RNA–Protein interactions for RNA: ENST00000582717.5

GGA3-214, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-214ENST00000582717 SMAP1Q8IYB5 467 aaPredicted RBP16.29■□□□□ 0.2
GGA3-214ENST00000582717 PIBF1Q8WXW3 757 aa16.29■□□□□ 0.2
GGA3-214ENST00000582717 CCDC8Q9H0W5 538 aaPredicted RBP16.29■□□□□ 0.2
GGA3-214ENST00000582717 COPRSQ9NQ92 184 aa16.29■□□□□ 0.2
GGA3-214ENST00000582717 RPAP1Q9BWH6 1393 aaPredicted RBP16.28■□□□□ 0.2
GGA3-214ENST00000582717 HSPA4P34932 840 aa16.28■□□□□ 0.2
GGA3-214ENST00000582717 PTPN12Q05209 780 aaKnown RBP16.28■□□□□ 0.2
GGA3-214ENST00000582717 PIGBQ92521 554 aa16.28■□□□□ 0.2
GGA3-214ENST00000582717 ZBTB3Q9H5J0 574 aa16.28■□□□□ 0.2
GGA3-214ENST00000582717 ASAP1Q9ULH1 1129 aa16.28■□□□□ 0.2
GGA3-214ENST00000582717 WNK3Q9BYP7 1800 aa16.28■□□□□ 0.2
GGA3-214ENST00000582717 RAD50Q92878 1312 aa16.27■□□□□ 0.2
GGA3-214ENST00000582717 GADD45BO75293 160 aaPredicted RBP16.27■□□□□ 0.2
GGA3-214ENST00000582717 CWC27Q6UX04 472 aaKnown RBP16.27■□□□□ 0.2
GGA3-214ENST00000582717 LTBP4Q8N2S1 1624 aa16.27■□□□□ 0.19
GGA3-214ENST00000582717 H7C1W4 665 aa16.26■□□□□ 0.19
GGA3-214ENST00000582717 NOL8Q76FK4 1167 aaKnown RBP16.26■□□□□ 0.19
GGA3-214ENST00000582717 LSG1Q9H089 658 aaKnown RBP16.26■□□□□ 0.19
GGA3-214ENST00000582717 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.26■□□□□ 0.19
GGA3-214ENST00000582717 GTF2F1P35269 517 aaKnown RBP eCLIP16.26■□□□□ 0.19
GGA3-214ENST00000582717 UPF3BQ9BZI7 483 aaKnown RBP16.26■□□□□ 0.19
GGA3-214ENST00000582717 CWC25Q9NXE8 425 aaPredicted RBP16.26■□□□□ 0.19
GGA3-214ENST00000582717 ATP6V1DQ9Y5K8 247 aa16.26■□□□□ 0.19
GGA3-214ENST00000582717 UBE2HP62256 183 aa16.25■□□□□ 0.19
GGA3-214ENST00000582717 FOXO4P98177 505 aa16.25■□□□□ 0.19
GGA3-214ENST00000582717 DNTTIP2Q5QJE6 756 aaKnown RBP16.25■□□□□ 0.19
GGA3-214ENST00000582717 DNAJC10Q8IXB1 793 aa16.25■□□□□ 0.19
GGA3-214ENST00000582717 ATG3Q9NT62 314 aa16.25■□□□□ 0.19
GGA3-214ENST00000582717 ZSCAN22P10073 491 aaPredicted RBP16.25■□□□□ 0.19
GGA3-214ENST00000582717 NOLC1Q14978 699 aaKnown RBP eCLIP16.25■□□□□ 0.19
GGA3-214ENST00000582717 LMBR1LQ6UX01 489 aa16.25■□□□□ 0.19
GGA3-214ENST00000582717 EVI5LQ96CN4 794 aa16.25■□□□□ 0.19
GGA3-214ENST00000582717 CCDC94Q9BW85 323 aaPredicted RBP16.25■□□□□ 0.19
GGA3-214ENST00000582717 DIAPH3Q9NSV4 1193 aa16.25■□□□□ 0.19
GGA3-214ENST00000582717 SPTLC3Q9NUV7 552 aa16.25■□□□□ 0.19
GGA3-214ENST00000582717 GDPD2Q9HCC8 539 aa16.24■□□□□ 0.19
GGA3-214ENST00000582717 LRP6O75581 1613 aa16.24■□□□□ 0.19
GGA3-214ENST00000582717 TFCP2Q12800 502 aa16.24■□□□□ 0.19
GGA3-214ENST00000582717 USP25Q9UHP3 1055 aa16.24■□□□□ 0.19
GGA3-214ENST00000582717 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.24■□□□□ 0.19
GGA3-214ENST00000582717 ADCY5O95622 1261 aa16.23■□□□□ 0.19
GGA3-214ENST00000582717 BCL9O00512 1426 aa16.23■□□□□ 0.19
GGA3-214ENST00000582717 TCHHQ07283 1943 aa16.23■□□□□ 0.19
GGA3-214ENST00000582717 TPM3P06753 285 aa16.22■□□□□ 0.19
GGA3-214ENST00000582717 TNNI3KQ59H18 835 aa16.22■□□□□ 0.19
GGA3-214ENST00000582717 CCDC191Q8NCU4 936 aa16.22■□□□□ 0.19
GGA3-214ENST00000582717 BOLA2Q9H3K6 86 aa16.22■□□□□ 0.19
GGA3-214ENST00000582717 DBNLQ9UJU6 430 aaKnown RBP16.22■□□□□ 0.19
GGA3-214ENST00000582717 PRDM4Q9UKN5 801 aa16.22■□□□□ 0.19
GGA3-214ENST00000582717 ZNF330Q9Y3S2 320 aaPredicted RBP16.22■□□□□ 0.19
GGA3-214ENST00000582717 FPGT-TNNI3KV9GXZ4 949 aa16.22■□□□□ 0.19
GGA3-214ENST00000582717 PHLPP1O60346 1717 aa16.22■□□□□ 0.19
GGA3-214ENST00000582717 CHMP3Q9Y3E7 222 aa16.22■□□□□ 0.19
GGA3-214ENST00000582717 NRAPQ86VF7 1730 aa16.22■□□□□ 0.19
GGA3-214ENST00000582717 KAT6BQ8WYB5 2073 aa16.22■□□□□ 0.19
GGA3-214ENST00000582717 KDM4AO75164 1064 aa16.21■□□□□ 0.19
GGA3-214ENST00000582717 RUFY2Q8WXA3 655 aa16.21■□□□□ 0.19
GGA3-214ENST00000582717 TTC14Q96N46 770 aa16.21■□□□□ 0.19
GGA3-214ENST00000582717 ISCA1Q9BUE6 129 aa16.21■□□□□ 0.19
GGA3-214ENST00000582717 LIMCH1Q9UPQ0 1083 aa16.21■□□□□ 0.19
GGA3-214ENST00000582717 SNX14Q9Y5W7 946 aa16.21■□□□□ 0.19
GGA3-214ENST00000582717 STX6O43752 255 aa16.21■□□□□ 0.19
GGA3-214ENST00000582717 PTH1RQ03431 593 aa16.21■□□□□ 0.19
GGA3-214ENST00000582717 FOXD4L6Q3SYB3 417 aaPredicted RBP16.21■□□□□ 0.19
GGA3-214ENST00000582717 FOXD4L3Q6VB84 417 aaPredicted RBP16.21■□□□□ 0.19
GGA3-214ENST00000582717 RASEFQ8IZ41 740 aa16.21■□□□□ 0.19
GGA3-214ENST00000582717 SLC4A9Q96Q91 983 aa16.21■□□□□ 0.19
GGA3-214ENST00000582717 CNPY2Q9Y2B0 182 aa16.21■□□□□ 0.19
GGA3-214ENST00000582717 DOT1LQ8TEK3 1739 aa16.21■□□□□ 0.18
GGA3-214ENST00000582717 TEX13AQ9BXU3 409 aaPredicted RBP16.2■□□□□ 0.18
GGA3-214ENST00000582717 EXOC5O00471 708 aa16.2■□□□□ 0.18
GGA3-214ENST00000582717 F13A1P00488 732 aa16.2■□□□□ 0.18
GGA3-214ENST00000582717 HCLS1P14317 486 aaPredicted RBP16.2■□□□□ 0.18
GGA3-214ENST00000582717 NMIQ13287 307 aaPredicted RBP16.2■□□□□ 0.18
GGA3-214ENST00000582717 TCIRG1Q13488 830 aa16.2■□□□□ 0.18
GGA3-214ENST00000582717 FAM227BQ96M60 508 aa16.2■□□□□ 0.18
GGA3-214ENST00000582717 ADAMTS2O95450 1211 aa16.19■□□□□ 0.18
GGA3-214ENST00000582717 ATG9AQ7Z3C6 839 aa16.19■□□□□ 0.18
GGA3-214ENST00000582717 SMC3Q9UQE7 1217 aa16.19■□□□□ 0.18
GGA3-214ENST00000582717 SYT1P21579 422 aa16.19■□□□□ 0.18
GGA3-214ENST00000582717 EDC3Q96F86 508 aaKnown RBP16.19■□□□□ 0.18
GGA3-214ENST00000582717 DBNDD2Q9BQY9 259 aa16.19■□□□□ 0.18
GGA3-214ENST00000582717 FSD1Q9BTV5 496 aa16.19■□□□□ 0.18
GGA3-214ENST00000582717 FUCA2Q9BTY2 467 aa16.19■□□□□ 0.18
GGA3-214ENST00000582717 STARD3NLO95772 234 aa16.18■□□□□ 0.18
GGA3-214ENST00000582717 AK2P54819 239 aa16.18■□□□□ 0.18
GGA3-214ENST00000582717 A0A0D9SFI3 127 aa16.17■□□□□ 0.18
GGA3-214ENST00000582717 ATP5JP18859 108 aa16.17■□□□□ 0.18
GGA3-214ENST00000582717 KIF6Q6ZMV9 814 aa16.17■□□□□ 0.18
GGA3-214ENST00000582717 SYTL4Q96C24 671 aaPredicted RBP16.17■□□□□ 0.18
GGA3-214ENST00000582717 TTC12Q9H892 705 aaPredicted RBP16.17■□□□□ 0.18
GGA3-214ENST00000582717 KIF3AQ9Y496 699 aa16.17■□□□□ 0.18
GGA3-214ENST00000582717 CCDC171Q6TFL3 1326 aa16.17■□□□□ 0.18
GGA3-214ENST00000582717 HIP1O00291 1037 aa16.17■□□□□ 0.18
GGA3-214ENST00000582717 PDIA4P13667 645 aaKnown RBP16.17■□□□□ 0.18
GGA3-214ENST00000582717 ZNF594Q96JF6 807 aaPredicted RBP16.17■□□□□ 0.18
GGA3-214ENST00000582717 ZNF830Q96NB3 372 aaPredicted RBP16.17■□□□□ 0.18
GGA3-214ENST00000582717 GOLGA6L6A8MZA4 724 aa16.16■□□□□ 0.18
GGA3-214ENST00000582717 CYP19A1P11511 503 aaPredicted RBP16.16■□□□□ 0.18
GGA3-214ENST00000582717 UTP14CQ5TAP6 766 aaKnown RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms