RNA–Protein interactions for RNA: ENST00000582856.2

RN7SL556P-201, Transcript of RNA, 7SL, cytoplasmic 556, pseudogene, humanhuman

BASIC

Gene RN7SL556P, Length 298 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL556P-201ENST00000582856 GRM8O00222 908 aa17.37■□□□□ 0.37
RN7SL556P-201ENST00000582856 ARHGAP27Q6ZUM4 889 aa17.37■□□□□ 0.37
RN7SL556P-201ENST00000582856 PLA2G12BQ9BX93 195 aa17.37■□□□□ 0.37
RN7SL556P-201ENST00000582856 API5Q9BZZ5 524 aaKnown RBP17.37■□□□□ 0.37
RN7SL556P-201ENST00000582856 NFKBIEO00221 500 aa17.36■□□□□ 0.37
RN7SL556P-201ENST00000582856 TRIM27P14373 513 aa17.36■□□□□ 0.37
RN7SL556P-201ENST00000582856 HSP90B1P14625 803 aaKnown RBP17.36■□□□□ 0.37
RN7SL556P-201ENST00000582856 CTSWP56202 376 aa17.36■□□□□ 0.37
RN7SL556P-201ENST00000582856 DICER1Q9UPY3 1922 aaKnown RBP17.36■□□□□ 0.37
RN7SL556P-201ENST00000582856 UTYO14607 1347 aa17.36■□□□□ 0.37
RN7SL556P-201ENST00000582856 NBPF7P0C2Y1 421 aaPredicted RBP17.35■□□□□ 0.37
RN7SL556P-201ENST00000582856 PRELPP51888 382 aa17.35■□□□□ 0.37
RN7SL556P-201ENST00000582856 RASSF7Q02833 373 aa17.35■□□□□ 0.37
RN7SL556P-201ENST00000582856 GRAPQ13588 217 aa17.35■□□□□ 0.37
RN7SL556P-201ENST00000582856 ATF7IPQ6VMQ6 1270 aa17.35■□□□□ 0.37
RN7SL556P-201ENST00000582856 DDX46Q7L014 1031 aaKnown RBP17.35■□□□□ 0.37
RN7SL556P-201ENST00000582856 TTLL11Q8NHH1 800 aa17.35■□□□□ 0.37
RN7SL556P-201ENST00000582856 GRAPLQ8TC17 118 aaPredicted RBP17.35■□□□□ 0.37
RN7SL556P-201ENST00000582856 FRAT1Q92837 279 aaPredicted RBP17.35■□□□□ 0.37
RN7SL556P-201ENST00000582856 CELF1Q92879 486 aaKnown RBP17.35■□□□□ 0.37
RN7SL556P-201ENST00000582856 SEC31BQ9NQW1 1179 aa17.35■□□□□ 0.37
RN7SL556P-201ENST00000582856 PPEF1O14829 653 aaPredicted RBP17.34■□□□□ 0.37
RN7SL556P-201ENST00000582856 FOXO4P98177 505 aa17.34■□□□□ 0.37
RN7SL556P-201ENST00000582856 LTBP1Q14766 1721 aa17.34■□□□□ 0.37
RN7SL556P-201ENST00000582856 EPHA10Q5JZY3 1008 aa17.34■□□□□ 0.37
RN7SL556P-201ENST00000582856 TIAM2Q8IVF5 1701 aa17.34■□□□□ 0.37
RN7SL556P-201ENST00000582856 RTL9Q8NET4 1388 aa17.34■□□□□ 0.37
RN7SL556P-201ENST00000582856 KAZALD1Q96I82 304 aa17.34■□□□□ 0.37
RN7SL556P-201ENST00000582856 CCDC85AQ96PX6 553 aaPredicted RBP17.34■□□□□ 0.37
RN7SL556P-201ENST00000582856 C9orf78Q9NZ63 289 aaPredicted RBP17.34■□□□□ 0.37
RN7SL556P-201ENST00000582856 IPO8O15397 1037 aaKnown RBP17.33■□□□□ 0.36
RN7SL556P-201ENST00000582856 CSF1RP07333 972 aa17.33■□□□□ 0.36
RN7SL556P-201ENST00000582856 CCT4P50991 539 aaKnown RBP17.33■□□□□ 0.36
RN7SL556P-201ENST00000582856 CCDC152Q4G0S7 254 aa17.33■□□□□ 0.36
RN7SL556P-201ENST00000582856 USP44Q9H0E7 712 aa17.33■□□□□ 0.36
RN7SL556P-201ENST00000582856 BBOX1O75936 387 aa17.32■□□□□ 0.36
RN7SL556P-201ENST00000582856 CCDC93Q567U6 631 aa17.32■□□□□ 0.36
RN7SL556P-201ENST00000582856 SOGA3Q5TF21 947 aa17.32■□□□□ 0.36
RN7SL556P-201ENST00000582856 ZKSCAN2Q63HK3 967 aa17.32■□□□□ 0.36
RN7SL556P-201ENST00000582856 INTS3Q68E01 1043 aaKnown RBP17.32■□□□□ 0.36
RN7SL556P-201ENST00000582856 SUCLG2Q96I99 432 aa17.32■□□□□ 0.36
RN7SL556P-201ENST00000582856 GREM2Q9H772 168 aa17.32■□□□□ 0.36
RN7SL556P-201ENST00000582856 RCAN3Q9UKA8 241 aa17.32■□□□□ 0.36
RN7SL556P-201ENST00000582856 ATP6V0A2Q9Y487 856 aa17.32■□□□□ 0.36
RN7SL556P-201ENST00000582856 A0A1B0GUL6 1792 aa17.32■□□□□ 0.36
RN7SL556P-201ENST00000582856 DUOX1Q9NRD9 1551 aa17.32■□□□□ 0.36
RN7SL556P-201ENST00000582856 LTBP3Q9NS15 1303 aa17.31■□□□□ 0.36
RN7SL556P-201ENST00000582856 CLUAP1Q96AJ1 413 aa17.31■□□□□ 0.36
RN7SL556P-201ENST00000582856 FAM161AQ3B820 660 aa17.3■□□□□ 0.36
RN7SL556P-201ENST00000582856 SP8Q8IXZ3 490 aa17.3■□□□□ 0.36
RN7SL556P-201ENST00000582856 RLBP1P12271 317 aa17.29■□□□□ 0.36
RN7SL556P-201ENST00000582856 RPS8P62241 208 aaKnown RBP17.29■□□□□ 0.36
RN7SL556P-201ENST00000582856 CC2D2BQ6DHV5 1058 aa17.29■□□□□ 0.36
RN7SL556P-201ENST00000582856 TAOK3Q9H2K8 898 aa17.29■□□□□ 0.36
RN7SL556P-201ENST00000582856 FKBP4Q02790 459 aaKnown RBP eCLIP17.28■□□□□ 0.36
RN7SL556P-201ENST00000582856 C9orf131Q5VYM1 1079 aa17.28■□□□□ 0.36
RN7SL556P-201ENST00000582856 LMBR1LQ6UX01 489 aa17.28■□□□□ 0.36
RN7SL556P-201ENST00000582856 TMC4Q7Z404 712 aa17.28■□□□□ 0.36
RN7SL556P-201ENST00000582856 RTKN2Q8IZC4 609 aa17.28■□□□□ 0.36
RN7SL556P-201ENST00000582856 TMEM57Q8N5G2 664 aa17.28■□□□□ 0.36
RN7SL556P-201ENST00000582856 MEIS3Q99687 375 aa17.28■□□□□ 0.36
RN7SL556P-201ENST00000582856 BICC1Q9H694 974 aaKnown RBP17.28■□□□□ 0.36
RN7SL556P-201ENST00000582856 COL4A5P29400 1685 aa17.28■□□□□ 0.36
RN7SL556P-201ENST00000582856 ITGA6P23229 1130 aa17.27■□□□□ 0.36
RN7SL556P-201ENST00000582856 YY1P25490 414 aa17.27■□□□□ 0.36
RN7SL556P-201ENST00000582856 RABL6Q3YEC7 729 aaPredicted RBP17.27■□□□□ 0.36
RN7SL556P-201ENST00000582856 ANKRD44Q8N8A2 993 aa17.27■□□□□ 0.36
RN7SL556P-201ENST00000582856 PSMD1Q99460 953 aa17.27■□□□□ 0.36
RN7SL556P-201ENST00000582856 LMNB1P20700 586 aa17.26■□□□□ 0.35
RN7SL556P-201ENST00000582856 ANKRD18AQ8IVF6 992 aa17.26■□□□□ 0.35
RN7SL556P-201ENST00000582856 DZIP1LQ8IYY4 767 aaKnown RBP17.26■□□□□ 0.35
RN7SL556P-201ENST00000582856 CDC5LQ99459 802 aaKnown RBP17.26■□□□□ 0.35
RN7SL556P-201ENST00000582856 RNF181Q9P0P0 153 aa17.26■□□□□ 0.35
RN7SL556P-201ENST00000582856 GRIPAP1Q4V328 841 aa17.25■□□□□ 0.35
RN7SL556P-201ENST00000582856 ZNF277Q9NRM2 450 aaPredicted RBP17.25■□□□□ 0.35
RN7SL556P-201ENST00000582856 PLIN1O60240 522 aa17.24■□□□□ 0.35
RN7SL556P-201ENST00000582856 UBTFL1P0CB47 393 aaPredicted RBP17.24■□□□□ 0.35
RN7SL556P-201ENST00000582856 GPSM2P81274 684 aa17.24■□□□□ 0.35
RN7SL556P-201ENST00000582856 FTSJ3Q8IY81 847 aaKnown RBP17.24■□□□□ 0.35
RN7SL556P-201ENST00000582856 PANK1Q8TE04 598 aa17.24■□□□□ 0.35
RN7SL556P-201ENST00000582856 RTFDC1Q9BY42 306 aaPredicted RBP17.24■□□□□ 0.35
RN7SL556P-201ENST00000582856 CHMP3Q9Y3E7 222 aa17.24■□□□□ 0.35
RN7SL556P-201ENST00000582856 ANKRD18BA2A2Z9 1011 aa17.23■□□□□ 0.35
RN7SL556P-201ENST00000582856 IFIT5Q13325 482 aaKnown RBP17.23■□□□□ 0.35
RN7SL556P-201ENST00000582856 MPNDQ8N594 471 aa17.23■□□□□ 0.35
RN7SL556P-201ENST00000582856 BSDC1Q9NW68 430 aaPredicted RBP17.23■□□□□ 0.35
RN7SL556P-201ENST00000582856 LRRFIP2Q9Y608 721 aaKnown RBP17.23■□□□□ 0.35
RN7SL556P-201ENST00000582856 IARSP41252 1262 aaKnown RBP17.22■□□□□ 0.35
RN7SL556P-201ENST00000582856 DPP8Q6V1X1 898 aaPredicted RBP17.22■□□□□ 0.35
RN7SL556P-201ENST00000582856 ZNF594Q96JF6 807 aaPredicted RBP17.22■□□□□ 0.35
RN7SL556P-201ENST00000582856 TMX4Q9H1E5 349 aaPredicted RBP17.22■□□□□ 0.35
RN7SL556P-201ENST00000582856 MINPP1Q9UNW1 487 aa17.22■□□□□ 0.35
RN7SL556P-201ENST00000582856 IGHMBP2P38935 993 aaKnown RBP17.21■□□□□ 0.35
RN7SL556P-201ENST00000582856 CCDC57Q2TAC2 916 aa17.21■□□□□ 0.35
RN7SL556P-201ENST00000582856 PODXL2Q9NZ53 605 aa17.21■□□□□ 0.35
RN7SL556P-201ENST00000582856 POLLQ9UGP5 575 aa17.21■□□□□ 0.35
RN7SL556P-201ENST00000582856 NSFL1CQ9UNZ2 370 aaKnown RBP17.21■□□□□ 0.35
RN7SL556P-201ENST00000582856 GNAI3P08754 354 aa17.2■□□□□ 0.34
RN7SL556P-201ENST00000582856 ITPRIPQ8IWB1 547 aa17.2■□□□□ 0.34
RN7SL556P-201ENST00000582856 ZC3H4Q9UPT8 1303 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms