aa17.98■□□□□ 0.47
SENP3-208ENST00000583277 CEP126Q9P2H0 1117 aa17.98■□□□□ 0.47
SENP3-208ENST00000583277 MROH5Q6ZUA9 1318 aa17.98■□□□□ 0.47
SENP3-208ENST00000583277 ZNF609O15014 1411 aa17.98■□□□□ 0.47
SENP3-208ENST00000583277 TNNI3KQ59H18 835 aa17.97■□□□□ 0.47
SENP3-208ENST00000583277 TTC22Q5TAA0 569 aa17.97■□□□□ 0.47
SENP3-208ENST00000583277 ANKRD18AQ8IVF6 992 aa17.97■□□□□ 0.47
SENP3-208ENST00000583277 PUS3Q9BZE2 481 aaKnown RBP17.97■□□□□ 0.47
SENP3-208ENST00000583277 SEC31BQ9NQW1 1179 aa17.97■□□□□ 0.47
SENP3-208ENST00000583277 AKAP2Q9Y2D5 859 aa17.97■□□□□ 0.47
SENP3-208ENST00000583277 RIPOR2Q9Y4F9 1068 aa17.97■□□□□ 0.47
SENP3-208ENST00000583277 FPGT-TNNI3KV9GXZ4 949 aa17.97■□□□□ 0.47
SENP3-208ENST00000583277 TTC41PQ6P2S7 1318 aa17.97■□□□□ 0.47
SENP3-208ENST00000583277 A0A1B0GUL6 1792 aa17.97■□□□□ 0.47
SENP3-208ENST00000583277 METTL24Q5JXM2 366 aa17.96■□□□□ 0.47
SENP3-208ENST00000583277 MSL1Q68DK7 614 aa17.96■□□□□ 0.47
SENP3-208ENST00000583277 DDX46Q7L014 1031 aaKnown RBP17.96■□□□□ 0.47
SENP3-208ENST00000583277 CCDC24Q8N4L8 307 aa17.96■□□□□ 0.47
SENP3-208ENST00000583277 EAF2Q96CJ1 260 aaPredicted RBP17.96■□□□□ 0.47
SENP3-208ENST00000583277 TAF1P21675 1872 aa17.96■□□□□ 0.47
SENP3-208ENST00000583277 CRY2Q49AN0 593 aa17.96■□□□□ 0.46
SENP3-208ENST00000583277 ARAP2Q8WZ64 1704 aa17.95■□□□□ 0.46
SENP3-208ENST00000583277 ERC2O15083 957 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms