RNA–Protein interactions for RNA: ENST00000583173.5

TSEN54-208, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-208ENST00000583173 CTSWP56202 376 aa27.34■■□□□ 1.97
TSEN54-208ENST00000583173 EPHA10Q5JZY3 1008 aa27.34■■□□□ 1.97
TSEN54-208ENST00000583173 UTRNP46939 3433 aa27.34■■□□□ 1.97
TSEN54-208ENST00000583173 SLX4Q8IY92 1834 aa27.33■■□□□ 1.97
TSEN54-208ENST00000583173 DCAF8L1A6NGE4 600 aa27.33■■□□□ 1.97
TSEN54-208ENST00000583173 BBOX1O75936 387 aa27.32■■□□□ 1.96
TSEN54-208ENST00000583173 DDX46Q7L014 1031 aaKnown RBP27.32■■□□□ 1.96
TSEN54-208ENST00000583173 CLUAP1Q96AJ1 413 aa27.32■■□□□ 1.96
TSEN54-208ENST00000583173 LAMB2P55268 1798 aa27.32■■□□□ 1.96
TSEN54-208ENST00000583173 C21orf2O43822 256 aa27.31■■□□□ 1.96
TSEN54-208ENST00000583173 RLBP1P12271 317 aa27.31■■□□□ 1.96
TSEN54-208ENST00000583173 GRAPQ13588 217 aa27.31■■□□□ 1.96
TSEN54-208ENST00000583173 CCDC152Q4G0S7 254 aa27.31■■□□□ 1.96
TSEN54-208ENST00000583173 GRAPLQ8TC17 118 aaPredicted RBP27.31■■□□□ 1.96
TSEN54-208ENST00000583173 SUCLG2Q96I99 432 aa27.31■■□□□ 1.96
TSEN54-208ENST00000583173 SEC31BQ9NQW1 1179 aa27.31■■□□□ 1.96
TSEN54-208ENST00000583173 DZIP1LQ8IYY4 767 aaKnown RBP27.3■■□□□ 1.96
TSEN54-208ENST00000583173 TMEM57Q8N5G2 664 aa27.3■■□□□ 1.96
TSEN54-208ENST00000583173 CELF1Q92879 486 aaKnown RBP27.3■■□□□ 1.96
TSEN54-208ENST00000583173 RTL9Q8NET4 1388 aa27.3■■□□□ 1.96
TSEN54-208ENST00000583173 ARFGEF1Q9Y6D6 1849 aa27.28■■□□□ 1.96
TSEN54-208ENST00000583173 OLFM4Q6UX06 510 aa27.28■■□□□ 1.96
TSEN54-208ENST00000583173 GREM2Q9H772 168 aa27.28■■□□□ 1.96
TSEN54-208ENST00000583173 PLIN1O60240 522 aa27.27■■□□□ 1.96
TSEN54-208ENST00000583173 RPS8P62241 208 aaKnown RBP27.27■■□□□ 1.96
TSEN54-208ENST00000583173 RABL6Q3YEC7 729 aaPredicted RBP27.27■■□□□ 1.96
TSEN54-208ENST00000583173 ARHGAP27Q6ZUM4 889 aa27.27■■□□□ 1.96
TSEN54-208ENST00000583173 SLC51AQ86UW1 340 aa27.27■■□□□ 1.96
TSEN54-208ENST00000583173 CCDC85AQ96PX6 553 aaPredicted RBP27.27■■□□□ 1.96
TSEN54-208ENST00000583173 ATP6V0A2Q9Y487 856 aa27.27■■□□□ 1.96
TSEN54-208ENST00000583173 SP8Q8IXZ3 490 aa27.26■■□□□ 1.95
TSEN54-208ENST00000583173 ANKRD44Q8N8A2 993 aa27.26■■□□□ 1.95
TSEN54-208ENST00000583173 ZNF219Q9P2Y4 722 aaPredicted RBP27.26■■□□□ 1.95
TSEN54-208ENST00000583173 SNED1Q8TER0 1413 aa27.25■■□□□ 1.95
TSEN54-208ENST00000583173 COL4A1P02462 1669 aa27.25■■□□□ 1.95
TSEN54-208ENST00000583173 PPEF1O14829 653 aaPredicted RBP27.25■■□□□ 1.95
TSEN54-208ENST00000583173 CC2D2BQ6DHV5 1058 aa27.25■■□□□ 1.95
TSEN54-208ENST00000583173 LMBR1LQ6UX01 489 aa27.25■■□□□ 1.95
TSEN54-208ENST00000583173 MEIS3Q99687 375 aa27.25■■□□□ 1.95
TSEN54-208ENST00000583173 SOGA3Q5TF21 947 aa27.24■■□□□ 1.95
TSEN54-208ENST00000583173 PANK1Q8TE04 598 aa27.24■■□□□ 1.95
TSEN54-208ENST00000583173 NFKBIEO00221 500 aa27.23■■□□□ 1.95
TSEN54-208ENST00000583173 PRELPP51888 382 aa27.23■■□□□ 1.95
TSEN54-208ENST00000583173 TMC4Q7Z404 712 aa27.23■■□□□ 1.95
TSEN54-208ENST00000583173 BICC1Q9H694 974 aaKnown RBP27.23■■□□□ 1.95
TSEN54-208ENST00000583173 ZBTB7BO15156 539 aaPredicted RBP27.22■■□□□ 1.95
TSEN54-208ENST00000583173 FAM161AQ3B820 660 aa27.22■■□□□ 1.95
TSEN54-208ENST00000583173 TAF1P21675 1872 aa27.21■■□□□ 1.95
TSEN54-208ENST00000583173 MS4A1P11836 297 aa27.21■■□□□ 1.95
TSEN54-208ENST00000583173 ITGA6P23229 1130 aa27.21■■□□□ 1.95
TSEN54-208ENST00000583173 CCDC93Q567U6 631 aa27.21■■□□□ 1.95
TSEN54-208ENST00000583173 RTKN2Q8IZC4 609 aa27.21■■□□□ 1.95
TSEN54-208ENST00000583173 LTBP3Q9NS15 1303 aa27.2■■□□□ 1.95
TSEN54-208ENST00000583173 UBTFL1P0CB47 393 aaPredicted RBP27.2■■□□□ 1.94
TSEN54-208ENST00000583173 PDE3AQ14432 1141 aa27.2■■□□□ 1.94
TSEN54-208ENST00000583173 GRIPAP1Q4V328 841 aa27.2■■□□□ 1.94
TSEN54-208ENST00000583173 FTSJ3Q8IY81 847 aaKnown RBP27.2■■□□□ 1.94
TSEN54-208ENST00000583173 GNAI3P08754 354 aa27.19■■□□□ 1.94
TSEN54-208ENST00000583173 CDC5LQ99459 802 aaKnown RBP27.19■■□□□ 1.94
TSEN54-208ENST00000583173 BSDC1Q9NW68 430 aaPredicted RBP27.19■■□□□ 1.94
TSEN54-208ENST00000583173 MYH3P11055 1940 aa27.18■■□□□ 1.94
TSEN54-208ENST00000583173 C20orf194Q5TEA3 1177 aa27.18■■□□□ 1.94
TSEN54-208ENST00000583173 ANKRD18AQ8IVF6 992 aa27.18■■□□□ 1.94
TSEN54-208ENST00000583173 RASSF7Q02833 373 aa27.17■■□□□ 1.94
TSEN54-208ENST00000583173 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.17■■□□□ 1.94
TSEN54-208ENST00000583173 PSMD1Q99460 953 aa27.17■■□□□ 1.94
TSEN54-208ENST00000583173 RTFDC1Q9BY42 306 aaPredicted RBP27.17■■□□□ 1.94
TSEN54-208ENST00000583173 HDAC5Q9UQL6 1122 aa27.17■■□□□ 1.94
TSEN54-208ENST00000583173 LRRFIP2Q9Y608 721 aaKnown RBP27.17■■□□□ 1.94
TSEN54-208ENST00000583173 ANKRD18BA2A2Z9 1011 aa27.16■■□□□ 1.94
TSEN54-208ENST00000583173 FKBP4Q02790 459 aaKnown RBP eCLIP27.16■■□□□ 1.94
TSEN54-208ENST00000583173 IFIT5Q13325 482 aaKnown RBP27.16■■□□□ 1.94
TSEN54-208ENST00000583173 FER1L6Q2WGJ9 1857 aa27.15■■□□□ 1.94
TSEN54-208ENST00000583173 ITPRIPQ8IWB1 547 aa27.15■■□□□ 1.94
TSEN54-208ENST00000583173 CACNA1SQ13698 1873 aa27.15■■□□□ 1.94
TSEN54-208ENST00000583173 RFX5P48382 616 aaPredicted RBP27.14■■□□□ 1.94
TSEN54-208ENST00000583173 MVPQ14764 893 aaKnown RBP27.14■■□□□ 1.94
TSEN54-208ENST00000583173 TAOK3Q9H2K8 898 aa27.14■■□□□ 1.94
TSEN54-208ENST00000583173 MINPP1Q9UNW1 487 aa27.14■■□□□ 1.94
TSEN54-208ENST00000583173 RRP1P56182 461 aaKnown RBP27.13■■□□□ 1.93
TSEN54-208ENST00000583173 GPSM2P81274 684 aa27.13■■□□□ 1.93
TSEN54-208ENST00000583173 CCDC57Q2TAC2 916 aa27.13■■□□□ 1.93
TSEN54-208ENST00000583173 MPNDQ8N594 471 aa27.13■■□□□ 1.93
TSEN54-208ENST00000583173 ZNF594Q96JF6 807 aaPredicted RBP27.13■■□□□ 1.93
TSEN54-208ENST00000583173 PODXL2Q9NZ53 605 aa27.13■■□□□ 1.93
TSEN54-208ENST00000583173 CHMP3Q9Y3E7 222 aa27.13■■□□□ 1.93
TSEN54-208ENST00000583173 GNAI2P04899 355 aa27.12■■□□□ 1.93
TSEN54-208ENST00000583173 LMNB1P20700 586 aa27.12■■□□□ 1.93
TSEN54-208ENST00000583173 IGHMBP2P38935 993 aaKnown RBP27.12■■□□□ 1.93
TSEN54-208ENST00000583173 MTX1Q13505 466 aa27.12■■□□□ 1.93
TSEN54-208ENST00000583173 COG6Q9Y2V7 657 aa27.12■■□□□ 1.93
TSEN54-208ENST00000583173 C9orf131Q5VYM1 1079 aa27.1■■□□□ 1.93
TSEN54-208ENST00000583173 TMX4Q9H1E5 349 aaPredicted RBP27.1■■□□□ 1.93
TSEN54-208ENST00000583173 POLLQ9UGP5 575 aa27.1■■□□□ 1.93
TSEN54-208ENST00000583173 DPP8Q6V1X1 898 aaPredicted RBP27.09■■□□□ 1.93
TSEN54-208ENST00000583173 VPS33BQ9H267 617 aa27.09■■□□□ 1.93
TSEN54-208ENST00000583173 ZNF277Q9NRM2 450 aaPredicted RBP27.09■■□□□ 1.93
TSEN54-208ENST00000583173 LRRC37AA6NMS7 1700 aa27.08■■□□□ 1.93
TSEN54-208ENST00000583173 PTPN12Q05209 780 aaKnown RBP27.08■■□□□ 1.93
TSEN54-208ENST00000583173 MPHOSPH8Q99549 860 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms